RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 ACY3Q96HD9 319 aa9.62□□□□□ -0.87
SNX17-208ENST00000493711 MFFQ9GZY8 342 aa9.62□□□□□ -0.87
SNX17-208ENST00000493711 IGHV3-21A0A0B4J1V1 117 aa9.61□□□□□ -0.87
SNX17-208ENST00000493711 SMCO3A2RU48 225 aa9.61□□□□□ -0.87
SNX17-208ENST00000493711 SMLR1H3BR10 107 aa9.61□□□□□ -0.87
SNX17-208ENST00000493711 ARPC5O15511 151 aa9.61□□□□□ -0.87
SNX17-208ENST00000493711 GGCTO75223 188 aaKnown RBP9.61□□□□□ -0.87
SNX17-208ENST00000493711 MPDU1O75352 247 aa9.61□□□□□ -0.87
SNX17-208ENST00000493711 IFNA5P01569 189 aa9.61□□□□□ -0.87
SNX17-208ENST00000493711 IGHV3-11P01762 117 aa9.61□□□□□ -0.87
SNX17-208ENST00000493711 CLEC3BP05452 202 aa9.61□□□□□ -0.87
SNX17-208ENST00000493711 C4BPBP20851 252 aa9.61□□□□□ -0.87
SNX17-208ENST00000493711 ZP3P21754 424 aa9.61□□□□□ -0.87
SNX17-208ENST00000493711 ARL3P36405 182 aa9.61□□□□□ -0.87
SNX17-208ENST00000493711 KRTAP10-3P60369 221 aa9.61□□□□□ -0.87
SNX17-208ENST00000493711 NHLH2Q02577 135 aa9.61□□□□□ -0.87
SNX17-208ENST00000493711 RELQ04864 619 aaPredicted RBP9.61□□□□□ -0.87
SNX17-208ENST00000493711 VWC2Q2TAL6 325 aa9.61□□□□□ -0.87
SNX17-208ENST00000493711 CLEC19AQ6UXS0 136 aa9.61□□□□□ -0.87
SNX17-208ENST00000493711 C11orf44Q8N8P7 122 aa9.61□□□□□ -0.87
SNX17-208ENST00000493711 UBAC2Q8NBM4 344 aa9.61□□□□□ -0.87
SNX17-208ENST00000493711 OR4F17Q8NGA8 305 aa9.61□□□□□ -0.87
SNX17-208ENST00000493711 NPIPB3Q92617 1050 aa9.61□□□□□ -0.87
SNX17-208ENST00000493711 DPF1Q92782 380 aa9.61□□□□□ -0.87
SNX17-208ENST00000493711 CCDC140Q96MF4 163 aa9.61□□□□□ -0.87
SNX17-208ENST00000493711 OR4F4Q96R69 305 aa9.61□□□□□ -0.87
SNX17-208ENST00000493711 ATP5SQ99766 215 aa9.61□□□□□ -0.87
SNX17-208ENST00000493711 GNB4Q9HAV0 340 aa9.61□□□□□ -0.87
SNX17-208ENST00000493711 TGOLN2O43493 480 aa9.6□□□□□ -0.87
SNX17-208ENST00000493711 CFDP00746 253 aaPredicted RBP9.6□□□□□ -0.87
SNX17-208ENST00000493711 OR10J1P30954 320 aa9.6□□□□□ -0.87
SNX17-208ENST00000493711 GPR183P32249 361 aa9.6□□□□□ -0.87
SNX17-208ENST00000493711 MYCNOSP40205 109 aa9.6□□□□□ -0.87
SNX17-208ENST00000493711 YPEL3P61236 119 aaPredicted RBP9.6□□□□□ -0.87
SNX17-208ENST00000493711 SELENOTP62341 195 aa9.6□□□□□ -0.87
SNX17-208ENST00000493711 ARL16Q0P5N6 197 aa9.6□□□□□ -0.87
SNX17-208ENST00000493711 ZNF266Q14584 549 aa9.6□□□□□ -0.87
SNX17-208ENST00000493711 MLANAQ16655 118 aa9.6□□□□□ -0.87
SNX17-208ENST00000493711 TEPPQ6URK8 271 aa9.6□□□□□ -0.87
SNX17-208ENST00000493711 C8orf86Q6ZUL3 223 aa9.6□□□□□ -0.87
SNX17-208ENST00000493711 HAPLN4Q86UW8 402 aa9.6□□□□□ -0.87
SNX17-208ENST00000493711 THAP8Q8NA92 274 aa9.6□□□□□ -0.87
SNX17-208ENST00000493711 OR1N2Q8NGR9 330 aa9.6□□□□□ -0.87
SNX17-208ENST00000493711 PPP1R14BQ96C90 147 aa9.6□□□□□ -0.87
SNX17-208ENST00000493711 TRGV9Q99603 122 aa9.6□□□□□ -0.87
SNX17-208ENST00000493711 PARD6GQ9BYG4 376 aaPredicted RBP9.6□□□□□ -0.87
SNX17-208ENST00000493711 BORCS7-ASMTA0A0B4J1R7 106 aa9.59□□□□□ -0.87
SNX17-208ENST00000493711 ANKRD34BA5PLL1 514 aa9.59□□□□□ -0.87
SNX17-208ENST00000493711 RNF222A6NCQ9 220 aa9.59□□□□□ -0.87
SNX17-208ENST00000493711 OR2T8A6NH00 312 aa9.59□□□□□ -0.87
SNX17-208ENST00000493711 ZFP92A6NM28 416 aa9.59□□□□□ -0.87
SNX17-208ENST00000493711 LINC01619G3V211 115 aa9.59□□□□□ -0.87
SNX17-208ENST00000493711 M0QZ24 198 aa9.59□□□□□ -0.87
SNX17-208ENST00000493711 CTSGP08311 255 aa9.59□□□□□ -0.87
SNX17-208ENST00000493711 DEFA5Q01523 94 aa9.59□□□□□ -0.87
SNX17-208ENST00000493711 ZNF616Q08AN1 781 aa9.59□□□□□ -0.87
SNX17-208ENST00000493711 FAM106AQ4KMX7 169 aa9.59□□□□□ -0.87
SNX17-208ENST00000493711 KCNRGQ8N5I3 272 aa9.59□□□□□ -0.87
SNX17-208ENST00000493711 OR11H4Q8NGC9 324 aa9.59□□□□□ -0.87
SNX17-208ENST00000493711 OR5B12Q96R08 314 aa9.59□□□□□ -0.87
SNX17-208ENST00000493711 KCNIP2Q9NS61 270 aa9.59□□□□□ -0.87
SNX17-208ENST00000493711 WDR83OSQ9Y284 106 aa9.59□□□□□ -0.87
SNX17-208ENST00000493711 S4R3C0 116 aa9.59□□□□□ -0.87
SNX17-208ENST00000493711 ELOA3CA0A087WX78 387 aaPredicted RBP9.58□□□□□ -0.88
SNX17-208ENST00000493711 A0A1W2PRX2 142 aa9.58□□□□□ -0.88
SNX17-208ENST00000493711 ADARB2-AS1A8MUL3 147 aa9.58□□□□□ -0.88
SNX17-208ENST00000493711 F8W735 103 aaPredicted RBP9.58□□□□□ -0.88
SNX17-208ENST00000493711 CCL24O00175 119 aa9.58□□□□□ -0.88
SNX17-208ENST00000493711 IGHV3-48P01763 117 aa9.58□□□□□ -0.88
SNX17-208ENST00000493711 IGHV3-23P01764 117 aa9.58□□□□□ -0.88
SNX17-208ENST00000493711 IGLC1P0CG04 106 aa9.58□□□□□ -0.88
SNX17-208ENST00000493711 EIF5AP63241 154 aaKnown RBP9.58□□□□□ -0.88
SNX17-208ENST00000493711 CLINT1Q14677 625 aa9.58□□□□□ -0.88
SNX17-208ENST00000493711 RPEL1Q2QD12 228 aa9.58□□□□□ -0.88
SNX17-208ENST00000493711 NSUN5P1Q3KNT7 163 aa9.58□□□□□ -0.88
SNX17-208ENST00000493711 ZNF600Q6ZNG1 722 aa9.58□□□□□ -0.88
SNX17-208ENST00000493711 GPHB5Q86YW7 130 aa9.58□□□□□ -0.88
SNX17-208ENST00000493711 SCGB1C1Q8TD33 95 aa9.58□□□□□ -0.88
SNX17-208ENST00000493711 Q8WTZ3 238 aa9.58□□□□□ -0.88
SNX17-208ENST00000493711 FBXL17Q9UF56 701 aa9.58□□□□□ -0.88
SNX17-208ENST00000493711 LSM4Q9Y4Z0 139 aaKnown RBP9.58□□□□□ -0.88
SNX17-208ENST00000493711 KANTRA0A1W2PQU2 76 aa9.57□□□□□ -0.88
SNX17-208ENST00000493711 C17orf112F2Z3M2 114 aa9.57□□□□□ -0.88
SNX17-208ENST00000493711 BMPR1BO00238 502 aa9.57□□□□□ -0.88
SNX17-208ENST00000493711 NDUFA4O00483 81 aa9.57□□□□□ -0.88
SNX17-208ENST00000493711 PLXNB1O43157 2135 aa9.57□□□□□ -0.88
SNX17-208ENST00000493711 JTBO76095 146 aa9.57□□□□□ -0.88
SNX17-208ENST00000493711 IGKV1-17P01599 117 aa9.57□□□□□ -0.88
SNX17-208ENST00000493711 RD3LP0DJH9 198 aa9.57□□□□□ -0.88
SNX17-208ENST00000493711 S100A7P31151 101 aa9.57□□□□□ -0.88
SNX17-208ENST00000493711 EIF2B2P49770 351 aaKnown RBP9.57□□□□□ -0.88
SNX17-208ENST00000493711 FHL3Q13643 280 aa9.57□□□□□ -0.88
SNX17-208ENST00000493711 BTNL8Q6UX41 500 aa9.57□□□□□ -0.88
SNX17-208ENST00000493711 S100A7AQ86SG5 101 aa9.57□□□□□ -0.88
SNX17-208ENST00000493711 ZNF709Q8N972 641 aa9.57□□□□□ -0.88
SNX17-208ENST00000493711 OR11H1Q8NG94 326 aa9.57□□□□□ -0.88
SNX17-208ENST00000493711 ARPC5LQ9BPX5 153 aa9.57□□□□□ -0.88
SNX17-208ENST00000493711 MRPL36Q9P0J6 103 aaKnown RBP9.57□□□□□ -0.88
SNX17-208ENST00000493711 IGHV4OR15-8A0A075B7B6 117 aa9.56□□□□□ -0.88
SNX17-208ENST00000493711 A0A087WW49 117 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms