RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 DNAH7Q8WXX0 4024 aa6.82□□□□□ -1.32
HDAC6-232ENST00000489053 HELTA6NFD8 242 aa6.82□□□□□ -1.32
HDAC6-232ENST00000489053 WRBO00258 174 aa6.82□□□□□ -1.32
HDAC6-232ENST00000489053 ATP5IP56385 69 aaPredicted RBP6.82□□□□□ -1.32
HDAC6-232ENST00000489053 TIGITQ495A1 244 aa6.82□□□□□ -1.32
HDAC6-232ENST00000489053 AARDQ4LEZ3 155 aa6.82□□□□□ -1.32
HDAC6-232ENST00000489053 CASC10Q5T4H9 136 aa6.82□□□□□ -1.32
HDAC6-232ENST00000489053 CCDC190Q86UF4 302 aa6.82□□□□□ -1.32
HDAC6-232ENST00000489053 STXBP6Q8NFX7 210 aa6.82□□□□□ -1.32
HDAC6-232ENST00000489053 ST8SIA2Q92186 375 aa6.82□□□□□ -1.32
HDAC6-232ENST00000489053 TRIM63Q969Q1 353 aa6.82□□□□□ -1.32
HDAC6-232ENST00000489053 RBKSQ9H477 322 aa6.82□□□□□ -1.32
HDAC6-232ENST00000489053 ZFP92A6NM28 416 aa6.81□□□□□ -1.32
HDAC6-232ENST00000489053 UBE2CO00762 179 aa6.81□□□□□ -1.32
HDAC6-232ENST00000489053 DFFBO76075 338 aa6.81□□□□□ -1.32
HDAC6-232ENST00000489053 IFNA21P01568 189 aa6.81□□□□□ -1.32
HDAC6-232ENST00000489053 HOXB5P09067 269 aa6.81□□□□□ -1.32
HDAC6-232ENST00000489053 RD3LP0DJH9 198 aa6.81□□□□□ -1.32
HDAC6-232ENST00000489053 NUP62P37198 522 aaPredicted RBP6.81□□□□□ -1.32
HDAC6-232ENST00000489053 C4orf46Q504U0 113 aa6.81□□□□□ -1.32
HDAC6-232ENST00000489053 NMSQ5H8A3 153 aa6.81□□□□□ -1.32
HDAC6-232ENST00000489053 PRSS54Q6PEW0 395 aa6.81□□□□□ -1.32
HDAC6-232ENST00000489053 COQ8AQ8NI60 647 aa6.81□□□□□ -1.32
HDAC6-232ENST00000489053 PPP1R14BQ96C90 147 aa6.81□□□□□ -1.32
HDAC6-232ENST00000489053 CIB3Q96Q77 187 aaPredicted RBP6.81□□□□□ -1.32
HDAC6-232ENST00000489053 PBDC1Q9BVG4 233 aa6.81□□□□□ -1.32
HDAC6-232ENST00000489053 RBM38Q9H0Z9 239 aaKnown RBP6.81□□□□□ -1.32
HDAC6-232ENST00000489053 HSPB7Q9UBY9 170 aa6.81□□□□□ -1.32
HDAC6-232ENST00000489053 TMED3Q9Y3Q3 217 aa6.81□□□□□ -1.32
HDAC6-232ENST00000489053 KMT2CQ8NEZ4 4911 aaKnown RBP6.8□□□□□ -1.32
HDAC6-232ENST00000489053 KIR2DL5BA0A0G2JN68 375 aa6.8□□□□□ -1.32
HDAC6-232ENST00000489053 KIR2DL5BA0A0G2JPC4 375 aa6.8□□□□□ -1.32
HDAC6-232ENST00000489053 SPRY2O43597 315 aa6.8□□□□□ -1.32
HDAC6-232ENST00000489053 SFT2D2O95562 160 aa6.8□□□□□ -1.32
HDAC6-232ENST00000489053 IL4P05112 153 aa6.8□□□□□ -1.32
HDAC6-232ENST00000489053 HNRNPCP07910 306 aaKnown RBP eCLIP6.8□□□□□ -1.32
HDAC6-232ENST00000489053 IAPPP10997 89 aa6.8□□□□□ -1.32
HDAC6-232ENST00000489053 P2RY1P47900 373 aa6.8□□□□□ -1.32
HDAC6-232ENST00000489053 AP2S1P53680 142 aaPredicted RBP6.8□□□□□ -1.32
HDAC6-232ENST00000489053 UBE2MP61081 183 aaKnown RBP6.8□□□□□ -1.32
HDAC6-232ENST00000489053 YPEL3P61236 119 aaPredicted RBP6.8□□□□□ -1.32
HDAC6-232ENST00000489053 SUPT4H1P63272 117 aaKnown RBP6.8□□□□□ -1.32
HDAC6-232ENST00000489053 PPP1R1AQ13522 171 aa6.8□□□□□ -1.32
HDAC6-232ENST00000489053 ZNF79Q15937 498 aa6.8□□□□□ -1.32
HDAC6-232ENST00000489053 DEFB135Q30KP9 77 aa6.8□□□□□ -1.32
HDAC6-232ENST00000489053 BSXQ3C1V8 233 aa6.8□□□□□ -1.32
HDAC6-232ENST00000489053 ODF3L2Q3SX64 289 aa6.8□□□□□ -1.32
HDAC6-232ENST00000489053 LINC00322Q6ZN03 302 aaPredicted RBP6.8□□□□□ -1.32
HDAC6-232ENST00000489053 APRG1Q8IVJ8 170 aa6.8□□□□□ -1.32
HDAC6-232ENST00000489053 KIR2DL5AQ8N109 375 aa6.8□□□□□ -1.32
HDAC6-232ENST00000489053 TMEM217Q8N7C4 229 aa6.8□□□□□ -1.32
HDAC6-232ENST00000489053 KIR2DL5BQ8NHK3 375 aa6.8□□□□□ -1.32
HDAC6-232ENST00000489053 NPIPB3Q92617 1050 aa6.8□□□□□ -1.32
HDAC6-232ENST00000489053 SRRQ9GZT4 340 aa6.8□□□□□ -1.32
HDAC6-232ENST00000489053 MS4A6AQ9H2W1 248 aa6.8□□□□□ -1.32
HDAC6-232ENST00000489053 FNDC4Q9H6D8 234 aaPredicted RBP6.8□□□□□ -1.32
HDAC6-232ENST00000489053 ZFAND3Q9H8U3 227 aa6.8□□□□□ -1.32
HDAC6-232ENST00000489053 TENM2Q9NT68 2774 aa6.8□□□□□ -1.32
HDAC6-232ENST00000489053 CXorf65A6NEN9 183 aa6.79□□□□□ -1.32
HDAC6-232ENST00000489053 MPTX1A8MV57 137 aa6.79□□□□□ -1.32
HDAC6-232ENST00000489053 FAM90A26D6RGX4 464 aa6.79□□□□□ -1.32
HDAC6-232ENST00000489053 JTBO76095 146 aa6.79□□□□□ -1.32
HDAC6-232ENST00000489053 SLC25A6P12236 298 aa6.79□□□□□ -1.32
HDAC6-232ENST00000489053 S100A7P31151 101 aa6.79□□□□□ -1.32
HDAC6-232ENST00000489053 DHRS2Q13268 280 aa6.79□□□□□ -1.32
HDAC6-232ENST00000489053 MLANAQ16655 118 aa6.79□□□□□ -1.32
HDAC6-232ENST00000489053 PVRIGQ6DKI7 326 aa6.79□□□□□ -1.32
HDAC6-232ENST00000489053 Q6ZWC4 215 aa6.79□□□□□ -1.32
HDAC6-232ENST00000489053 STHQ8IWL8 128 aa6.79□□□□□ -1.32
HDAC6-232ENST00000489053 C7orf50Q9BRJ6 194 aaKnown RBP6.79□□□□□ -1.32
HDAC6-232ENST00000489053 VSIRQ9H7M9 311 aa6.79□□□□□ -1.32
HDAC6-232ENST00000489053 MAP6D1Q9H9H5 199 aa6.79□□□□□ -1.32
HDAC6-232ENST00000489053 EDA2RQ9HAV5 297 aa6.79□□□□□ -1.32
HDAC6-232ENST00000489053 TRAV2A0A0B4J234 112 aa6.78□□□□□ -1.32
HDAC6-232ENST00000489053 SMCO3A2RU48 225 aa6.78□□□□□ -1.32
HDAC6-232ENST00000489053 SYNGR2O43760 224 aa6.78□□□□□ -1.32
HDAC6-232ENST00000489053 NDUFB6O95139 128 aa6.78□□□□□ -1.32
HDAC6-232ENST00000489053 TOMM40O96008 361 aa6.78□□□□□ -1.32
HDAC6-232ENST00000489053 CA1P00915 261 aaPredicted RBP6.78□□□□□ -1.32
HDAC6-232ENST00000489053 IGKV1-17P01599 117 aa6.78□□□□□ -1.32
HDAC6-232ENST00000489053 APOHP02749 345 aaPredicted RBP6.78□□□□□ -1.32
HDAC6-232ENST00000489053 IGLC1P0CG04 106 aa6.78□□□□□ -1.32
HDAC6-232ENST00000489053 CRYBB3P26998 211 aa6.78□□□□□ -1.32
HDAC6-232ENST00000489053 GPX4P36969 197 aaPredicted RBP6.78□□□□□ -1.32
HDAC6-232ENST00000489053 DEFB131AP59861 70 aa6.78□□□□□ -1.32
HDAC6-232ENST00000489053 SNRPD3P62318 126 aaKnown RBP6.78□□□□□ -1.32
HDAC6-232ENST00000489053 CNPY1Q3B7I2 92 aa6.78□□□□□ -1.32
HDAC6-232ENST00000489053 LRTM2Q8N967 370 aa6.78□□□□□ -1.32
HDAC6-232ENST00000489053 OR51G1Q8NGK1 321 aa6.78□□□□□ -1.32
HDAC6-232ENST00000489053 OVOL2Q9BRP0 275 aa6.78□□□□□ -1.32
HDAC6-232ENST00000489053 MAGT1Q9H0U3 335 aa6.78□□□□□ -1.32
HDAC6-232ENST00000489053 CSTL1Q9H114 145 aa6.78□□□□□ -1.32
HDAC6-232ENST00000489053 MRPL36Q9P0J6 103 aaKnown RBP6.78□□□□□ -1.32
HDAC6-232ENST00000489053 TP53TG1Q9Y2A0 90 aa6.78□□□□□ -1.32
HDAC6-232ENST00000489053 STRAPQ9Y3F4 350 aaKnown RBP6.78□□□□□ -1.32
HDAC6-232ENST00000489053 C9orf170A2RU37 121 aa6.77□□□□□ -1.33
HDAC6-232ENST00000489053 SNRPGP15A8MWD9 76 aa6.77□□□□□ -1.33
HDAC6-232ENST00000489053 SCGB1D2O95969 90 aa6.77□□□□□ -1.33
HDAC6-232ENST00000489053 LYZP61626 148 aa6.77□□□□□ -1.33
HDAC6-232ENST00000489053 AKR1C1Q04828 323 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms