RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 REG1AP05451 166 aa8.14□□□□□ -1.11
HDAC3-214ENST00000495485 CRYGCP07315 174 aa8.14□□□□□ -1.11
HDAC3-214ENST00000495485 AREGP15514 252 aa8.14□□□□□ -1.11
HDAC3-214ENST00000495485 CTRB1P17538 263 aa8.14□□□□□ -1.11
HDAC3-214ENST00000495485 NPBWR1P48145 328 aa8.14□□□□□ -1.11
HDAC3-214ENST00000495485 CX3CL1P78423 397 aa8.14□□□□□ -1.11
HDAC3-214ENST00000495485 CCL20P78556 96 aa8.14□□□□□ -1.11
HDAC3-214ENST00000495485 SRSF3P84103 164 aaKnown RBP8.14□□□□□ -1.11
HDAC3-214ENST00000495485 ZNF726P1Q15940 193 aa8.14□□□□□ -1.11
HDAC3-214ENST00000495485 FAM74A3Q4VXF1 159 aa8.14□□□□□ -1.11
HDAC3-214ENST00000495485 CTRB2Q6GPI1 263 aa8.14□□□□□ -1.11
HDAC3-214ENST00000495485 PQLC2Q6ZP29 291 aa8.14□□□□□ -1.11
HDAC3-214ENST00000495485 C16orf82Q7Z2V1 217 aa8.14□□□□□ -1.11
HDAC3-214ENST00000495485 DYNAPQ8N1N2 210 aa8.14□□□□□ -1.11
HDAC3-214ENST00000495485 TTC9CQ8N5M4 171 aa8.14□□□□□ -1.11
HDAC3-214ENST00000495485 RXFP4Q8TDU9 374 aa8.14□□□□□ -1.11
HDAC3-214ENST00000495485 SLC25A33Q9BSK2 321 aa8.14□□□□□ -1.11
HDAC3-214ENST00000495485 DNAJC4Q9NNZ3 241 aa8.14□□□□□ -1.11
HDAC3-214ENST00000495485 TMEM167BQ9NRX6 74 aa8.14□□□□□ -1.11
HDAC3-214ENST00000495485 FUT9Q9Y231 359 aa8.14□□□□□ -1.11
HDAC3-214ENST00000495485 MOB4Q9Y3A3 225 aa8.14□□□□□ -1.11
HDAC3-214ENST00000495485 ARL2-SNX15V9GYD0 113 aa8.14□□□□□ -1.11
HDAC3-214ENST00000495485 TNCP24821 2201 aa8.14□□□□□ -1.11
HDAC3-214ENST00000495485 F6UZH7 168 aa8.13□□□□□ -1.11
HDAC3-214ENST00000495485 TMEM250H0YL14 139 aa8.13□□□□□ -1.11
HDAC3-214ENST00000495485 PDE6DO43924 150 aa8.13□□□□□ -1.11
HDAC3-214ENST00000495485 COX7A2P2O60397 106 aa8.13□□□□□ -1.11
HDAC3-214ENST00000495485 SRP19P09132 144 aaKnown RBP8.13□□□□□ -1.11
HDAC3-214ENST00000495485 STAG3L2P0CL84 134 aa8.13□□□□□ -1.11
HDAC3-214ENST00000495485 STAG3L3P0CL85 134 aa8.13□□□□□ -1.11
HDAC3-214ENST00000495485 CD24P25063 80 aa8.13□□□□□ -1.11
HDAC3-214ENST00000495485 RND2P52198 227 aa8.13□□□□□ -1.11
HDAC3-214ENST00000495485 FGF8P55075 233 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-214ENST00000495485 MEF2BQ02080 365 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-214ENST00000495485 ICAM4Q14773 271 aa8.13□□□□□ -1.11
HDAC3-214ENST00000495485 FAM78BQ5VT40 261 aa8.13□□□□□ -1.11
HDAC3-214ENST00000495485 Q8N9W7 124 aa8.13□□□□□ -1.11
HDAC3-214ENST00000495485 STXBP6Q8NFX7 210 aa8.13□□□□□ -1.11
HDAC3-214ENST00000495485 OR4X1Q8NH49 305 aa8.13□□□□□ -1.11
HDAC3-214ENST00000495485 OR2T6Q8NHC8 308 aa8.13□□□□□ -1.11
HDAC3-214ENST00000495485 ZNF418Q8TF45 676 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-214ENST00000495485 RBM14Q96PK6 669 aaKnown RBP8.13□□□□□ -1.11
HDAC3-214ENST00000495485 RARRES2Q99969 163 aa8.13□□□□□ -1.11
HDAC3-214ENST00000495485 NIPSNAP3BQ9BS92 247 aa8.13□□□□□ -1.11
HDAC3-214ENST00000495485 GAR1Q9NY12 217 aaKnown RBP8.13□□□□□ -1.11
HDAC3-214ENST00000495485 PRELID1Q9Y255 219 aa8.13□□□□□ -1.11
HDAC3-214ENST00000495485 B4DEV8 164 aa8.12□□□□□ -1.11
HDAC3-214ENST00000495485 YIF1AO95070 293 aa8.12□□□□□ -1.11
HDAC3-214ENST00000495485 LINC00869P0C866 280 aa8.12□□□□□ -1.11
HDAC3-214ENST00000495485 MFAP4P55083 255 aa8.12□□□□□ -1.11
HDAC3-214ENST00000495485 PNRC1Q12796 327 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-214ENST00000495485 KRTAP21-3Q3LHN1 58 aa8.12□□□□□ -1.11
HDAC3-214ENST00000495485 C10orf113Q5VZT2 155 aa8.12□□□□□ -1.11
HDAC3-214ENST00000495485 PIP4P2Q8N4L2 257 aa8.12□□□□□ -1.11
HDAC3-214ENST00000495485 SGMS2Q8NHU3 365 aa8.12□□□□□ -1.11
HDAC3-214ENST00000495485 UHRF2Q96PU4 802 aa8.12□□□□□ -1.11
HDAC3-214ENST00000495485 TXN2Q99757 166 aa8.12□□□□□ -1.11
HDAC3-214ENST00000495485 SSX3Q99909 188 aa8.12□□□□□ -1.11
HDAC3-214ENST00000495485 SCRT1Q9BWW7 348 aa8.12□□□□□ -1.11
HDAC3-214ENST00000495485 FNDC4Q9H6D8 234 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-214ENST00000495485 TNFRSF19Q9NS68 423 aa8.12□□□□□ -1.11
HDAC3-214ENST00000495485 M0R036 132 aa8.11□□□□□ -1.11
HDAC3-214ENST00000495485 OR5G3P0C626 314 aa8.11□□□□□ -1.11
HDAC3-214ENST00000495485 C8orf88P0DMB2 117 aa8.11□□□□□ -1.11
HDAC3-214ENST00000495485 CEBPGP53567 150 aa8.11□□□□□ -1.11
HDAC3-214ENST00000495485 RHEBQ15382 184 aa8.11□□□□□ -1.11
HDAC3-214ENST00000495485 MLANAQ16655 118 aa8.11□□□□□ -1.11
HDAC3-214ENST00000495485 UNQ5815/PRO19632Q6UWF5 114 aa8.11□□□□□ -1.11
HDAC3-214ENST00000495485 Q71RC1 249 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-214ENST00000495485 TMEM86BQ8N661 226 aa8.11□□□□□ -1.11
HDAC3-214ENST00000495485 CLRN3Q8NCR9 226 aa8.11□□□□□ -1.11
HDAC3-214ENST00000495485 C17orf50Q8WW18 174 aa8.11□□□□□ -1.11
HDAC3-214ENST00000495485 TMEM190Q8WZ59 177 aa8.11□□□□□ -1.11
HDAC3-214ENST00000495485 TVP23CQ96ET8 276 aa8.11□□□□□ -1.11
HDAC3-214ENST00000495485 AJUBAQ96IF1 538 aa8.11□□□□□ -1.11
HDAC3-214ENST00000495485 ZNF48Q96MX3 618 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-214ENST00000495485 PRDM13Q9H4Q3 707 aa8.11□□□□□ -1.11
HDAC3-214ENST00000495485 IGHV7-81A0A0B4J1V7 117 aa8.1□□□□□ -1.11
HDAC3-214ENST00000495485 A0A0U1RQK1 487 aa8.1□□□□□ -1.11
HDAC3-214ENST00000495485 I3L2K1 104 aa8.1□□□□□ -1.11
HDAC3-214ENST00000495485 TCF21O43680 179 aa8.1□□□□□ -1.11
HDAC3-214ENST00000495485 GNG7O60262 68 aa8.1□□□□□ -1.11
HDAC3-214ENST00000495485 HYPMO75409 117 aa8.1□□□□□ -1.11
HDAC3-214ENST00000495485 AVPP01185 164 aa8.1□□□□□ -1.11
HDAC3-214ENST00000495485 ARL14EPLP0DKL9 152 aa8.1□□□□□ -1.11
HDAC3-214ENST00000495485 APELAP0DMC3 54 aa8.1□□□□□ -1.11
HDAC3-214ENST00000495485 ADCYAP1P18509 176 aa8.1□□□□□ -1.11
HDAC3-214ENST00000495485 GCHFRP30047 84 aa8.1□□□□□ -1.11
HDAC3-214ENST00000495485 PLP1P60201 277 aa8.1□□□□□ -1.11
HDAC3-214ENST00000495485 AKIRIN2Q53H80 203 aa8.1□□□□□ -1.11
HDAC3-214ENST00000495485 SSX7Q7RTT5 188 aa8.1□□□□□ -1.11
HDAC3-214ENST00000495485 OR4F5Q8NH21 305 aa8.1□□□□□ -1.11
HDAC3-214ENST00000495485 FAM110DQ8TAY7 271 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-214ENST00000495485 VN1R17PQ8TDU5 208 aa8.1□□□□□ -1.11
HDAC3-214ENST00000495485 OR4F4Q96R69 305 aa8.1□□□□□ -1.11
HDAC3-214ENST00000495485 STAB1Q9NY15 2570 aa8.09□□□□□ -1.11
HDAC3-214ENST00000495485 IGLV11-55A0A075B6I3 123 aa8.09□□□□□ -1.11
HDAC3-214ENST00000495485 IGKV1OR2-108A0A075B7D4 117 aa8.09□□□□□ -1.11
HDAC3-214ENST00000495485 C11orf94C9JXX5 98 aa8.09□□□□□ -1.11
HDAC3-214ENST00000495485 CLDN34H7C241 214 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms