RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 PRRG2O14669 202 aa12.97□□□□□ -0.33
SEMA4D-220ENST00000492386 REG1AP05451 166 aa12.97□□□□□ -0.33
SEMA4D-220ENST00000492386 SRIP30626 198 aa12.97□□□□□ -0.33
SEMA4D-220ENST00000492386 RUSC1-AS1Q66K80 236 aa12.97□□□□□ -0.33
SEMA4D-220ENST00000492386 FAM231DQ6ZW35 169 aa12.97□□□□□ -0.33
SEMA4D-220ENST00000492386 Q8N976 141 aa12.97□□□□□ -0.33
SEMA4D-220ENST00000492386 KCNS1Q96KK3 526 aa12.97□□□□□ -0.33
SEMA4D-220ENST00000492386 ATG101Q9BSB4 218 aa12.97□□□□□ -0.33
SEMA4D-220ENST00000492386 SSBP3Q9BWW4 388 aaPredicted RBP12.97□□□□□ -0.33
SEMA4D-220ENST00000492386 JKAMPQ9P055 326 aa12.97□□□□□ -0.33
SEMA4D-220ENST00000492386 TRAV34A0A0B4J273 112 aa12.96□□□□□ -0.33
SEMA4D-220ENST00000492386 A0A1W2PS18 150 aa12.96□□□□□ -0.33
SEMA4D-220ENST00000492386 MYCNOSP40205 109 aa12.96□□□□□ -0.33
SEMA4D-220ENST00000492386 VMA21Q3ZAQ7 101 aa12.96□□□□□ -0.33
SEMA4D-220ENST00000492386 TMEM155Q4W5P6 130 aa12.96□□□□□ -0.33
SEMA4D-220ENST00000492386 NEU1Q99519 415 aa12.96□□□□□ -0.33
SEMA4D-220ENST00000492386 FAM103A1Q9BTL3 118 aaKnown RBP12.96□□□□□ -0.33
SEMA4D-220ENST00000492386 TBL2Q9Y4P3 447 aaKnown RBP12.96□□□□□ -0.33
SEMA4D-220ENST00000492386 C22orf46C9J442 243 aa12.96□□□□□ -0.33
SEMA4D-220ENST00000492386 LINC00305Q7Z4B0 112 aa12.96□□□□□ -0.33
SEMA4D-220ENST00000492386 C11orf42Q8N5U0 333 aa12.96□□□□□ -0.33
SEMA4D-220ENST00000492386 PKDREJQ9NTG1 2253 aa12.96□□□□□ -0.34
SEMA4D-220ENST00000492386 IGLC7A0M8Q6 106 aa12.95□□□□□ -0.34
SEMA4D-220ENST00000492386 TCAPO15273 167 aa12.95□□□□□ -0.34
SEMA4D-220ENST00000492386 ZNF253O75346 499 aa12.95□□□□□ -0.34
SEMA4D-220ENST00000492386 PLAUP00749 431 aa12.95□□□□□ -0.34
SEMA4D-220ENST00000492386 CRYGCP07315 174 aa12.95□□□□□ -0.34
SEMA4D-220ENST00000492386 TMEM183BQ1AE95 376 aa12.95□□□□□ -0.34
SEMA4D-220ENST00000492386 ASCL5Q7RTU5 278 aa12.95□□□□□ -0.34
SEMA4D-220ENST00000492386 WIPF2Q8TF74 440 aaPredicted RBP12.95□□□□□ -0.34
SEMA4D-220ENST00000492386 RNASE6Q93091 150 aaKnown RBP12.95□□□□□ -0.34
SEMA4D-220ENST00000492386 MIEN1Q9BRT3 115 aa12.95□□□□□ -0.34
SEMA4D-220ENST00000492386 NRN1Q9NPD7 142 aa12.95□□□□□ -0.34
SEMA4D-220ENST00000492386 PAM16Q9Y3D7 125 aa12.95□□□□□ -0.34
SEMA4D-220ENST00000492386 PCNX1Q96RV3 2341 aa12.95□□□□□ -0.34
SEMA4D-220ENST00000492386 APCSP02743 223 aa12.95□□□□□ -0.34
SEMA4D-220ENST00000492386 IGHV1-8P0DP01 117 aa12.95□□□□□ -0.34
SEMA4D-220ENST00000492386 MC5RP33032 325 aa12.95□□□□□ -0.34
SEMA4D-220ENST00000492386 MFAP2P55001 183 aa12.95□□□□□ -0.34
SEMA4D-220ENST00000492386 SLAQ13239 276 aa12.95□□□□□ -0.34
SEMA4D-220ENST00000492386 PVRIGQ6DKI7 326 aa12.95□□□□□ -0.34
SEMA4D-220ENST00000492386 ZNF705AQ6ZN79 300 aaPredicted RBP12.95□□□□□ -0.34
SEMA4D-220ENST00000492386 VAMP8Q9BV40 100 aa12.95□□□□□ -0.34
SEMA4D-220ENST00000492386 C7orf69Q9H7B7 122 aa12.95□□□□□ -0.34
SEMA4D-220ENST00000492386 ZNF586Q9NXT0 402 aa12.95□□□□□ -0.34
SEMA4D-220ENST00000492386 KAAG1Q9UBP8 84 aa12.95□□□□□ -0.34
SEMA4D-220ENST00000492386 SSUH2Q9Y2M2 353 aa12.95□□□□□ -0.34
SEMA4D-220ENST00000492386 AMTP48728 403 aa12.94□□□□□ -0.34
SEMA4D-220ENST00000492386 KRTDAPP60985 99 aa12.94□□□□□ -0.34
SEMA4D-220ENST00000492386 GNG5P63218 68 aa12.94□□□□□ -0.34
SEMA4D-220ENST00000492386 NUDT10Q8NFP7 164 aa12.94□□□□□ -0.34
SEMA4D-220ENST00000492386 NUDT11Q96G61 164 aa12.94□□□□□ -0.34
SEMA4D-220ENST00000492386 SH3BGRL2Q9UJC5 107 aa12.94□□□□□ -0.34
SEMA4D-220ENST00000492386 IGHV3-72A0A0B4J1Y9 119 aa12.94□□□□□ -0.34
SEMA4D-220ENST00000492386 MOSP00540 346 aa12.94□□□□□ -0.34
SEMA4D-220ENST00000492386 LGALS7P47929 136 aa12.94□□□□□ -0.34
SEMA4D-220ENST00000492386 TBR1Q16650 682 aa12.94□□□□□ -0.34
SEMA4D-220ENST00000492386 RASL11AQ6T310 242 aa12.94□□□□□ -0.34
SEMA4D-220ENST00000492386 ZNF841Q6ZN19 808 aa12.94□□□□□ -0.34
SEMA4D-220ENST00000492386 GRAMD2BQ96HH9 432 aa12.94□□□□□ -0.34
SEMA4D-220ENST00000492386 ZNF331Q9NQX6 463 aaPredicted RBP12.94□□□□□ -0.34
SEMA4D-220ENST00000492386 TNFRSF19Q9NS68 423 aa12.94□□□□□ -0.34
SEMA4D-220ENST00000492386 PMCHP20382 165 aa12.93□□□□□ -0.34
SEMA4D-220ENST00000492386 GDF5OSQ5U4N7 250 aa12.93□□□□□ -0.34
SEMA4D-220ENST00000492386 HCP5Q6MZN7 132 aa12.93□□□□□ -0.34
SEMA4D-220ENST00000492386 ENSAO43768 121 aaKnown RBP12.93□□□□□ -0.34
SEMA4D-220ENST00000492386 ZNF324O75467 553 aaPredicted RBP12.93□□□□□ -0.34
SEMA4D-220ENST00000492386 ORM2P19652 201 aa12.93□□□□□ -0.34
SEMA4D-220ENST00000492386 NUP35Q8NFH5 326 aa12.93□□□□□ -0.34
SEMA4D-220ENST00000492386 ABHD17AQ96GS6 310 aa12.93□□□□□ -0.34
SEMA4D-220ENST00000492386 TMEM133Q9H2Q1 129 aa12.93□□□□□ -0.34
SEMA4D-220ENST00000492386 SHISA9B4DS77 424 aa12.92□□□□□ -0.34
SEMA4D-220ENST00000492386 DIRC3C9JPN6 131 aa12.92□□□□□ -0.34
SEMA4D-220ENST00000492386 ETFRF1Q6IPR1 90 aa12.92□□□□□ -0.34
SEMA4D-220ENST00000492386 C19orf35Q6ZS72 473 aa12.92□□□□□ -0.34
SEMA4D-220ENST00000492386 MRPL52Q86TS9 123 aaKnown RBP12.92□□□□□ -0.34
SEMA4D-220ENST00000492386 NIT1Q86X76 327 aa12.92□□□□□ -0.34
SEMA4D-220ENST00000492386 TEX45Q8NA69 505 aa12.92□□□□□ -0.34
SEMA4D-220ENST00000492386 OR1B1Q8NGR6 318 aa12.92□□□□□ -0.34
SEMA4D-220ENST00000492386 PERPQ96FX8 193 aa12.92□□□□□ -0.34
SEMA4D-220ENST00000492386 EPDR1Q9UM22 224 aa12.92□□□□□ -0.34
SEMA4D-220ENST00000492386 ATMQ13315 3056 aa12.92□□□□□ -0.34
SEMA4D-220ENST00000492386 E7EQL1 145 aa12.92□□□□□ -0.34
SEMA4D-220ENST00000492386 KALRNO60229 2985 aa12.92□□□□□ -0.34
SEMA4D-220ENST00000492386 LHFPL4Q7Z7J7 247 aa12.92□□□□□ -0.34
SEMA4D-220ENST00000492386 Q8NA96 180 aa12.92□□□□□ -0.34
SEMA4D-220ENST00000492386 STXBP6Q8NFX7 210 aa12.92□□□□□ -0.34
SEMA4D-220ENST00000492386 C18orf32Q8TCD1 76 aa12.92□□□□□ -0.34
SEMA4D-220ENST00000492386 TSKUQ8WUA8 353 aa12.92□□□□□ -0.34
SEMA4D-220ENST00000492386 TMEM68Q96MH6 324 aa12.92□□□□□ -0.34
SEMA4D-220ENST00000492386 TRGV9Q99603 122 aa12.92□□□□□ -0.34
SEMA4D-220ENST00000492386 CRYGBP07316 175 aa12.91□□□□□ -0.34
SEMA4D-220ENST00000492386 CNTFRP26992 372 aa12.91□□□□□ -0.34
SEMA4D-220ENST00000492386 PRR27Q6MZM9 219 aa12.91□□□□□ -0.34
SEMA4D-220ENST00000492386 SSX8Q7RTT4 187 aa12.91□□□□□ -0.34
SEMA4D-220ENST00000492386 SPACA3Q8IXA5 215 aa12.91□□□□□ -0.34
SEMA4D-220ENST00000492386 BLNKQ8WV28 456 aa12.91□□□□□ -0.34
SEMA4D-220ENST00000492386 DYNLRB1Q9NP97 96 aa12.91□□□□□ -0.34
SEMA4D-220ENST00000492386 KLF12Q9Y4X4 402 aa12.91□□□□□ -0.34
SEMA4D-220ENST00000492386 VSTM5A8MXK1 200 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms