RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 ATPIF1Q9UII2 106 aa1.12□□□□□ -2.23
SQLE-202ENST00000518604 C19orf84I3L1E1 186 aa1.11□□□□□ -2.23
SQLE-202ENST00000518604 PGRMC1O00264 195 aaKnown RBP1.11□□□□□ -2.23
SQLE-202ENST00000518604 OR4E1P0C645 316 aa1.11□□□□□ -2.23
SQLE-202ENST00000518604 FKBP2P26885 142 aaKnown RBP1.11□□□□□ -2.23
SQLE-202ENST00000518604 CRYBA4P53673 196 aa1.11□□□□□ -2.23
SQLE-202ENST00000518604 KHDC3LQ587J8 217 aa1.11□□□□□ -2.23
SQLE-202ENST00000518604 STX12Q86Y82 276 aa1.11□□□□□ -2.23
SQLE-202ENST00000518604 BPIFA4PQ86YQ2 179 aa1.11□□□□□ -2.23
SQLE-202ENST00000518604 CLVS1Q8IUQ0 354 aaPredicted RBP1.11□□□□□ -2.23
SQLE-202ENST00000518604 SIGLECL1Q8N7X8 197 aa1.11□□□□□ -2.23
SQLE-202ENST00000518604 OR4E2Q8NGC2 313 aa1.11□□□□□ -2.23
SQLE-202ENST00000518604 OR51A2Q8NGJ7 313 aa1.11□□□□□ -2.23
SQLE-202ENST00000518604 MRPL57Q9BQC6 102 aaKnown RBP1.11□□□□□ -2.23
SQLE-202ENST00000518604 SLC50A1Q9BRV3 221 aa1.11□□□□□ -2.23
SQLE-202ENST00000518604 TMEM147Q9BVK8 224 aa1.11□□□□□ -2.23
SQLE-202ENST00000518604 ULBP3Q9BZM4 244 aa1.11□□□□□ -2.23
SQLE-202ENST00000518604 STOML2Q9UJZ1 356 aa1.11□□□□□ -2.23
SQLE-202ENST00000518604 IGKV1D-42A0A075B6H8 117 aa1.1□□□□□ -2.23
SQLE-202ENST00000518604 PDE6DO43924 150 aa1.1□□□□□ -2.23
SQLE-202ENST00000518604 OR2B3O76000 313 aa1.1□□□□□ -2.23
SQLE-202ENST00000518604 CRYZL1O95825 349 aa1.1□□□□□ -2.23
SQLE-202ENST00000518604 MIFP14174 115 aa1.1□□□□□ -2.23
SQLE-202ENST00000518604 BRS3P32247 399 aa1.1□□□□□ -2.23
SQLE-202ENST00000518604 RPL19P84098 196 aaKnown RBP1.1□□□□□ -2.23
SQLE-202ENST00000518604 OOSP2Q86WS3 158 aa1.1□□□□□ -2.23
SQLE-202ENST00000518604 HIST3H2BBQ8N257 126 aa1.1□□□□□ -2.23
SQLE-202ENST00000518604 SMIM20Q8N5G0 67 aa1.1□□□□□ -2.23
SQLE-202ENST00000518604 GDPD1Q8N9F7 314 aa1.1□□□□□ -2.23
SQLE-202ENST00000518604 OR5A1Q8NGJ0 315 aa1.1□□□□□ -2.23
SQLE-202ENST00000518604 DNAJC9Q8WXX5 260 aa1.1□□□□□ -2.23
SQLE-202ENST00000518604 BORCS7Q96B45 105 aa1.1□□□□□ -2.23
SQLE-202ENST00000518604 CMSS1Q9BQ75 279 aaKnown RBP1.1□□□□□ -2.23
SQLE-202ENST00000518604 TRIM4Q9C037 500 aa1.1□□□□□ -2.23
SQLE-202ENST00000518604 UQCC1Q9NVA1 299 aa1.1□□□□□ -2.23
SQLE-202ENST00000518604 GID8Q9NWU2 228 aa1.1□□□□□ -2.23
SQLE-202ENST00000518604 CYSLTR1Q9Y271 337 aa1.1□□□□□ -2.23
SQLE-202ENST00000518604 ERGIC3Q9Y282 383 aa1.1□□□□□ -2.23
SQLE-202ENST00000518604 ZNF106Q9H2Y7 1883 aaKnown RBP1.09□□□□□ -2.23
SQLE-202ENST00000518604 SYNMO15061 1565 aa1.09□□□□□ -2.23
SQLE-202ENST00000518604 PCDH15Q96QU1 1955 aa1.09□□□□□ -2.23
SQLE-202ENST00000518604 SCN10AQ9Y5Y9 1956 aa1.09□□□□□ -2.23
SQLE-202ENST00000518604 A0A087WX48 190 aa1.09□□□□□ -2.23
SQLE-202ENST00000518604 BUB1B-PAK6H3BSN5 160 aa1.09□□□□□ -2.23
SQLE-202ENST00000518604 PIRO00625 290 aa1.09□□□□□ -2.23
SQLE-202ENST00000518604 RBP1P09455 135 aa1.09□□□□□ -2.23
SQLE-202ENST00000518604 ASAH2BP0C7U1 165 aa1.09□□□□□ -2.23
SQLE-202ENST00000518604 BAALC-AS2P0C853 105 aa1.09□□□□□ -2.23
SQLE-202ENST00000518604 SMIM10L2AP0DMW4 78 aa1.09□□□□□ -2.23
SQLE-202ENST00000518604 SMIM10L2BP0DMW5 78 aa1.09□□□□□ -2.23
SQLE-202ENST00000518604 CRYGAP11844 174 aa1.09□□□□□ -2.23
SQLE-202ENST00000518604 SPI1P17947 270 aa1.09□□□□□ -2.23
SQLE-202ENST00000518604 HSPE1P61604 102 aaKnown RBP1.09□□□□□ -2.23
SQLE-202ENST00000518604 DR1Q01658 176 aa1.09□□□□□ -2.23
SQLE-202ENST00000518604 PDE6HQ13956 83 aa1.09□□□□□ -2.23
SQLE-202ENST00000518604 RHEBQ15382 184 aa1.09□□□□□ -2.23
SQLE-202ENST00000518604 SPA17Q15506 151 aa1.09□□□□□ -2.23
SQLE-202ENST00000518604 ANP32BQ92688 251 aaKnown RBP1.09□□□□□ -2.23
SQLE-202ENST00000518604 CEP19Q96LK0 163 aa1.09□□□□□ -2.23
SQLE-202ENST00000518604 NMNAT1Q9HAN9 279 aaPredicted RBP1.09□□□□□ -2.23
SQLE-202ENST00000518604 PARVBQ9HBI1 364 aa1.09□□□□□ -2.23
SQLE-202ENST00000518604 ENY2Q9NPA8 101 aa1.09□□□□□ -2.23
SQLE-202ENST00000518604 SS18L2Q9UHA2 77 aa1.09□□□□□ -2.23
SQLE-202ENST00000518604 FAM32AQ9Y421 112 aaKnown RBP1.09□□□□□ -2.23
SQLE-202ENST00000518604 MYH3P11055 1940 aa1.09□□□□□ -2.24
SQLE-202ENST00000518604 PLXND1Q9Y4D7 1925 aa1.09□□□□□ -2.24
SQLE-202ENST00000518604 ROCK1Q13464 1354 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 INTS1Q8N201 2190 aaKnown RBP1.08□□□□□ -2.24
SQLE-202ENST00000518604 KIF1BO60333 1816 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 MIA2Q96PC5 1412 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 COL4A5P29400 1685 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 TRAV4A0A0B4J268 109 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 MFSD11O43934 449 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 OR1I1O60431 355 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 OR2J2O76002 312 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 SERPINE1P05121 402 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 TAS2R41P59536 307 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 DEFA3P59666 94 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 CDC42P60953 191 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 GNG3P63215 75 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 POU6F1Q14863 301 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 TMED4Q7Z7H5 227 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 TRAPPC6BQ86SZ2 158 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 EXOC3-AS1Q8N2X6 119 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 LINC00311Q8N616 119 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 OR11H6Q8NGC7 330 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 CT55Q8WUE5 264 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 FAM172AQ8WUF8 416 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 PHB2Q99623 299 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 GINS3Q9BRX5 216 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 BOLA2Q9H3K6 86 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 TAS2R4Q9NYW5 299 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 OPTCQ9UBM4 332 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 KIF13BQ9NQT8 1826 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 ANKRD30AQ9BXX3 1397 aa1.08□□□□□ -2.24
SQLE-202ENST00000518604 DENND4CQ5VZ89 1909 aa1.07□□□□□ -2.24
SQLE-202ENST00000518604 H0YJX3 145 aa1.07□□□□□ -2.24
SQLE-202ENST00000518604 OR2T1O43869 369 aa1.07□□□□□ -2.24
SQLE-202ENST00000518604 IFNA1P01562 189 aa1.07□□□□□ -2.24
SQLE-202ENST00000518604 SRIP30626 198 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms