RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 RPL11P62913 178 aaKnown RBP13.3□□□□□ -0.28
PTPRU-207ENST00000492954 TNFRSF9Q07011 255 aa13.3□□□□□ -0.28
PTPRU-207ENST00000492954 SMCO1Q147U7 214 aa13.3□□□□□ -0.28
PTPRU-207ENST00000492954 TMED4Q7Z7H5 227 aa13.3□□□□□ -0.28
PTPRU-207ENST00000492954 LGI3Q8N145 548 aa13.3□□□□□ -0.28
PTPRU-207ENST00000492954 STPG3Q8N7X2 389 aa13.3□□□□□ -0.28
PTPRU-207ENST00000492954 METTL26Q96S19 204 aa13.3□□□□□ -0.28
PTPRU-207ENST00000492954 MS4A6AQ9H2W1 248 aa13.3□□□□□ -0.28
PTPRU-207ENST00000492954 TMEM231Q9H6L2 316 aa13.3□□□□□ -0.28
PTPRU-207ENST00000492954 SHPKQ9UHJ6 478 aa13.3□□□□□ -0.28
PTPRU-207ENST00000492954 DNASE2O00115 360 aaPredicted RBP13.29□□□□□ -0.28
PTPRU-207ENST00000492954 SLC25A4P12235 298 aa13.29□□□□□ -0.28
PTPRU-207ENST00000492954 CRYBB3P26998 211 aa13.29□□□□□ -0.28
PTPRU-207ENST00000492954 OR10J1P30954 320 aa13.29□□□□□ -0.28
PTPRU-207ENST00000492954 SRPXP78539 464 aa13.29□□□□□ -0.28
PTPRU-207ENST00000492954 CCDC190Q86UF4 302 aa13.29□□□□□ -0.28
PTPRU-207ENST00000492954 OR1S2Q8NGQ3 325 aa13.29□□□□□ -0.28
PTPRU-207ENST00000492954 RNF183Q96D59 192 aa13.29□□□□□ -0.28
PTPRU-207ENST00000492954 RBKSQ9H477 322 aa13.29□□□□□ -0.28
PTPRU-207ENST00000492954 HSPB7Q9UBY9 170 aa13.29□□□□□ -0.28
PTPRU-207ENST00000492954 CACFD1Q9UGQ2 172 aa13.29□□□□□ -0.28
PTPRU-207ENST00000492954 A0A0J9YWU9 116 aa13.28□□□□□ -0.28
PTPRU-207ENST00000492954 A0A1W2PS18 150 aa13.28□□□□□ -0.28
PTPRU-207ENST00000492954 IFNA10P01566 189 aa13.28□□□□□ -0.28
PTPRU-207ENST00000492954 FAM24BQ8N5W8 94 aa13.28□□□□□ -0.28
PTPRU-207ENST00000492954 DTD1Q8TEA8 209 aa13.28□□□□□ -0.28
PTPRU-207ENST00000492954 RABAC1Q9UI14 185 aa13.28□□□□□ -0.28
PTPRU-207ENST00000492954 P2RY1P47900 373 aa13.27□□□□□ -0.29
PTPRU-207ENST00000492954 DEFB131AP59861 70 aa13.27□□□□□ -0.29
PTPRU-207ENST00000492954 EWSR1Q01844 656 aaKnown RBP eCLIP13.27□□□□□ -0.29
PTPRU-207ENST00000492954 RBMS2Q15434 407 aaKnown RBP13.27□□□□□ -0.29
PTPRU-207ENST00000492954 TMEM128Q5BJH2 165 aa13.27□□□□□ -0.29
PTPRU-207ENST00000492954 LYG2Q86SG7 212 aa13.27□□□□□ -0.29
PTPRU-207ENST00000492954 NOXA1Q86UR1 476 aa13.27□□□□□ -0.29
PTPRU-207ENST00000492954 NPIPB3Q92617 1050 aa13.27□□□□□ -0.29
PTPRU-207ENST00000492954 ACY3Q96HD9 319 aa13.27□□□□□ -0.29
PTPRU-207ENST00000492954 CSTL1Q9H114 145 aa13.27□□□□□ -0.29
PTPRU-207ENST00000492954 TRAV2A0A0B4J234 112 aa13.26□□□□□ -0.29
PTPRU-207ENST00000492954 YPEL3P61236 119 aaPredicted RBP13.26□□□□□ -0.29
PTPRU-207ENST00000492954 LEMD1Q68G75 181 aa13.26□□□□□ -0.29
PTPRU-207ENST00000492954 ETFRF1Q6IPR1 90 aa13.26□□□□□ -0.29
PTPRU-207ENST00000492954 STXBP6Q8NFX7 210 aa13.26□□□□□ -0.29
PTPRU-207ENST00000492954 OR1S1Q8NH92 325 aa13.26□□□□□ -0.29
PTPRU-207ENST00000492954 Q8WTZ3 238 aa13.26□□□□□ -0.29
PTPRU-207ENST00000492954 NARS2Q96I59 477 aaKnown RBP13.26□□□□□ -0.29
PTPRU-207ENST00000492954 U3KQ87 197 aa13.26□□□□□ -0.29
PTPRU-207ENST00000492954 MPTX1A8MV57 137 aa13.25□□□□□ -0.29
PTPRU-207ENST00000492954 ZNF701M0R085 212 aaPredicted RBP13.25□□□□□ -0.29
PTPRU-207ENST00000492954 VAMP1P23763 118 aa13.25□□□□□ -0.29
PTPRU-207ENST00000492954 SLC25A21Q9BQT8 299 aaPredicted RBP13.25□□□□□ -0.29
PTPRU-207ENST00000492954 U3KQE9 123 aa13.25□□□□□ -0.29
PTPRU-207ENST00000492954 DNAH1Q9P2D7 4330 aa13.25□□□□□ -0.29
PTPRU-207ENST00000492954 DUXBA0A1W2PPF3 345 aa13.24□□□□□ -0.29
PTPRU-207ENST00000492954 JTBO76095 146 aa13.24□□□□□ -0.29
PTPRU-207ENST00000492954 PMS2P11Q13670 270 aa13.24□□□□□ -0.29
PTPRU-207ENST00000492954 USF2Q15853 346 aaPredicted RBP13.24□□□□□ -0.29
PTPRU-207ENST00000492954 SPANXN2Q5MJ10 180 aa13.24□□□□□ -0.29
PTPRU-207ENST00000492954 DEDD2Q8WXF8 326 aa13.24□□□□□ -0.29
PTPRU-207ENST00000492954 SRRQ9GZT4 340 aa13.24□□□□□ -0.29
PTPRU-207ENST00000492954 PIGBOS1A0A0B4J2F0 54 aa13.23□□□□□ -0.29
PTPRU-207ENST00000492954 K7EQG2 157 aa13.23□□□□□ -0.29
PTPRU-207ENST00000492954 PITX3O75364 302 aa13.23□□□□□ -0.29
PTPRU-207ENST00000492954 IFNA4P05014 189 aa13.23□□□□□ -0.29
PTPRU-207ENST00000492954 IL4P05112 153 aa13.23□□□□□ -0.29
PTPRU-207ENST00000492954 HNRNPCP07910 306 aaKnown RBP eCLIP13.23□□□□□ -0.29
PTPRU-207ENST00000492954 PPP1R1AQ13522 171 aa13.23□□□□□ -0.29
PTPRU-207ENST00000492954 LRTM2Q8N967 370 aa13.23□□□□□ -0.29
PTPRU-207ENST00000492954 GLMPQ8WWB7 406 aa13.23□□□□□ -0.29
PTPRU-207ENST00000492954 GRAMD2BQ96HH9 432 aa13.23□□□□□ -0.29
PTPRU-207ENST00000492954 CXorf65A6NEN9 183 aa13.22□□□□□ -0.29
PTPRU-207ENST00000492954 SFT2D2O95562 160 aa13.22□□□□□ -0.29
PTPRU-207ENST00000492954 TOMM40O96008 361 aa13.22□□□□□ -0.29
PTPRU-207ENST00000492954 RD3LP0DJH9 198 aa13.22□□□□□ -0.29
PTPRU-207ENST00000492954 IAPPP10997 89 aa13.22□□□□□ -0.29
PTPRU-207ENST00000492954 C16orf54Q6UWD8 224 aa13.22□□□□□ -0.29
PTPRU-207ENST00000492954 CA1P00915 261 aaPredicted RBP13.21□□□□□ -0.29
PTPRU-207ENST00000492954 ZNF688P0C7X2 276 aa13.21□□□□□ -0.29
PTPRU-207ENST00000492954 BAK1Q16611 211 aa13.21□□□□□ -0.29
PTPRU-207ENST00000492954 STHQ8IWL8 128 aa13.21□□□□□ -0.29
PTPRU-207ENST00000492954 CENPSQ8N2Z9 138 aa13.21□□□□□ -0.29
PTPRU-207ENST00000492954 DCANP1Q8TF63 244 aa13.21□□□□□ -0.29
PTPRU-207ENST00000492954 GATAD1Q8WUU5 269 aa13.21□□□□□ -0.29
PTPRU-207ENST00000492954 PLECQ15149 4684 aaKnown RBP13.21□□□□□ -0.3
PTPRU-207ENST00000492954 PSG1P11464 419 aa13.2□□□□□ -0.3
PTPRU-207ENST00000492954 SLC25A6P12236 298 aa13.2□□□□□ -0.3
PTPRU-207ENST00000492954 EIF2B2P49770 351 aaKnown RBP13.2□□□□□ -0.3
PTPRU-207ENST00000492954 GAMTQ14353 236 aa13.2□□□□□ -0.3
PTPRU-207ENST00000492954 OR51G1Q8NGK1 321 aa13.2□□□□□ -0.3
PTPRU-207ENST00000492954 RARRES2Q99969 163 aa13.2□□□□□ -0.3
PTPRU-207ENST00000492954 TMED3Q9Y3Q3 217 aa13.2□□□□□ -0.3
PTPRU-207ENST00000492954 HELTA6NFD8 242 aa13.19□□□□□ -0.3
PTPRU-207ENST00000492954 KNCNA6PVL3 124 aa13.19□□□□□ -0.3
PTPRU-207ENST00000492954 HOXB5P09067 269 aa13.19□□□□□ -0.3
PTPRU-207ENST00000492954 GPX4P36969 197 aaPredicted RBP13.19□□□□□ -0.3
PTPRU-207ENST00000492954 INPP1P49441 399 aa13.19□□□□□ -0.3
PTPRU-207ENST00000492954 ATP5IP56385 69 aaPredicted RBP13.19□□□□□ -0.3
PTPRU-207ENST00000492954 DHRS2Q13268 280 aa13.19□□□□□ -0.3
PTPRU-207ENST00000492954 TRIQKQ629K1 86 aa13.19□□□□□ -0.3
PTPRU-207ENST00000492954 OR11H2Q8NH07 326 aa13.19□□□□□ -0.3
PTPRU-207ENST00000492954 SLC35E1Q96K37 410 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 1027.8 ms