RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 KMT2AQ03164 3969 aa9.27□□□□□ -0.93
HSPG2-212ENST00000493940 A0A0J9YWU9 116 aa9.26□□□□□ -0.93
HSPG2-212ENST00000493940 SPRY2O43597 315 aa9.26□□□□□ -0.93
HSPG2-212ENST00000493940 NPY1RP25929 384 aa9.26□□□□□ -0.93
HSPG2-212ENST00000493940 PPP1R1AQ13522 171 aa9.26□□□□□ -0.93
HSPG2-212ENST00000493940 USF2Q15853 346 aaPredicted RBP9.26□□□□□ -0.93
HSPG2-212ENST00000493940 TMEM128Q5BJH2 165 aa9.26□□□□□ -0.93
HSPG2-212ENST00000493940 LEMD1Q68G75 181 aa9.26□□□□□ -0.93
HSPG2-212ENST00000493940 Q6ZWC4 215 aa9.26□□□□□ -0.93
HSPG2-212ENST00000493940 LGI3Q8N145 548 aa9.26□□□□□ -0.93
HSPG2-212ENST00000493940 DTD1Q8TEA8 209 aa9.26□□□□□ -0.93
HSPG2-212ENST00000493940 RNF183Q96D59 192 aa9.26□□□□□ -0.93
HSPG2-212ENST00000493940 GINS3Q9BRX5 216 aa9.26□□□□□ -0.93
HSPG2-212ENST00000493940 FLVCR2Q9UPI3 526 aa9.26□□□□□ -0.93
HSPG2-212ENST00000493940 IGKV1D-37A0A075B6S9 117 aa9.25□□□□□ -0.93
HSPG2-212ENST00000493940 MPTX1A8MV57 137 aa9.25□□□□□ -0.93
HSPG2-212ENST00000493940 ZNF701M0R085 212 aaPredicted RBP9.25□□□□□ -0.93
HSPG2-212ENST00000493940 GIG44P09565 113 aaPredicted RBP9.25□□□□□ -0.93
HSPG2-212ENST00000493940 NPPCP23582 126 aa9.25□□□□□ -0.93
HSPG2-212ENST00000493940 OR10J1P30954 320 aa9.25□□□□□ -0.93
HSPG2-212ENST00000493940 S100A5P33763 92 aa9.25□□□□□ -0.93
HSPG2-212ENST00000493940 BTCP35070 178 aa9.25□□□□□ -0.93
HSPG2-212ENST00000493940 DEFB131AP59861 70 aa9.25□□□□□ -0.93
HSPG2-212ENST00000493940 STPG3Q8N7X2 389 aa9.25□□□□□ -0.93
HSPG2-212ENST00000493940 LRTM2Q8N967 370 aa9.25□□□□□ -0.93
HSPG2-212ENST00000493940 RNASEH2CQ8TDP1 164 aaKnown RBP9.25□□□□□ -0.93
HSPG2-212ENST00000493940 SCGB3A2Q96PL1 93 aa9.25□□□□□ -0.93
HSPG2-212ENST00000493940 KIR2DL5BA0A0G2JN68 375 aa9.24□□□□□ -0.93
HSPG2-212ENST00000493940 KIR2DL5BA0A0G2JPC4 375 aa9.24□□□□□ -0.93
HSPG2-212ENST00000493940 K7EQG2 157 aa9.24□□□□□ -0.93
HSPG2-212ENST00000493940 SFT2D2O95562 160 aa9.24□□□□□ -0.93
HSPG2-212ENST00000493940 IFNA10P01566 189 aa9.24□□□□□ -0.93
HSPG2-212ENST00000493940 IAPPP10997 89 aa9.24□□□□□ -0.93
HSPG2-212ENST00000493940 P2RY1P47900 373 aa9.24□□□□□ -0.93
HSPG2-212ENST00000493940 YPEL3P61236 119 aaPredicted RBP9.24□□□□□ -0.93
HSPG2-212ENST00000493940 GAMTQ14353 236 aa9.24□□□□□ -0.93
HSPG2-212ENST00000493940 LYG2Q86SG7 212 aa9.24□□□□□ -0.93
HSPG2-212ENST00000493940 KIR2DL5AQ8N109 375 aa9.24□□□□□ -0.93
HSPG2-212ENST00000493940 KIR2DL5BQ8NHK3 375 aa9.24□□□□□ -0.93
HSPG2-212ENST00000493940 IL17DQ8TAD2 202 aa9.24□□□□□ -0.93
HSPG2-212ENST00000493940 DCANP1Q8TF63 244 aa9.24□□□□□ -0.93
HSPG2-212ENST00000493940 GLMPQ8WWB7 406 aa9.24□□□□□ -0.93
HSPG2-212ENST00000493940 ACY3Q96HD9 319 aa9.24□□□□□ -0.93
HSPG2-212ENST00000493940 MAGT1Q9H0U3 335 aa9.24□□□□□ -0.93
HSPG2-212ENST00000493940 VPS13DQ5THJ4 4388 aa9.24□□□□□ -0.93
HSPG2-212ENST00000493940 IGKV1OR2-108A0A075B7D4 117 aa9.23□□□□□ -0.93
HSPG2-212ENST00000493940 TRAV30A0A087WSZ9 112 aa9.23□□□□□ -0.93
HSPG2-212ENST00000493940 LINC00854A0A1B0GVQ3 168 aa9.23□□□□□ -0.93
HSPG2-212ENST00000493940 HOXB5P09067 269 aa9.23□□□□□ -0.93
HSPG2-212ENST00000493940 PSG1P11464 419 aa9.23□□□□□ -0.93
HSPG2-212ENST00000493940 VAMP1P23763 118 aa9.23□□□□□ -0.93
HSPG2-212ENST00000493940 FAUP35544 74 aaKnown RBP9.23□□□□□ -0.93
HSPG2-212ENST00000493940 APOC4P55056 127 aa9.23□□□□□ -0.93
HSPG2-212ENST00000493940 RPL11P62913 178 aaKnown RBP9.23□□□□□ -0.93
HSPG2-212ENST00000493940 ZNF90Q03938 601 aa9.23□□□□□ -0.93
HSPG2-212ENST00000493940 C16orf54Q6UWD8 224 aa9.23□□□□□ -0.93
HSPG2-212ENST00000493940 OR1S2Q8NGQ3 325 aa9.23□□□□□ -0.93
HSPG2-212ENST00000493940 OR1S1Q8NH92 325 aa9.23□□□□□ -0.93
HSPG2-212ENST00000493940 CSTL1Q9H114 145 aa9.23□□□□□ -0.93
HSPG2-212ENST00000493940 RABAC1Q9UI14 185 aa9.23□□□□□ -0.93
HSPG2-212ENST00000493940 TP53TG1Q9Y2A0 90 aa9.23□□□□□ -0.93
HSPG2-212ENST00000493940 U3KQ87 197 aa9.23□□□□□ -0.93
HSPG2-212ENST00000493940 RPS10-NUDT3A0A1W2PQS6 291 aa9.22□□□□□ -0.93
HSPG2-212ENST00000493940 KNCNA6PVL3 124 aa9.22□□□□□ -0.93
HSPG2-212ENST00000493940 PRSS46E5RG02 174 aa9.22□□□□□ -0.93
HSPG2-212ENST00000493940 DNASE2O00115 360 aaPredicted RBP9.22□□□□□ -0.93
HSPG2-212ENST00000493940 UBE2CO00762 179 aa9.22□□□□□ -0.93
HSPG2-212ENST00000493940 ADAP1O75689 374 aa9.22□□□□□ -0.93
HSPG2-212ENST00000493940 IL4P05112 153 aa9.22□□□□□ -0.93
HSPG2-212ENST00000493940 SLC25A4P12235 298 aa9.22□□□□□ -0.93
HSPG2-212ENST00000493940 ANXA3P12429 323 aa9.22□□□□□ -0.93
HSPG2-212ENST00000493940 BMI1P35226 326 aa9.22□□□□□ -0.93
HSPG2-212ENST00000493940 AP3S2P59780 193 aa9.22□□□□□ -0.93
HSPG2-212ENST00000493940 GGNBP1Q5YKI7 109 aa9.22□□□□□ -0.93
HSPG2-212ENST00000493940 STXBP6Q8NFX7 210 aa9.22□□□□□ -0.93
HSPG2-212ENST00000493940 OR51G1Q8NGK1 321 aa9.22□□□□□ -0.93
HSPG2-212ENST00000493940 Q8WTZ3 238 aa9.22□□□□□ -0.93
HSPG2-212ENST00000493940 METTL26Q96S19 204 aa9.22□□□□□ -0.93
HSPG2-212ENST00000493940 SLC25A21Q9BQT8 299 aaPredicted RBP9.22□□□□□ -0.93
HSPG2-212ENST00000493940 FRAS1Q86XX4 4008 aa9.21□□□□□ -0.93
HSPG2-212ENST00000493940 TRAV2A0A0B4J234 112 aa9.21□□□□□ -0.94
HSPG2-212ENST00000493940 C9orf170A2RU37 121 aa9.21□□□□□ -0.94
HSPG2-212ENST00000493940 PLA2G10O15496 165 aa9.21□□□□□ -0.94
HSPG2-212ENST00000493940 BUB3O43684 328 aa9.21□□□□□ -0.94
HSPG2-212ENST00000493940 NDUFB6O95139 128 aa9.21□□□□□ -0.94
HSPG2-212ENST00000493940 TOMM40O96008 361 aa9.21□□□□□ -0.94
HSPG2-212ENST00000493940 ZNF688P0C7X2 276 aa9.21□□□□□ -0.94
HSPG2-212ENST00000493940 DEFB1P60022 68 aa9.21□□□□□ -0.94
HSPG2-212ENST00000493940 PAFAH1B2P68402 229 aa9.21□□□□□ -0.94
HSPG2-212ENST00000493940 SPANXN2Q5MJ10 180 aa9.21□□□□□ -0.94
HSPG2-212ENST00000493940 TMEM182Q6ZP80 229 aaPredicted RBP9.21□□□□□ -0.94
HSPG2-212ENST00000493940 CENPSQ8N2Z9 138 aa9.21□□□□□ -0.94
HSPG2-212ENST00000493940 DUXBA0A1W2PPF3 345 aa9.2□□□□□ -0.94
HSPG2-212ENST00000493940 IFNA4P05014 189 aa9.2□□□□□ -0.94
HSPG2-212ENST00000493940 HNRNPCP07910 306 aaKnown RBP eCLIP9.2□□□□□ -0.94
HSPG2-212ENST00000493940 RD3LP0DJH9 198 aa9.2□□□□□ -0.94
HSPG2-212ENST00000493940 SLC25A6P12236 298 aa9.2□□□□□ -0.94
HSPG2-212ENST00000493940 ANXA7P20073 488 aaKnown RBP9.2□□□□□ -0.94
HSPG2-212ENST00000493940 SRPXP78539 464 aa9.2□□□□□ -0.94
HSPG2-212ENST00000493940 PMS2P11Q13670 270 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms