RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	NAP1L6	A6NFF2	107 aa		8.72	□□□□□ -1.01
PSMC3-205	ENST00000528362	SCGB2A1	O75556	95 aa		8.72	□□□□□ -1.01
PSMC3-205	ENST00000528362	SLC25A6	P12236	298 aa		8.72	□□□□□ -1.01
PSMC3-205	ENST00000528362	LYL1	P12980	280 aa		8.72	□□□□□ -1.01
PSMC3-205	ENST00000528362	IL7	P13232	177 aa		8.72	□□□□□ -1.01
PSMC3-205	ENST00000528362	OR10J1	P30954	320 aa		8.72	□□□□□ -1.01
PSMC3-205	ENST00000528362	BMI1	P35226	326 aa		8.72	□□□□□ -1.01
PSMC3-205	ENST00000528362	TFPI2	P48307	235 aa		8.72	□□□□□ -1.01
PSMC3-205	ENST00000528362	CASC10	Q5T4H9	136 aa		8.72	□□□□□ -1.01
PSMC3-205	ENST00000528362	NOXA1	Q86UR1	476 aa		8.72	□□□□□ -1.01
PSMC3-205	ENST00000528362	GBGT1	Q8N5D6	347 aa		8.72	□□□□□ -1.01
PSMC3-205	ENST00000528362	OR1S2	Q8NGQ3	325 aa		8.72	□□□□□ -1.01
PSMC3-205	ENST00000528362	NPIPB3	Q92617	1050 aa		8.72	□□□□□ -1.01
PSMC3-205	ENST00000528362	FLVCR2	Q9UPI3	526 aa		8.72	□□□□□ -1.01
PSMC3-205	ENST00000528362		U3KQ87	197 aa		8.72	□□□□□ -1.01
PSMC3-205	ENST00000528362	STARD9	Q9P2P6	4700 aa		8.71	□□□□□ -1.01
PSMC3-205	ENST00000528362	C9orf170	A2RU37	121 aa		8.71	□□□□□ -1.02
PSMC3-205	ENST00000528362	DFFB	O76075	338 aa		8.71	□□□□□ -1.02
PSMC3-205	ENST00000528362	NPPC	P23582	126 aa		8.71	□□□□□ -1.02
PSMC3-205	ENST00000528362	CRYBB3	P26998	211 aa		8.71	□□□□□ -1.02
PSMC3-205	ENST00000528362	UBE2M	P61081	183 aa	Known RBP	8.71	□□□□□ -1.02
PSMC3-205	ENST00000528362	YPEL3	P61236	119 aa	Predicted RBP	8.71	□□□□□ -1.02
PSMC3-205	ENST00000528362	ETFRF1	Q6IPR1	90 aa		8.71	□□□□□ -1.02
PSMC3-205	ENST00000528362	APRG1	Q8IVJ8	170 aa		8.71	□□□□□ -1.02
PSMC3-205	ENST00000528362	ACY3	Q96HD9	319 aa		8.71	□□□□□ -1.02
PSMC3-205	ENST00000528362	METTL26	Q96S19	204 aa		8.71	□□□□□ -1.02
PSMC3-205	ENST00000528362	TMED3	Q9Y3Q3	217 aa		8.71	□□□□□ -1.02
PSMC3-205	ENST00000528362	FAM90A26	D6RGX4	464 aa		8.7	□□□□□ -1.02
PSMC3-205	ENST00000528362	IFNA4	P05014	189 aa		8.7	□□□□□ -1.02
PSMC3-205	ENST00000528362	CD5	P06127	495 aa		8.7	□□□□□ -1.02
PSMC3-205	ENST00000528362	HOXB5	P09067	269 aa		8.7	□□□□□ -1.02
PSMC3-205	ENST00000528362	IAPP	P10997	89 aa		8.7	□□□□□ -1.02
PSMC3-205	ENST00000528362	ZNF124	Q15973	351 aa		8.7	□□□□□ -1.02
PSMC3-205	ENST00000528362	GGNBP1	Q5YKI7	109 aa		8.7	□□□□□ -1.02
PSMC3-205	ENST00000528362	ZFAND6	Q6FIF0	208 aa		8.7	□□□□□ -1.02
PSMC3-205	ENST00000528362	OVOL2	Q9BRP0	275 aa		8.7	□□□□□ -1.02
PSMC3-205	ENST00000528362	MS4A6A	Q9H2W1	248 aa		8.7	□□□□□ -1.02
PSMC3-205	ENST00000528362	MAP6D1	Q9H9H5	199 aa		8.7	□□□□□ -1.02
PSMC3-205	ENST00000528362	SACS	Q9NZJ4	4579 aa		8.7	□□□□□ -1.02
PSMC3-205	ENST00000528362		A0A1W2PS18	150 aa		8.69	□□□□□ -1.02
PSMC3-205	ENST00000528362	ADAP1	O75689	374 aa		8.69	□□□□□ -1.02
PSMC3-205	ENST00000528362	TOMM40	O96008	361 aa		8.69	□□□□□ -1.02
PSMC3-205	ENST00000528362	ANXA7	P20073	488 aa	Known RBP	8.69	□□□□□ -1.02
PSMC3-205	ENST00000528362	P2RY1	P47900	373 aa		8.69	□□□□□ -1.02
PSMC3-205	ENST00000528362	APOC4	P55056	127 aa		8.69	□□□□□ -1.02
PSMC3-205	ENST00000528362	ATP5I	P56385	69 aa	Predicted RBP	8.69	□□□□□ -1.02
PSMC3-205	ENST00000528362	DHRS2	Q13268	280 aa		8.69	□□□□□ -1.02
PSMC3-205	ENST00000528362	USF2	Q15853	346 aa	Predicted RBP	8.69	□□□□□ -1.02
PSMC3-205	ENST00000528362	WFDC3	Q8IUB2	231 aa		8.69	□□□□□ -1.02
PSMC3-205	ENST00000528362	FAM24B	Q8N5W8	94 aa		8.69	□□□□□ -1.02
PSMC3-205	ENST00000528362		Q8WTZ3	238 aa		8.69	□□□□□ -1.02
PSMC3-205	ENST00000528362	C7orf50	Q9BRJ6	194 aa	Known RBP	8.69	□□□□□ -1.02
PSMC3-205	ENST00000528362	TMEM231	Q9H6L2	316 aa		8.69	□□□□□ -1.02
PSMC3-205	ENST00000528362		U3KQE9	123 aa		8.69	□□□□□ -1.02
PSMC3-205	ENST00000528362	DYNC2H1	Q8NCM8	4307 aa	Known RBP	8.68	□□□□□ -1.02
PSMC3-205	ENST00000528362	TRAV2	A0A0B4J234	112 aa		8.68	□□□□□ -1.02
PSMC3-205	ENST00000528362	KIR2DL5B	A0A0G2JN68	375 aa		8.68	□□□□□ -1.02
PSMC3-205	ENST00000528362	KIR2DL5B	A0A0G2JPC4	375 aa		8.68	□□□□□ -1.02
PSMC3-205	ENST00000528362	CENPX	A8MT69	81 aa		8.68	□□□□□ -1.02
PSMC3-205	ENST00000528362	MPTX1	A8MV57	137 aa		8.68	□□□□□ -1.02
PSMC3-205	ENST00000528362	PLA2G10	O15496	165 aa		8.68	□□□□□ -1.02
PSMC3-205	ENST00000528362	OR4E1	P0C645	316 aa		8.68	□□□□□ -1.02
PSMC3-205	ENST00000528362	RD3L	P0DJH9	198 aa		8.68	□□□□□ -1.02
PSMC3-205	ENST00000528362	RPL35A	P18077	110 aa	Known RBP	8.68	□□□□□ -1.02
PSMC3-205	ENST00000528362	RPL11	P62913	178 aa	Known RBP	8.68	□□□□□ -1.02
PSMC3-205	ENST00000528362	PAFAH1B2	P68402	229 aa		8.68	□□□□□ -1.02
PSMC3-205	ENST00000528362	GAMT	Q14353	236 aa		8.68	□□□□□ -1.02
PSMC3-205	ENST00000528362	LYG2	Q86SG7	212 aa		8.68	□□□□□ -1.02
PSMC3-205	ENST00000528362	KIR2DL5A	Q8N109	375 aa		8.68	□□□□□ -1.02
PSMC3-205	ENST00000528362	KIR2DL5B	Q8NHK3	375 aa		8.68	□□□□□ -1.02
PSMC3-205	ENST00000528362	MAGT1	Q9H0U3	335 aa		8.68	□□□□□ -1.02
PSMC3-205	ENST00000528362	RYR2	Q92736	4967 aa		8.68	□□□□□ -1.02
PSMC3-205	ENST00000528362	IGKV1D-37	A0A075B6S9	117 aa		8.67	□□□□□ -1.02
PSMC3-205	ENST00000528362	DNASE2	O00115	360 aa	Predicted RBP	8.67	□□□□□ -1.02
PSMC3-205	ENST00000528362	SYNGR2	O43760	224 aa		8.67	□□□□□ -1.02
PSMC3-205	ENST00000528362	MED6	O75586	246 aa		8.67	□□□□□ -1.02
PSMC3-205	ENST00000528362	IL4	P05112	153 aa		8.67	□□□□□ -1.02
PSMC3-205	ENST00000528362	HNRNPC	P07910	306 aa	Known RBP eCLIP	8.67	□□□□□ -1.02
PSMC3-205	ENST00000528362	PSG1	P11464	419 aa		8.67	□□□□□ -1.02
PSMC3-205	ENST00000528362	GPX4	P36969	197 aa	Predicted RBP	8.67	□□□□□ -1.02
PSMC3-205	ENST00000528362	CMC4	P56277	68 aa	Predicted RBP	8.67	□□□□□ -1.02
PSMC3-205	ENST00000528362	DEFB135	Q30KP9	77 aa		8.67	□□□□□ -1.02
PSMC3-205	ENST00000528362	C4orf46	Q504U0	113 aa		8.67	□□□□□ -1.02
PSMC3-205	ENST00000528362		Q6ZWC4	215 aa		8.67	□□□□□ -1.02
PSMC3-205	ENST00000528362	STXBP6	Q8NFX7	210 aa		8.67	□□□□□ -1.02
PSMC3-205	ENST00000528362	COQ8A	Q8NI60	647 aa		8.67	□□□□□ -1.02
PSMC3-205	ENST00000528362	GLMP	Q8WWB7	406 aa		8.67	□□□□□ -1.02
PSMC3-205	ENST00000528362	NARS2	Q96I59	477 aa	Known RBP	8.67	□□□□□ -1.02
PSMC3-205	ENST00000528362	SLC35E1	Q96K37	410 aa		8.67	□□□□□ -1.02
PSMC3-205	ENST00000528362	CIB3	Q96Q77	187 aa	Predicted RBP	8.67	□□□□□ -1.02
PSMC3-205	ENST00000528362	RABAC1	Q9UI14	185 aa		8.67	□□□□□ -1.02
PSMC3-205	ENST00000528362	PAIP2B	Q9ULR5	123 aa	Known RBP	8.67	□□□□□ -1.02
PSMC3-205	ENST00000528362	TP53TG1	Q9Y2A0	90 aa		8.67	□□□□□ -1.02
PSMC3-205	ENST00000528362	ZFP92	A6NM28	416 aa		8.66	□□□□□ -1.02
PSMC3-205	ENST00000528362	PRSS46	E5RG02	174 aa		8.66	□□□□□ -1.02
PSMC3-205	ENST00000528362		K7EQG2	157 aa		8.66	□□□□□ -1.02
PSMC3-205	ENST00000528362	WRB	O00258	174 aa		8.66	□□□□□ -1.02
PSMC3-205	ENST00000528362	UBE2C	O00762	179 aa		8.66	□□□□□ -1.02
PSMC3-205	ENST00000528362	LYRM1	O43325	122 aa		8.66	□□□□□ -1.02
PSMC3-205	ENST00000528362	DEFB131A	P59861	70 aa		8.66	□□□□□ -1.02

Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms