RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 PLPP4Q5VZY2 271 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 Q5XG85 94 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 LAIR2Q6ISS4 152 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 TMEM14EPQ6UXP3 125 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 DPPA3Q6W0C5 159 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 SCGB1D4Q6XE38 83 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 ACP7Q6ZNF0 438 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 SHISA6Q6ZSJ9 500 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 TMEM150AQ86TG1 271 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 PRR15Q8IV56 129 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 MSRB3Q8IXL7 192 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZIC4Q8N9L1 334 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 OR2T33Q8NG76 320 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 OR4X2Q8NGF9 303 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 OR5D14Q8NGL3 314 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 OR10AG1Q8NH19 301 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 OR10G6Q8NH81 332 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 OTOSQ8NHW6 89 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 FNDC9Q8TBE3 224 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 MYOZ3Q8TDC0 251 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 IL1F10Q8WWZ1 152 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 NEURL3Q96EH8 262 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 TVP23CQ96ET8 276 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 CNRIP1Q96F85 164 aaPredicted RBP1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 S100A16Q96FQ6 103 aaKnown RBP1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 FMC1Q96HJ9 113 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 IP6K3Q96PC2 410 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 SCGB3A2Q96PL1 93 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 RTBDNQ9BSG5 229 aaPredicted RBP1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 EMC6Q9BV81 110 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 HES7Q9BYE0 225 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 EIF5A2Q9GZV4 153 aaKnown RBP1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF226Q9NYT6 803 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 TECRQ9NZ01 308 aaKnown RBP1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 WDR83OSQ9Y284 106 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 KLHDC2Q9Y2U9 406 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 OARD1Q9Y530 152 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 CHCHD2Q9Y6H1 151 aaPredicted RBP1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 ANK1P16157 1881 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 TMEM131Q92545 1883 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 DDX60Q8IY21 1712 aaKnown RBP1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 ADAMTS7Q9UKP4 1686 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 LRRC37A3O60309 1634 aa1.51□□□□□ -2.17
HMGB3P17-201ENST00000504195 DOCK5Q9H7D0 1870 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 KIDINS220Q9ULH0 1771 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 TJP1Q07157 1748 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 NWD2Q9ULI1 1742 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 IGLV4-3A0A075B6K6 122 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 TRAV9-2A0A087WT02 112 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 A0A087WWV3 80 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 FXYD6-FXYD2A0A087WZ82 144 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 TRAV26-2A0A0B4J265 109 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 TRAV4A0A0B4J268 109 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 TRBV7-7A0A0K0K1E9 115 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 C3orf85A0A1B0GTC6 90 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 FAM236DA0A1B0GTK5 79 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 A0A1B0GWB2 263 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 TRDV1A0A1B0GX56 115 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 C5orf63A6NC05 138 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 IZUMO1RA6ND01 250 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 OR2T8A6NH00 312 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF860A6NHJ4 632 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF732B4DXR9 585 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 SMKR1H3BMG3 65 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 J3QQQ9 107 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 FCN1O00602 326 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 GEMIN2O14893 280 aaKnown RBP1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 ARPC2O15144 300 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 SOCS1O15524 211 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 SSSCA1O60232 199 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 KLF7O75840 302 aaPredicted RBP1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 SNCGO76070 127 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 NDUFB6O95139 128 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 DUSP14O95147 198 aaKnown RBP1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 CXorf1O96002 111 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 CA1P00915 261 aaPredicted RBP1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 OXTP01178 125 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 APOC2P02655 101 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 LGALS2P05162 132 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 CXCL1P09341 107 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 CECR9P0C854 216 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF286BP0CG31 522 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 PGA4P0DJD7 388 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 PGA5P0DJD9 388 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 FAM236CP0DP71 79 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 SLC25A6P12236 298 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 CD59P13987 128 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF708P17019 499 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 GABRG2P18507 467 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 GPX3P22352 226 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 NMUP48645 174 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 HINT1P49773 126 aaPredicted RBP1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF83P51522 516 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 HERVK_113P63121 156 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 MRPS36P82909 103 aaKnown RBP1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 QRFPP83859 136 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 SRSF9Q13242 221 aaKnown RBP eCLIP1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 ARFRP1Q13795 201 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 EBI3Q14213 229 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms