RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 SMG1Q96Q15 3661 aaKnown RBP14.41□□□□□ -0.1
CCHCR1-228ENST00000509552 LINC00310P59036 64 aa14.41□□□□□ -0.1
CCHCR1-228ENST00000509552 MRGPRG-AS1Q2M3A8 158 aa14.41□□□□□ -0.1
CCHCR1-228ENST00000509552 FXYD5Q96DB9 178 aa14.41□□□□□ -0.1
CCHCR1-228ENST00000509552 IGHV2-26A0A0B4J1V2 119 aa14.41□□□□□ -0.1
CCHCR1-228ENST00000509552 HLA-DQA1P01909 254 aa14.41□□□□□ -0.1
CCHCR1-228ENST00000509552 ORM2P19652 201 aa14.41□□□□□ -0.1
CCHCR1-228ENST00000509552 C1orf194Q5T5A4 169 aa14.41□□□□□ -0.1
CCHCR1-228ENST00000509552 SPACA3Q8IXA5 215 aa14.41□□□□□ -0.1
CCHCR1-228ENST00000509552 POLR3KQ9Y2Y1 108 aaPredicted RBP14.41□□□□□ -0.1
CCHCR1-228ENST00000509552 INSIG2Q9Y5U4 225 aa14.41□□□□□ -0.1
CCHCR1-228ENST00000509552 IZUMO1RA6ND01 250 aa14.4□□□□□ -0.1
CCHCR1-228ENST00000509552 CRYGCP07315 174 aa14.4□□□□□ -0.1
CCHCR1-228ENST00000509552 MRPL54Q6P161 138 aaKnown RBP14.4□□□□□ -0.1
CCHCR1-228ENST00000509552 OR1B1Q8NGR6 318 aa14.4□□□□□ -0.1
CCHCR1-228ENST00000509552 TBX15Q96SF7 602 aa14.4□□□□□ -0.1
CCHCR1-228ENST00000509552 TRGV9Q99603 122 aa14.4□□□□□ -0.1
CCHCR1-228ENST00000509552 VKORC1Q9BQB6 163 aa14.4□□□□□ -0.1
CCHCR1-228ENST00000509552 HSPB9Q9BQS6 159 aa14.4□□□□□ -0.1
CCHCR1-228ENST00000509552 NAV3Q8IVL0 2385 aa14.4□□□□□ -0.1
CCHCR1-228ENST00000509552 ARFGEF3Q5TH69 2177 aa14.4□□□□□ -0.1
CCHCR1-228ENST00000509552 FSTL3O95633 263 aa14.4□□□□□ -0.11
CCHCR1-228ENST00000509552 MOSP00540 346 aa14.4□□□□□ -0.11
CCHCR1-228ENST00000509552 CASP6P55212 293 aa14.4□□□□□ -0.11
CCHCR1-228ENST00000509552 USF2Q15853 346 aaPredicted RBP14.4□□□□□ -0.11
CCHCR1-228ENST00000509552 OR10J3Q5JRS4 329 aa14.4□□□□□ -0.11
CCHCR1-228ENST00000509552 FAM231DQ6ZW35 169 aa14.4□□□□□ -0.11
CCHCR1-228ENST00000509552 Q6ZWC4 215 aa14.4□□□□□ -0.11
CCHCR1-228ENST00000509552 BSNQ9UPA5 3926 aa14.39□□□□□ -0.11
CCHCR1-228ENST00000509552 A0A1B0GV90 55 aa14.39□□□□□ -0.11
CCHCR1-228ENST00000509552 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.39□□□□□ -0.11
CCHCR1-228ENST00000509552 C22orf46C9J442 243 aa14.39□□□□□ -0.11
CCHCR1-228ENST00000509552 CORTO00230 105 aa14.39□□□□□ -0.11
CCHCR1-228ENST00000509552 PLAUP00749 431 aa14.39□□□□□ -0.11
CCHCR1-228ENST00000509552 PVRIGQ6DKI7 326 aa14.39□□□□□ -0.11
CCHCR1-228ENST00000509552 C2orf88Q9BSF0 95 aa14.39□□□□□ -0.11
CCHCR1-228ENST00000509552 GNB4Q9HAV0 340 aa14.39□□□□□ -0.11
CCHCR1-228ENST00000509552 ZNF331Q9NQX6 463 aaPredicted RBP14.39□□□□□ -0.11
CCHCR1-228ENST00000509552 GVINP1Q7Z2Y8 2422 aa14.39□□□□□ -0.11
CCHCR1-228ENST00000509552 IGLV1-47P01700 117 aa14.38□□□□□ -0.11
CCHCR1-228ENST00000509552 BRS3P32247 399 aa14.38□□□□□ -0.11
CCHCR1-228ENST00000509552 SIGLECL1Q8N7X8 197 aa14.38□□□□□ -0.11
CCHCR1-228ENST00000509552 CHRDL1Q9BU40 450 aa14.38□□□□□ -0.11
CCHCR1-228ENST00000509552 CLEC7AQ9BXN2 247 aa14.38□□□□□ -0.11
CCHCR1-228ENST00000509552 SIGLEC9Q9Y336 463 aa14.38□□□□□ -0.11
CCHCR1-228ENST00000509552 TRAV34A0A0B4J273 112 aa14.38□□□□□ -0.11
CCHCR1-228ENST00000509552 F2Z2F3 143 aa14.38□□□□□ -0.11
CCHCR1-228ENST00000509552 COMPP49747 757 aaPredicted RBP14.38□□□□□ -0.11
CCHCR1-228ENST00000509552 UBE2G1P62253 170 aa14.38□□□□□ -0.11
CCHCR1-228ENST00000509552 TOMM20LQ6UXN7 152 aa14.38□□□□□ -0.11
CCHCR1-228ENST00000509552 ZNF600Q6ZNG1 722 aa14.38□□□□□ -0.11
CCHCR1-228ENST00000509552 TMEM116Q8NCL8 245 aa14.38□□□□□ -0.11
CCHCR1-228ENST00000509552 IGHV1-3A0A0C4DH29 117 aa14.37□□□□□ -0.11
CCHCR1-228ENST00000509552 KIR2DL5BA0A0G2JN68 375 aa14.37□□□□□ -0.11
CCHCR1-228ENST00000509552 KIR2DL5BA0A0G2JPC4 375 aa14.37□□□□□ -0.11
CCHCR1-228ENST00000509552 BUB1B-PAK6H3BSN5 160 aa14.37□□□□□ -0.11
CCHCR1-228ENST00000509552 CA1P00915 261 aaPredicted RBP14.37□□□□□ -0.11
CCHCR1-228ENST00000509552 CRYGBP07316 175 aa14.37□□□□□ -0.11
CCHCR1-228ENST00000509552 SNRPCP09234 159 aaKnown RBP14.37□□□□□ -0.11
CCHCR1-228ENST00000509552 CNTFRP26992 372 aa14.37□□□□□ -0.11
CCHCR1-228ENST00000509552 KIR2DL5AQ8N109 375 aa14.37□□□□□ -0.11
CCHCR1-228ENST00000509552 GRAMD2BQ96HH9 432 aa14.37□□□□□ -0.11
CCHCR1-228ENST00000509552 PIEZO2Q9H5I5 2752 aa14.37□□□□□ -0.11
CCHCR1-228ENST00000509552 HYPMO75409 117 aa14.37□□□□□ -0.11
CCHCR1-228ENST00000509552 SLC25A5P05141 298 aaKnown RBP14.37□□□□□ -0.11
CCHCR1-228ENST00000509552 MFAP2P55001 183 aa14.37□□□□□ -0.11
CCHCR1-228ENST00000509552 FOXC1Q12948 553 aa14.37□□□□□ -0.11
CCHCR1-228ENST00000509552 KIAA1644Q3SXP7 199 aa14.37□□□□□ -0.11
CCHCR1-228ENST00000509552 BLNKQ8WV28 456 aa14.37□□□□□ -0.11
CCHCR1-228ENST00000509552 SSBP3Q9BWW4 388 aaPredicted RBP14.37□□□□□ -0.11
CCHCR1-228ENST00000509552 EPDR1Q9UM22 224 aa14.37□□□□□ -0.11
CCHCR1-228ENST00000509552 APC2O95996 2303 aa14.36□□□□□ -0.11
CCHCR1-228ENST00000509552 K7ENP7 123 aa14.36□□□□□ -0.11
CCHCR1-228ENST00000509552 APCSP02743 223 aa14.36□□□□□ -0.11
CCHCR1-228ENST00000509552 APELAP0DMC3 54 aa14.36□□□□□ -0.11
CCHCR1-228ENST00000509552 CD33P20138 364 aa14.36□□□□□ -0.11
CCHCR1-228ENST00000509552 MYCNOSP40205 109 aa14.36□□□□□ -0.11
CCHCR1-228ENST00000509552 TMEM183BQ1AE95 376 aa14.36□□□□□ -0.11
CCHCR1-228ENST00000509552 RASL11AQ6T310 242 aa14.36□□□□□ -0.11
CCHCR1-228ENST00000509552 PPP1R27Q86WC6 154 aa14.36□□□□□ -0.11
CCHCR1-228ENST00000509552 FAM168AQ92567 244 aa14.36□□□□□ -0.11
CCHCR1-228ENST00000509552 ATMQ13315 3056 aa14.36□□□□□ -0.11
CCHCR1-228ENST00000509552 LYNX1G3V0Z9 82 aa14.36□□□□□ -0.11
CCHCR1-228ENST00000509552 ZNF253O75346 499 aa14.36□□□□□ -0.11
CCHCR1-228ENST00000509552 LYNX1P0DP58 116 aa14.36□□□□□ -0.11
CCHCR1-228ENST00000509552 NUDT10Q8NFP7 164 aa14.36□□□□□ -0.11
CCHCR1-228ENST00000509552 NUDT11Q96G61 164 aa14.36□□□□□ -0.11
CCHCR1-228ENST00000509552 PPIAL4CA0A0B4J2A2 164 aa14.35□□□□□ -0.11
CCHCR1-228ENST00000509552 PGPA6NDG6 321 aa14.35□□□□□ -0.11
CCHCR1-228ENST00000509552 NBEAP1P0C6P0 100 aa14.35□□□□□ -0.11
CCHCR1-228ENST00000509552 PPIAL4GP0DN37 164 aa14.35□□□□□ -0.11
CCHCR1-228ENST00000509552 HIST1H1EP10412 219 aaKnown RBP14.35□□□□□ -0.11
CCHCR1-228ENST00000509552 SRIP30626 198 aa14.35□□□□□ -0.11
CCHCR1-228ENST00000509552 DLX1P56177 255 aa14.35□□□□□ -0.11
CCHCR1-228ENST00000509552 GNG5P63218 68 aa14.35□□□□□ -0.11
CCHCR1-228ENST00000509552 RUSC1-AS1Q66K80 236 aa14.35□□□□□ -0.11
CCHCR1-228ENST00000509552 PRR27Q6MZM9 219 aa14.35□□□□□ -0.11
CCHCR1-228ENST00000509552 ZNF841Q6ZN19 808 aa14.35□□□□□ -0.11
CCHCR1-228ENST00000509552 MUC15Q8N387 334 aa14.35□□□□□ -0.11
CCHCR1-228ENST00000509552 RPEQ96AT9 228 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms