RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 ADAMTSL1Q8N6G6 1762 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 KIF1BO60333 1816 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 NUP205Q92621 2012 aa1.28□□□□□ -2.2
HMGB1P35-201ENST00000503360 MYH2Q9UKX2 1941 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 RALGAPA2Q2PPJ7 1873 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 HECW1Q76N89 1606 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 ERCC6Q03468 1493 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 CD109Q6YHK3 1445 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 MED23Q9ULK4 1368 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 TRGV10A0A0A0MS01 117 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 TRAV5A0A0B4J249 113 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 A0A0D9SEW6 157 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 A0A0D9SG52 128 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 TRDV1A0A1B0GX56 115 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 RFPL4AA6NLU0 287 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 GGTLC3B5MD39 225 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 C9JAW5 83 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 RFPL4AL1F8VTS6 287 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 K7EP13 123 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 PSCAO43653 123 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 SYNGR2O43760 224 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 TPST1O60507 370 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 LYZL6O75951 148 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 TNFSF15O95150 251 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 TCL1BO95988 128 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 MSMBP08118 114 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 UBBP0CG47 229 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 MPC1LP0DKB6 136 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 S100A1P23297 94 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 INSL3P51460 131 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 UBE2BP63146 152 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 FAM229BQ4G0N7 80 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 MORN2Q502X0 79 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 RPL13AP3Q6NVV1 102 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 DPPA3Q6W0C5 159 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 C2orf91Q6ZV80 131 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 LRRC28Q86X40 367 aaPredicted RBP1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 LYPD6Q86Y78 171 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 OR8I2Q8N0Y5 310 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 RPP25LQ8N5L8 163 aaKnown RBP1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 Q8NAQ8 132 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 OR2T10Q8NGZ9 312 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 C1orf54Q8WWF1 131 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 TMEM106AQ96A25 262 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 CARD19Q96LW7 228 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 IMMP2LQ96T52 175 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 HIST1H2BLQ99880 126 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 VPS25Q9BRG1 176 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 GINS4Q9BRT9 223 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 HIGD2AQ9BW72 106 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 OR2H1Q9GZK4 316 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 C16orf95Q9H693 158 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 CACYBPQ9HB71 228 aaKnown RBP1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 POPDC3Q9HBV1 291 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 NAT8Q9UHE5 227 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 EPDR1Q9UM22 224 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 HIGD1AQ9Y241 93 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 TIMM9Q9Y5J7 89 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 FAM215AQ9Y5M1 114 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 SHANK1Q9Y566 2161 aa1.27□□□□□ -2.21
HMGB1P35-201ENST00000503360 KIF13BQ9NQT8 1826 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 BICRAQ9NZM4 1560 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 TECPR2O15040 1411 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 TRGV5A0A0B4J1U4 118 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 IGHV1-58A0A0C4DH39 117 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 MDFIC2A0A1B0GVS7 189 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 C7orf71A4D174 169 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 MEIS3P1A6NDR6 274 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 C5orf58C9J3I9 102 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 H3BT86 120 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 H7BYZ3 331 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 GNRH2O43555 120 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 OR2T1O43869 369 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 DPM2O94777 84 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 OR2H2O95918 312 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 ZNF728P0DKX0 622 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 EVI2AP22794 236 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 FKBP2P26885 142 aaKnown RBP1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 SDC2P34741 201 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 RPL28P46779 137 aaKnown RBP1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 EVX1P49640 407 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 FXYD2P54710 66 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 AQP4P55087 323 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 MYL5Q02045 173 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 KISS1Q15726 138 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 AMMECR1LQ6DCA0 310 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 C22orf39Q6P5X5 142 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 HRCT1Q6UXD1 115 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 PHF5AQ7RTV0 110 aaKnown RBP1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 LHFPL1Q86WI0 220 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 TCTE3Q8IZS6 198 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 DYNAPQ8N1N2 210 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 LRRC18Q8N456 261 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 OR52R1Q8NGF1 315 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 PFN4Q8NHR9 129 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 WFDC5Q8TCV5 224 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 DCANP1Q8TF63 244 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 ADAT1Q9BUB4 502 aaKnown RBP1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 MRPL32Q9BYC8 188 aaKnown RBP1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 DUSP21Q9H596 190 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms