RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 DEFA4P12838 97 aa9.32□□□□□ -0.92
RFC4-214ENST00000494047 CBLN1P23435 193 aa9.32□□□□□ -0.92
RFC4-214ENST00000494047 UBE2G1P62253 170 aa9.32□□□□□ -0.92
RFC4-214ENST00000494047 MSMPQ1L6U9 139 aa9.32□□□□□ -0.92
RFC4-214ENST00000494047 OR8I2Q8N0Y5 310 aa9.32□□□□□ -0.92
RFC4-214ENST00000494047 FMC1Q96HJ9 113 aa9.32□□□□□ -0.92
RFC4-214ENST00000494047 TBX15Q96SF7 602 aa9.32□□□□□ -0.92
RFC4-214ENST00000494047 HECTD1Q9ULT8 2610 aa9.32□□□□□ -0.92
RFC4-214ENST00000494047 GGTLC3B5MD39 225 aa9.31□□□□□ -0.92
RFC4-214ENST00000494047 TMEM178BH3BS89 294 aa9.31□□□□□ -0.92
RFC4-214ENST00000494047 PEX7O00628 323 aa9.31□□□□□ -0.92
RFC4-214ENST00000494047 SERF1AO75920 110 aa9.31□□□□□ -0.92
RFC4-214ENST00000494047 TFF1P04155 84 aa9.31□□□□□ -0.92
RFC4-214ENST00000494047 S100A7P31151 101 aa9.31□□□□□ -0.92
RFC4-214ENST00000494047 PLP1P60201 277 aa9.31□□□□□ -0.92
RFC4-214ENST00000494047 SUMO1P63165 101 aaKnown RBP9.31□□□□□ -0.92
RFC4-214ENST00000494047 CLEC12BQ2HXU8 276 aa9.31□□□□□ -0.92
RFC4-214ENST00000494047 SPATA31B1PQ5VZV4 182 aa9.31□□□□□ -0.92
RFC4-214ENST00000494047 TMEM136Q6ZRR5 245 aa9.31□□□□□ -0.92
RFC4-214ENST00000494047 ZCCHC24Q8N2G6 241 aaKnown RBP9.31□□□□□ -0.92
RFC4-214ENST00000494047 FAM216BQ8N7L0 139 aa9.31□□□□□ -0.92
RFC4-214ENST00000494047 BORCS7Q96B45 105 aa9.31□□□□□ -0.92
RFC4-214ENST00000494047 PLPPR2Q96GM1 343 aa9.31□□□□□ -0.92
RFC4-214ENST00000494047 MRPL20Q9BYC9 149 aaKnown RBP9.31□□□□□ -0.92
RFC4-214ENST00000494047 POLR3KQ9Y2Y1 108 aaPredicted RBP9.31□□□□□ -0.92
RFC4-214ENST00000494047 DSCAMO60469 2012 aa9.31□□□□□ -0.92
RFC4-214ENST00000494047 PGPEP1LA6NFU8 196 aa9.3□□□□□ -0.92
RFC4-214ENST00000494047 ZNF324O75467 553 aaPredicted RBP9.3□□□□□ -0.92
RFC4-214ENST00000494047 OR2J3O76001 311 aa9.3□□□□□ -0.92
RFC4-214ENST00000494047 APCSP02743 223 aa9.3□□□□□ -0.92
RFC4-214ENST00000494047 IGKV1-16P04430 117 aa9.3□□□□□ -0.92
RFC4-214ENST00000494047 GPX1P07203 203 aa9.3□□□□□ -0.92
RFC4-214ENST00000494047 SELLP14151 372 aa9.3□□□□□ -0.92
RFC4-214ENST00000494047 PMCHP20382 165 aa9.3□□□□□ -0.92
RFC4-214ENST00000494047 PRRX1P54821 245 aa9.3□□□□□ -0.92
RFC4-214ENST00000494047 TPTE2P1Q5T6R2 138 aa9.3□□□□□ -0.92
RFC4-214ENST00000494047 TMEM256Q8N2U0 113 aa9.3□□□□□ -0.92
RFC4-214ENST00000494047 C5orf17Q8NAS9 161 aa9.3□□□□□ -0.92
RFC4-214ENST00000494047 TSKUQ8WUA8 353 aa9.3□□□□□ -0.92
RFC4-214ENST00000494047 FAM167A-AS1Q96KT0 104 aa9.3□□□□□ -0.92
RFC4-214ENST00000494047 HSPB9Q9BQS6 159 aa9.3□□□□□ -0.92
RFC4-214ENST00000494047 SLC25A2Q9BXI2 301 aa9.3□□□□□ -0.92
RFC4-214ENST00000494047 ZNF492Q9P255 531 aa9.3□□□□□ -0.92
RFC4-214ENST00000494047 ZNF835Q9Y2P0 537 aa9.3□□□□□ -0.92
RFC4-214ENST00000494047 PCNX1Q96RV3 2341 aa9.3□□□□□ -0.92
RFC4-214ENST00000494047 DYSFO75923 2080 aa9.3□□□□□ -0.92
RFC4-214ENST00000494047 RAI1Q7Z5J4 1906 aaPredicted RBP9.3□□□□□ -0.92
RFC4-214ENST00000494047 IGKV1OR2-108A0A075B7D4 117 aa9.29□□□□□ -0.92
RFC4-214ENST00000494047 TRBV6-1A0A0K0K1D8 114 aa9.29□□□□□ -0.92
RFC4-214ENST00000494047 A8MWL6 223 aa9.29□□□□□ -0.92
RFC4-214ENST00000494047 SCGB2A1O75556 95 aa9.29□□□□□ -0.92
RFC4-214ENST00000494047 RPLP1P05386 114 aaKnown RBP9.29□□□□□ -0.92
RFC4-214ENST00000494047 CRYGCP07315 174 aa9.29□□□□□ -0.92
RFC4-214ENST00000494047 MGST1P10620 155 aaKnown RBP9.29□□□□□ -0.92
RFC4-214ENST00000494047 GAGE1Q13065 139 aa9.29□□□□□ -0.92
RFC4-214ENST00000494047 KLF5Q13887 457 aaPredicted RBP9.29□□□□□ -0.92
RFC4-214ENST00000494047 ADIPOQQ15848 244 aa9.29□□□□□ -0.92
RFC4-214ENST00000494047 TMEM116Q8NCL8 245 aa9.29□□□□□ -0.92
RFC4-214ENST00000494047 LEAP2Q969E1 77 aa9.29□□□□□ -0.92
RFC4-214ENST00000494047 ATG101Q9BSB4 218 aa9.29□□□□□ -0.92
RFC4-214ENST00000494047 ZNF355PQ9NSJ1 428 aa9.29□□□□□ -0.92
RFC4-214ENST00000494047 JKAMPQ9P055 326 aa9.29□□□□□ -0.92
RFC4-214ENST00000494047 KLF12Q9Y4X4 402 aa9.29□□□□□ -0.92
RFC4-214ENST00000494047 A0A1B0GV90 55 aa9.28□□□□□ -0.92
RFC4-214ENST00000494047 A0A1B0GW15 77 aa9.28□□□□□ -0.92
RFC4-214ENST00000494047 FBLL1A6NHQ2 334 aaKnown RBP9.28□□□□□ -0.92
RFC4-214ENST00000494047 SRRM4A7MD48 611 aaKnown RBP9.28□□□□□ -0.92
RFC4-214ENST00000494047 SLC17A3O00476 420 aa9.28□□□□□ -0.92
RFC4-214ENST00000494047 FOXH1O75593 365 aa9.28□□□□□ -0.92
RFC4-214ENST00000494047 AMTP48728 403 aa9.28□□□□□ -0.92
RFC4-214ENST00000494047 TMEM155Q4W5P6 130 aa9.28□□□□□ -0.92
RFC4-214ENST00000494047 C1orf229Q6ZS94 237 aaPredicted RBP9.28□□□□□ -0.92
RFC4-214ENST00000494047 DEFB108BQ8NET1 73 aa9.28□□□□□ -0.92
RFC4-214ENST00000494047 ST6GALNAC6Q969X2 333 aa9.28□□□□□ -0.92
RFC4-214ENST00000494047 ZNF503Q96F45 646 aa9.28□□□□□ -0.92
RFC4-214ENST00000494047 GPR82Q96P67 336 aa9.28□□□□□ -0.92
RFC4-214ENST00000494047 SERTAD4Q9NUC0 356 aa9.28□□□□□ -0.92
RFC4-214ENST00000494047 AURKAIP1Q9NWT8 199 aaPredicted RBP9.28□□□□□ -0.92
RFC4-214ENST00000494047 TMEM14CQ9P0S9 112 aa9.28□□□□□ -0.92
RFC4-214ENST00000494047 UQCR10Q9UDW1 63 aa9.28□□□□□ -0.92
RFC4-214ENST00000494047 TBL2Q9Y4P3 447 aaKnown RBP9.28□□□□□ -0.92
RFC4-214ENST00000494047 GRIFINA4D1Z8 144 aa9.27□□□□□ -0.93
RFC4-214ENST00000494047 B9A039 149 aa9.27□□□□□ -0.93
RFC4-214ENST00000494047 K7EQM0 130 aa9.27□□□□□ -0.93
RFC4-214ENST00000494047 CCL21O00585 134 aa9.27□□□□□ -0.93
RFC4-214ENST00000494047 TCAPO15273 167 aa9.27□□□□□ -0.93
RFC4-214ENST00000494047 IGLV2-8P01709 118 aa9.27□□□□□ -0.93
RFC4-214ENST00000494047 CHRNB4P30926 498 aa9.27□□□□□ -0.93
RFC4-214ENST00000494047 RPL27AP46776 148 aaKnown RBP9.27□□□□□ -0.93
RFC4-214ENST00000494047 TMEM200BQ69YZ2 307 aa9.27□□□□□ -0.93
RFC4-214ENST00000494047 Q6AWC8 147 aa9.27□□□□□ -0.93
RFC4-214ENST00000494047 Q6ZWC4 215 aa9.27□□□□□ -0.93
RFC4-214ENST00000494047 ZNF329Q86UD4 541 aa9.27□□□□□ -0.93
RFC4-214ENST00000494047 DOLPP1Q86YN1 238 aa9.27□□□□□ -0.93
RFC4-214ENST00000494047 LYPD1Q8N2G4 141 aa9.27□□□□□ -0.93
RFC4-214ENST00000494047 MBD6Q96DN6 1003 aa9.27□□□□□ -0.93
RFC4-214ENST00000494047 MISP3Q96FF7 219 aa9.27□□□□□ -0.93
RFC4-214ENST00000494047 TMEM68Q96MH6 324 aa9.27□□□□□ -0.93
RFC4-214ENST00000494047 TMEM133Q9H2Q1 129 aa9.27□□□□□ -0.93
RFC4-214ENST00000494047 GNB4Q9HAV0 340 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms