RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 KIR2DL5BA0A0G2JPC4 375 aa12.96□□□□□ -0.33
SEC13-218ENST00000490283 OR10J1P30954 320 aa12.96□□□□□ -0.33
SEC13-218ENST00000490283 TIGITQ495A1 244 aa12.96□□□□□ -0.33
SEC13-218ENST00000490283 Q6ZWC4 215 aa12.96□□□□□ -0.33
SEC13-218ENST00000490283 KIR2DL5AQ8N109 375 aa12.96□□□□□ -0.33
SEC13-218ENST00000490283 KIR2DL5BQ8NHK3 375 aa12.96□□□□□ -0.33
SEC13-218ENST00000490283 Q8WTZ3 238 aa12.96□□□□□ -0.33
SEC13-218ENST00000490283 MRPL36Q9P0J6 103 aaKnown RBP12.96□□□□□ -0.33
SEC13-218ENST00000490283 NBEAL2Q6ZNJ1 2754 aa12.95□□□□□ -0.34
SEC13-218ENST00000490283 DFFBO76075 338 aa12.95□□□□□ -0.34
SEC13-218ENST00000490283 RPL35AP18077 110 aaKnown RBP12.95□□□□□ -0.34
SEC13-218ENST00000490283 EIF2B2P49770 351 aaKnown RBP12.95□□□□□ -0.34
SEC13-218ENST00000490283 ATP5IP56385 69 aaPredicted RBP12.95□□□□□ -0.34
SEC13-218ENST00000490283 RBMS2Q15434 407 aaKnown RBP12.95□□□□□ -0.34
SEC13-218ENST00000490283 FAM90A2PQ658T7 463 aa12.95□□□□□ -0.34
SEC13-218ENST00000490283 PRSS54Q6PEW0 395 aa12.95□□□□□ -0.34
SEC13-218ENST00000490283 WFDC3Q8IUB2 231 aa12.95□□□□□ -0.34
SEC13-218ENST00000490283 CENPSQ8N2Z9 138 aa12.95□□□□□ -0.34
SEC13-218ENST00000490283 OVOL2Q9BRP0 275 aa12.95□□□□□ -0.34
SEC13-218ENST00000490283 RBKSQ9H477 322 aa12.95□□□□□ -0.34
SEC13-218ENST00000490283 TP53TG1Q9Y2A0 90 aa12.95□□□□□ -0.34
SEC13-218ENST00000490283 TRAV2A0A0B4J234 112 aa12.94□□□□□ -0.34
SEC13-218ENST00000490283 IGKV1-17P01599 117 aa12.94□□□□□ -0.34
SEC13-218ENST00000490283 APOHP02749 345 aaPredicted RBP12.94□□□□□ -0.34
SEC13-218ENST00000490283 IFNA4P05014 189 aa12.94□□□□□ -0.34
SEC13-218ENST00000490283 IGLC1P0CG04 106 aa12.94□□□□□ -0.34
SEC13-218ENST00000490283 YPEL3P61236 119 aaPredicted RBP12.94□□□□□ -0.34
SEC13-218ENST00000490283 APRG1Q8IVJ8 170 aa12.94□□□□□ -0.34
SEC13-218ENST00000490283 ACY3Q96HD9 319 aa12.94□□□□□ -0.34
SEC13-218ENST00000490283 SRRQ9GZT4 340 aa12.94□□□□□ -0.34
SEC13-218ENST00000490283 MS4A6AQ9H2W1 248 aa12.94□□□□□ -0.34
SEC13-218ENST00000490283 RABAC1Q9UI14 185 aa12.94□□□□□ -0.34
SEC13-218ENST00000490283 KMT2CQ8NEZ4 4911 aaKnown RBP12.93□□□□□ -0.34
SEC13-218ENST00000490283 DNAH7Q8WXX0 4024 aa12.93□□□□□ -0.34
SEC13-218ENST00000490283 NAP1L6A6NFF2 107 aa12.93□□□□□ -0.34
SEC13-218ENST00000490283 SPRY2O43597 315 aa12.93□□□□□ -0.34
SEC13-218ENST00000490283 CRYBB3P26998 211 aa12.93□□□□□ -0.34
SEC13-218ENST00000490283 DEFB135Q30KP9 77 aa12.93□□□□□ -0.34
SEC13-218ENST00000490283 LRTM2Q8N967 370 aa12.93□□□□□ -0.34
SEC13-218ENST00000490283 NPIPB3Q92617 1050 aa12.93□□□□□ -0.34
SEC13-218ENST00000490283 MAP6D1Q9H9H5 199 aa12.93□□□□□ -0.34
SEC13-218ENST00000490283 TMED3Q9Y3Q3 217 aa12.93□□□□□ -0.34
SEC13-218ENST00000490283 CENPXA8MT69 81 aa12.92□□□□□ -0.34
SEC13-218ENST00000490283 MED6O75586 246 aa12.92□□□□□ -0.34
SEC13-218ENST00000490283 SFT2D2O95562 160 aa12.92□□□□□ -0.34
SEC13-218ENST00000490283 HNRNPCP07910 306 aaKnown RBP eCLIP12.92□□□□□ -0.34
SEC13-218ENST00000490283 SLC25A6P12236 298 aa12.92□□□□□ -0.34
SEC13-218ENST00000490283 P2RY1P47900 373 aa12.92□□□□□ -0.34
SEC13-218ENST00000490283 UBE2MP61081 183 aaKnown RBP12.92□□□□□ -0.34
SEC13-218ENST00000490283 RAB11AP62491 216 aa12.92□□□□□ -0.34
SEC13-218ENST00000490283 STXBP6Q8NFX7 210 aa12.92□□□□□ -0.34
SEC13-218ENST00000490283 TMEM170AQ8WVE7 144 aa12.92□□□□□ -0.34
SEC13-218ENST00000490283 SLC35E1Q96K37 410 aa12.92□□□□□ -0.34
SEC13-218ENST00000490283 HELTA6NFD8 242 aa12.91□□□□□ -0.34
SEC13-218ENST00000490283 FAM90A26D6RGX4 464 aa12.91□□□□□ -0.34
SEC13-218ENST00000490283 IL4P05112 153 aa12.91□□□□□ -0.34
SEC13-218ENST00000490283 RD3LP0DJH9 198 aa12.91□□□□□ -0.34
SEC13-218ENST00000490283 RPP30P78346 268 aaKnown RBP12.91□□□□□ -0.34
SEC13-218ENST00000490283 PPP1R1AQ13522 171 aa12.91□□□□□ -0.34
SEC13-218ENST00000490283 LILRB2Q8N423 598 aa12.91□□□□□ -0.34
SEC13-218ENST00000490283 NDUFA13Q9P0J0 144 aa12.91□□□□□ -0.34
SEC13-218ENST00000490283 PAIP2BQ9ULR5 123 aaKnown RBP12.91□□□□□ -0.34
SEC13-218ENST00000490283 MPTX1A8MV57 137 aa12.9□□□□□ -0.34
SEC13-218ENST00000490283 TOMM40O96008 361 aa12.9□□□□□ -0.34
SEC13-218ENST00000490283 FABP1P07148 127 aa12.9□□□□□ -0.34
SEC13-218ENST00000490283 DEFB131AP59861 70 aa12.9□□□□□ -0.34
SEC13-218ENST00000490283 RNF183Q96D59 192 aa12.9□□□□□ -0.34
SEC13-218ENST00000490283 CIB3Q96Q77 187 aaPredicted RBP12.9□□□□□ -0.34
SEC13-218ENST00000490283 CSTL1Q9H114 145 aa12.9□□□□□ -0.34
SEC13-218ENST00000490283 PFDN2Q9UHV9 154 aa12.9□□□□□ -0.34
SEC13-218ENST00000490283 ZFP92A6NM28 416 aa12.89□□□□□ -0.35
SEC13-218ENST00000490283 PITX3O75364 302 aa12.89□□□□□ -0.35
SEC13-218ENST00000490283 HOXB5P09067 269 aa12.89□□□□□ -0.35
SEC13-218ENST00000490283 IAPPP10997 89 aa12.89□□□□□ -0.35
SEC13-218ENST00000490283 GPX4P36969 197 aaPredicted RBP12.89□□□□□ -0.35
SEC13-218ENST00000490283 NUP62P37198 522 aaPredicted RBP12.89□□□□□ -0.35
SEC13-218ENST00000490283 AP2S1P53680 142 aaPredicted RBP12.89□□□□□ -0.35
SEC13-218ENST00000490283 ZNF124Q15973 351 aa12.89□□□□□ -0.35
SEC13-218ENST00000490283 TMEM217Q8N7C4 229 aa12.89□□□□□ -0.35
SEC13-218ENST00000490283 LINC00854A0A1B0GVQ3 168 aa12.88□□□□□ -0.35
SEC13-218ENST00000490283 NDUFB6O95139 128 aa12.88□□□□□ -0.35
SEC13-218ENST00000490283 BAK1Q16611 211 aa12.88□□□□□ -0.35
SEC13-218ENST00000490283 STHQ8IWL8 128 aa12.88□□□□□ -0.35
SEC13-218ENST00000490283 OR51G1Q8NGK1 321 aa12.88□□□□□ -0.35
SEC13-218ENST00000490283 COQ8AQ8NI60 647 aa12.88□□□□□ -0.35
SEC13-218ENST00000490283 C7orf50Q9BRJ6 194 aaKnown RBP12.88□□□□□ -0.35
SEC13-218ENST00000490283 A0A0J9YWU9 116 aa12.87□□□□□ -0.35
SEC13-218ENST00000490283 LCE6AA0A183 80 aa12.87□□□□□ -0.35
SEC13-218ENST00000490283 JTBO76095 146 aa12.87□□□□□ -0.35
SEC13-218ENST00000490283 GGNBP1Q5YKI7 109 aa12.87□□□□□ -0.35
SEC13-218ENST00000490283 LEMD1Q68G75 181 aa12.87□□□□□ -0.35
SEC13-218ENST00000490283 LYG2Q86SG7 212 aa12.87□□□□□ -0.35
SEC13-218ENST00000490283 GATAD1Q8WUU5 269 aa12.87□□□□□ -0.35
SEC13-218ENST00000490283 C9orf170A2RU37 121 aa12.86□□□□□ -0.35
SEC13-218ENST00000490283 K7EQG2 157 aa12.86□□□□□ -0.35
SEC13-218ENST00000490283 SYNGR2O43760 224 aa12.86□□□□□ -0.35
SEC13-218ENST00000490283 IFNA21P01568 189 aa12.86□□□□□ -0.35
SEC13-218ENST00000490283 PSG1P11464 419 aa12.86□□□□□ -0.35
SEC13-218ENST00000490283 DHRS2Q13268 280 aa12.86□□□□□ -0.35
SEC13-218ENST00000490283 USF2Q15853 346 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms