RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 CEP192Q8TEP8 1941 aa0.13□□□□□ -2.39
GYPB-209ENST00000508618 TRBV6-4A0A1B0GX49 114 aa0.13□□□□□ -2.39
GYPB-209ENST00000508618 TGOLN2O43493 480 aa0.13□□□□□ -2.39
GYPB-209ENST00000508618 OR2J2O76002 312 aa0.13□□□□□ -2.39
GYPB-209ENST00000508618 PRH1P02810 166 aa0.13□□□□□ -2.39
GYPB-209ENST00000508618 SERPINA6P08185 405 aa0.13□□□□□ -2.39
GYPB-209ENST00000508618 OR4E1P0C645 316 aa0.13□□□□□ -2.39
GYPB-209ENST00000508618 ZNF25P17030 456 aaPredicted RBP0.13□□□□□ -2.39
GYPB-209ENST00000508618 ANP32AP39687 249 aaKnown RBP0.13□□□□□ -2.39
GYPB-209ENST00000508618 RPL5P46777 297 aaKnown RBP0.13□□□□□ -2.39
GYPB-209ENST00000508618 AP3S2P59780 193 aa0.13□□□□□ -2.39
GYPB-209ENST00000508618 TPM4P67936 248 aa0.13□□□□□ -2.39
GYPB-209ENST00000508618 TSNQ15631 228 aaKnown RBP0.13□□□□□ -2.39
GYPB-209ENST00000508618 ACOT6Q3I5F7 207 aaPredicted RBP0.13□□□□□ -2.39
GYPB-209ENST00000508618 RNASE10Q5GAN6 216 aaKnown RBP0.13□□□□□ -2.39
GYPB-209ENST00000508618 FAM74A1Q5RGS3 127 aa0.13□□□□□ -2.39
GYPB-209ENST00000508618 SPOPLQ6IQ16 392 aa0.13□□□□□ -2.39
GYPB-209ENST00000508618 LINC00322Q6ZN03 302 aaPredicted RBP0.13□□□□□ -2.39
GYPB-209ENST00000508618 GKN2Q86XP6 184 aa0.13□□□□□ -2.39
GYPB-209ENST00000508618 ANKRD29Q8N6D5 301 aa0.13□□□□□ -2.39
GYPB-209ENST00000508618 LINC00301Q8NCQ3 95 aa0.13□□□□□ -2.39
GYPB-209ENST00000508618 PLAC8Q9NZF1 115 aa0.13□□□□□ -2.39
GYPB-209ENST00000508618 CYSLTR1Q9Y271 337 aa0.13□□□□□ -2.39
GYPB-209ENST00000508618 ANKRD17O75179 2603 aaKnown RBP0.12□□□□□ -2.39
GYPB-209ENST00000508618 MED1Q15648 1581 aaPredicted RBP0.12□□□□□ -2.39
GYPB-209ENST00000508618 A0A087X0T9 212 aa0.12□□□□□ -2.39
GYPB-209ENST00000508618 IGLV3-32A0A0A0MS00 114 aa0.12□□□□□ -2.39
GYPB-209ENST00000508618 CCDC160A6NGH7 325 aa0.12□□□□□ -2.39
GYPB-209ENST00000508618 M0R036 132 aa0.12□□□□□ -2.39
GYPB-209ENST00000508618 PIRO00625 290 aa0.12□□□□□ -2.39
GYPB-209ENST00000508618 CRYZL1O95825 349 aa0.12□□□□□ -2.39
GYPB-209ENST00000508618 EFNA4P52798 201 aa0.12□□□□□ -2.39
GYPB-209ENST00000508618 ESRGQ1W209 222 aa0.12□□□□□ -2.39
GYPB-209ENST00000508618 DEFB113Q30KQ7 82 aa0.12□□□□□ -2.39
GYPB-209ENST00000508618 LINC01554Q52M75 96 aa0.12□□□□□ -2.39
GYPB-209ENST00000508618 TEX261Q6UWH6 196 aa0.12□□□□□ -2.39
GYPB-209ENST00000508618 OR51D1Q8NGF3 324 aa0.12□□□□□ -2.39
GYPB-209ENST00000508618 KLK6Q92876 244 aa0.12□□□□□ -2.39
GYPB-209ENST00000508618 DCUN1D1Q96GG9 259 aa0.12□□□□□ -2.39
GYPB-209ENST00000508618 LINC00467Q9BRT7 94 aa0.12□□□□□ -2.39
GYPB-209ENST00000508618 CMTM6Q9NX76 183 aa0.12□□□□□ -2.39
GYPB-209ENST00000508618 MRPL27Q9P0M9 148 aaKnown RBP0.12□□□□□ -2.39
GYPB-209ENST00000508618 TMEM14CQ9P0S9 112 aa0.12□□□□□ -2.39
GYPB-209ENST00000508618 GUCA1BQ9UMX6 200 aa0.12□□□□□ -2.39
GYPB-209ENST00000508618 NOSIPQ9Y314 301 aaKnown RBP0.12□□□□□ -2.39
GYPB-209ENST00000508618 U3KQ87 197 aa0.12□□□□□ -2.39
GYPB-209ENST00000508618 V9GYY5 206 aaPredicted RBP0.12□□□□□ -2.39
GYPB-209ENST00000508618 KMT2CQ8NEZ4 4911 aaKnown RBP0.12□□□□□ -2.39
GYPB-209ENST00000508618 WRNQ14191 1432 aaPredicted RBP eCLIP0.12□□□□□ -2.39
GYPB-209ENST00000508618 NCOA1Q15788 1441 aa0.12□□□□□ -2.39
GYPB-209ENST00000508618 ECM29Q5VYK3 1845 aa0.11□□□□□ -2.39
GYPB-209ENST00000508618 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.11□□□□□ -2.39
GYPB-209ENST00000508618 TRAV26-2A0A0B4J265 109 aa0.11□□□□□ -2.39
GYPB-209ENST00000508618 SMIM23A6NLE4 172 aa0.11□□□□□ -2.39
GYPB-209ENST00000508618 CCL25O15444 150 aa0.11□□□□□ -2.39
GYPB-209ENST00000508618 CCL16O15467 120 aa0.11□□□□□ -2.39
GYPB-209ENST00000508618 NUPR1O60356 82 aa0.11□□□□□ -2.39
GYPB-209ENST00000508618 DHFRP00374 187 aa0.11□□□□□ -2.39
GYPB-209ENST00000508618 IFNA5P01569 189 aa0.11□□□□□ -2.39
GYPB-209ENST00000508618 IGLV3-1P01715 115 aa0.11□□□□□ -2.39
GYPB-209ENST00000508618 TTRP02766 147 aa0.11□□□□□ -2.39
GYPB-209ENST00000508618 CASP1P29466 404 aa0.11□□□□□ -2.39
GYPB-209ENST00000508618 NKX2-5P52952 324 aaPredicted RBP0.11□□□□□ -2.39
GYPB-209ENST00000508618 IAH1Q2TAA2 248 aaPredicted RBP0.11□□□□□ -2.39
GYPB-209ENST00000508618 SPINK9Q5DT21 86 aa0.11□□□□□ -2.39
GYPB-209ENST00000508618 BRMS1LQ5PSV4 323 aa0.11□□□□□ -2.39
GYPB-209ENST00000508618 KRT222Q8N1A0 295 aa0.11□□□□□ -2.39
GYPB-209ENST00000508618 OR2T10Q8NGZ9 312 aa0.11□□□□□ -2.39
GYPB-209ENST00000508618 HIST1H2BLQ99880 126 aa0.11□□□□□ -2.39
GYPB-209ENST00000508618 CCDC90BQ9GZT6 254 aa0.11□□□□□ -2.39
GYPB-209ENST00000508618 C6orf62Q9GZU0 229 aaPredicted RBP0.11□□□□□ -2.39
GYPB-209ENST00000508618 OR51V1Q9H2C8 321 aa0.11□□□□□ -2.39
GYPB-209ENST00000508618 NIT2Q9NQR4 276 aa0.11□□□□□ -2.39
GYPB-209ENST00000508618 VPS29Q9UBQ0 182 aa0.11□□□□□ -2.39
GYPB-209ENST00000508618 TAF1LQ8IZX4 1826 aa0.1□□□□□ -2.39
GYPB-209ENST00000508618 RTL1A6NKG5 1358 aa0.1□□□□□ -2.39
GYPB-209ENST00000508618 IGHV1-58A0A0C4DH39 117 aa0.1□□□□□ -2.39
GYPB-209ENST00000508618 CHP2O43745 196 aa0.1□□□□□ -2.39
GYPB-209ENST00000508618 AHSA1O95433 338 aa0.1□□□□□ -2.39
GYPB-209ENST00000508618 ZNF682O95780 498 aa0.1□□□□□ -2.39
GYPB-209ENST00000508618 TNNC2P02585 160 aa0.1□□□□□ -2.39
GYPB-209ENST00000508618 IFNA16P05015 189 aa0.1□□□□□ -2.39
GYPB-209ENST00000508618 COTL1Q14019 142 aa0.1□□□□□ -2.39
GYPB-209ENST00000508618 C2orf82Q6UX34 121 aa0.1□□□□□ -2.39
GYPB-209ENST00000508618 GDPD1Q8N9F7 314 aa0.1□□□□□ -2.39
GYPB-209ENST00000508618 TMEM254Q8TBM7 123 aa0.1□□□□□ -2.39
GYPB-209ENST00000508618 BORCS7Q96B45 105 aa0.1□□□□□ -2.39
GYPB-209ENST00000508618 PPP1R2P1Q96PQ5 205 aa0.1□□□□□ -2.39
GYPB-209ENST00000508618 GPER1Q99527 375 aa0.1□□□□□ -2.39
GYPB-209ENST00000508618 CMSS1Q9BQ75 279 aaKnown RBP0.1□□□□□ -2.39
GYPB-209ENST00000508618 ORMDL1Q9P0S3 153 aa0.1□□□□□ -2.39
GYPB-209ENST00000508618 CHCHD2Q9Y6H1 151 aaPredicted RBP0.1□□□□□ -2.39
GYPB-209ENST00000508618 FAT4Q6V0I7 4981 aa0.1□□□□□ -2.39
GYPB-209ENST00000508618 MED12Q93074 2177 aa0.09□□□□□ -2.39
GYPB-209ENST00000508618 ROBO3Q96MS0 1386 aa0.09□□□□□ -2.39
GYPB-209ENST00000508618 OR4C46A6NHA9 309 aa0.09□□□□□ -2.4
GYPB-209ENST00000508618 CLDN24A6NM45 220 aa0.09□□□□□ -2.4
GYPB-209ENST00000508618 PPIBP23284 216 aaKnown RBP0.09□□□□□ -2.4
GYPB-209ENST00000508618 OMPP47874 163 aa0.09□□□□□ -2.4
GYPB-209ENST00000508618 RPS20P60866 119 aaKnown RBP0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms