RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 RNASE8Q8TDE3 154 aaKnown RBP10.38□□□□□ -0.75
VPS52-218ENST00000482399 SLC25A33Q9BSK2 321 aa10.38□□□□□ -0.75
VPS52-218ENST00000482399 ALKBH7Q9BT30 221 aaPredicted RBP10.38□□□□□ -0.75
VPS52-218ENST00000482399 LSM4Q9Y4Z0 139 aaKnown RBP10.38□□□□□ -0.75
VPS52-218ENST00000482399 DMXL2Q8TDJ6 3036 aa10.38□□□□□ -0.75
VPS52-218ENST00000482399 IGLL1P15814 213 aa10.38□□□□□ -0.75
VPS52-218ENST00000482399 NIT1Q86X76 327 aa10.38□□□□□ -0.75
VPS52-218ENST00000482399 FAM90A1Q86YD7 464 aa10.38□□□□□ -0.75
VPS52-218ENST00000482399 S4R3C0 116 aa10.38□□□□□ -0.75
VPS52-218ENST00000482399 CFAP47Q6ZTR5 3102 aa10.37□□□□□ -0.75
VPS52-218ENST00000482399 FAM181BA6NEQ2 426 aa10.37□□□□□ -0.75
VPS52-218ENST00000482399 SUB1P53999 127 aaKnown RBP eCLIP10.37□□□□□ -0.75
VPS52-218ENST00000482399 COTL1Q14019 142 aa10.37□□□□□ -0.75
VPS52-218ENST00000482399 SPACA3Q8IXA5 215 aa10.37□□□□□ -0.75
VPS52-218ENST00000482399 OR1L4Q8NGR5 311 aa10.37□□□□□ -0.75
VPS52-218ENST00000482399 TMEM70Q9BUB7 260 aa10.37□□□□□ -0.75
VPS52-218ENST00000482399 LINC00614P0C842 121 aa10.37□□□□□ -0.75
VPS52-218ENST00000482399 PPOXP50336 477 aa10.37□□□□□ -0.75
VPS52-218ENST00000482399 OR10J3Q5JRS4 329 aa10.37□□□□□ -0.75
VPS52-218ENST00000482399 MUC15Q8N387 334 aa10.37□□□□□ -0.75
VPS52-218ENST00000482399 OR8A1Q8NGG7 326 aa10.37□□□□□ -0.75
VPS52-218ENST00000482399 ADTRPQ96IZ2 230 aa10.37□□□□□ -0.75
VPS52-218ENST00000482399 UPK2O00526 184 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 LOXL3P58215 753 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 FXYD7P58549 80 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 MDS2Q8NDY4 140 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 TNFRSF19Q9NS68 423 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 TECTAO75443 2155 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 TRAV9-2A0A087WT02 112 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 EBLN2Q6P2I7 272 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 LINC00173Q6ZV60 143 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 PRSS3P2Q8NHM4 247 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 TRAV9-1A0A075B6T8 112 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 J3QW42 95 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 TMEM11P17152 192 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 PRR20EP86478 221 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 PRR20CP86479 221 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 PRR20DP86480 221 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 PRR20BP86481 221 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 PRR20AP86496 221 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 CD69Q07108 199 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 FAM27E3Q08E93 113 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 MSMPQ1L6U9 139 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 COX19Q49B96 90 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 LDLRAD2Q5SZI1 272 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 RPRMLQ8N4K4 120 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 TMEM116Q8NCL8 245 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 PRR7Q8TB68 274 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 LOXL4Q96JB6 756 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 ASCL3Q9NQ33 180 aa10.36□□□□□ -0.75
VPS52-218ENST00000482399 PRCDQ00LT1 54 aa10.35□□□□□ -0.75
VPS52-218ENST00000482399 EIF4EBP1Q13541 118 aaPredicted RBP10.35□□□□□ -0.75
VPS52-218ENST00000482399 FBLN7Q53RD9 439 aa10.35□□□□□ -0.75
VPS52-218ENST00000482399 SLC25A10Q9UBX3 287 aaPredicted RBP10.35□□□□□ -0.75
VPS52-218ENST00000482399 TET2Q6N021 2002 aaPredicted RBP10.35□□□□□ -0.75
VPS52-218ENST00000482399 NKX6-3A6NJ46 265 aa10.35□□□□□ -0.75
VPS52-218ENST00000482399 CNIH1O95406 144 aa10.35□□□□□ -0.75
VPS52-218ENST00000482399 IGKV3-15P01624 115 aa10.35□□□□□ -0.75
VPS52-218ENST00000482399 CT45A6P0DMU7 189 aa10.35□□□□□ -0.75
VPS52-218ENST00000482399 CT45A5P0DMU8 189 aa10.35□□□□□ -0.75
VPS52-218ENST00000482399 CT45A7P0DMV0 189 aa10.35□□□□□ -0.75
VPS52-218ENST00000482399 COX7A1P24310 79 aa10.35□□□□□ -0.75
VPS52-218ENST00000482399 CEACAM8P31997 349 aaPredicted RBP10.35□□□□□ -0.75
VPS52-218ENST00000482399 DIAPH2-AS1Q14236 149 aa10.35□□□□□ -0.75
VPS52-218ENST00000482399 WFDC3Q8IUB2 231 aa10.35□□□□□ -0.75
VPS52-218ENST00000482399 C1orf159Q96HA4 380 aa10.35□□□□□ -0.75
VPS52-218ENST00000482399 ZNF430Q9H8G1 570 aaPredicted RBP10.35□□□□□ -0.75
VPS52-218ENST00000482399 TMEM14BQ9NUH8 114 aa10.35□□□□□ -0.75
VPS52-218ENST00000482399 FOXA2Q9Y261 457 aaPredicted RBP10.35□□□□□ -0.75
VPS52-218ENST00000482399 A0A1W2PRE2 83 aa10.35□□□□□ -0.75
VPS52-218ENST00000482399 DLL1O00548 723 aa10.35□□□□□ -0.75
VPS52-218ENST00000482399 COMPP49747 757 aaPredicted RBP10.35□□□□□ -0.75
VPS52-218ENST00000482399 GOLT1AQ6ZVE7 132 aa10.35□□□□□ -0.75
VPS52-218ENST00000482399 ZNF503Q96F45 646 aa10.35□□□□□ -0.75
VPS52-218ENST00000482399 DYNLRB1Q9NP97 96 aa10.35□□□□□ -0.75
VPS52-218ENST00000482399 A0A087X0K7 114 aa10.34□□□□□ -0.75
VPS52-218ENST00000482399 TRAV17A0A0B4J275 112 aa10.34□□□□□ -0.75
VPS52-218ENST00000482399 NBEAP1P0C6P0 100 aa10.34□□□□□ -0.75
VPS52-218ENST00000482399 FAM87AP0C7U9 286 aa10.34□□□□□ -0.75
VPS52-218ENST00000482399 TDGF1P13385 188 aa10.34□□□□□ -0.75
VPS52-218ENST00000482399 C11orf52Q96A22 123 aa10.34□□□□□ -0.75
VPS52-218ENST00000482399 RAB37Q96AX2 223 aa10.34□□□□□ -0.75
VPS52-218ENST00000482399 TMEM191AQ9H0A3 160 aa10.34□□□□□ -0.75
VPS52-218ENST00000482399 CEP295Q9C0D2 2601 aa10.34□□□□□ -0.75
VPS52-218ENST00000482399 SPAARA0A1B0GVQ0 90 aa10.34□□□□□ -0.75
VPS52-218ENST00000482399 PRSS47A8MTI9 375 aa10.34□□□□□ -0.75
VPS52-218ENST00000482399 OR5AL1P0C617 328 aa10.34□□□□□ -0.75
VPS52-218ENST00000482399 NHLH1Q02575 133 aa10.34□□□□□ -0.75
VPS52-218ENST00000482399 C17orf58Q2M2W7 97 aa10.34□□□□□ -0.75
VPS52-218ENST00000482399 FAM222BQ8WU58 562 aa10.34□□□□□ -0.75
VPS52-218ENST00000482399 TRGV8A0A0C4DH27 118 aa10.33□□□□□ -0.76
VPS52-218ENST00000482399 A8MWL6 223 aa10.33□□□□□ -0.76
VPS52-218ENST00000482399 PRR33A8MZF0 331 aa10.33□□□□□ -0.76
VPS52-218ENST00000482399 E7EUB6 86 aa10.33□□□□□ -0.76
VPS52-218ENST00000482399 RNASE2P10153 161 aaKnown RBP10.33□□□□□ -0.76
VPS52-218ENST00000482399 HBBP68871 147 aa10.33□□□□□ -0.76
VPS52-218ENST00000482399 SLC25A34Q6PIV7 304 aa10.33□□□□□ -0.76
VPS52-218ENST00000482399 FA2HQ7L5A8 372 aa10.33□□□□□ -0.76
VPS52-218ENST00000482399 SRSF12Q8WXF0 261 aaKnown RBP10.33□□□□□ -0.76
VPS52-218ENST00000482399 NEUROG1Q92886 237 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms