RNA–Protein interactions for RNA: ENST00000468704.1

TMEM50A-202, Transcript of transmembrane protein 50A, humanhuman

TSL 3

Gene TMEM50A, Length 799 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-202ENST00000468704 A0A1W2PS18 150 aa12.74□□□□□ -0.37
TMEM50A-202ENST00000468704 UBE2CO00762 179 aa12.74□□□□□ -0.37
TMEM50A-202ENST00000468704 IFNA10P01566 189 aa12.74□□□□□ -0.37
TMEM50A-202ENST00000468704 APOHP02749 345 aaPredicted RBP12.74□□□□□ -0.37
TMEM50A-202ENST00000468704 IGLC1P0CG04 106 aa12.74□□□□□ -0.37
TMEM50A-202ENST00000468704 VAMP1P23763 118 aa12.74□□□□□ -0.37
TMEM50A-202ENST00000468704 TIGITQ495A1 244 aa12.74□□□□□ -0.37
TMEM50A-202ENST00000468704 Q6ZWC4 215 aa12.74□□□□□ -0.37
TMEM50A-202ENST00000468704 GBGT1Q8N5D6 347 aa12.74□□□□□ -0.37
TMEM50A-202ENST00000468704 OR1S1Q8NH92 325 aa12.74□□□□□ -0.37
TMEM50A-202ENST00000468704 TMEM170AQ8WVE7 144 aa12.74□□□□□ -0.37
TMEM50A-202ENST00000468704 OVOL2Q9BRP0 275 aa12.74□□□□□ -0.37
TMEM50A-202ENST00000468704 MAP6D1Q9H9H5 199 aa12.74□□□□□ -0.37
TMEM50A-202ENST00000468704 TP53TG1Q9Y2A0 90 aa12.74□□□□□ -0.37
TMEM50A-202ENST00000468704 U3KQ87 197 aa12.74□□□□□ -0.37
TMEM50A-202ENST00000468704 CSMD3Q7Z407 3707 aa12.74□□□□□ -0.37
TMEM50A-202ENST00000468704 RYR3Q15413 4870 aa12.73□□□□□ -0.37
TMEM50A-202ENST00000468704 TRAV2A0A0B4J234 112 aa12.73□□□□□ -0.37
TMEM50A-202ENST00000468704 IGHV3-66A0A0C4DH42 116 aa12.73□□□□□ -0.37
TMEM50A-202ENST00000468704 DFFBO76075 338 aa12.73□□□□□ -0.37
TMEM50A-202ENST00000468704 OR10J1P30954 320 aa12.73□□□□□ -0.37
TMEM50A-202ENST00000468704 INPP1P49441 399 aa12.73□□□□□ -0.37
TMEM50A-202ENST00000468704 RBMS2Q15434 407 aaKnown RBP12.73□□□□□ -0.37
TMEM50A-202ENST00000468704 DEFB135Q30KP9 77 aa12.73□□□□□ -0.37
TMEM50A-202ENST00000468704 APRG1Q8IVJ8 170 aa12.73□□□□□ -0.37
TMEM50A-202ENST00000468704 CENPSQ8N2Z9 138 aa12.73□□□□□ -0.37
TMEM50A-202ENST00000468704 STPG3Q8N7X2 389 aa12.73□□□□□ -0.37
TMEM50A-202ENST00000468704 RBKSQ9H477 322 aa12.73□□□□□ -0.37
TMEM50A-202ENST00000468704 DNASE2O00115 360 aaPredicted RBP12.72□□□□□ -0.37
TMEM50A-202ENST00000468704 RPL35AP18077 110 aaKnown RBP12.72□□□□□ -0.37
TMEM50A-202ENST00000468704 CRYBB3P26998 211 aa12.72□□□□□ -0.37
TMEM50A-202ENST00000468704 YPEL3P61236 119 aaPredicted RBP12.72□□□□□ -0.37
TMEM50A-202ENST00000468704 RPL11P62913 178 aaKnown RBP12.72□□□□□ -0.37
TMEM50A-202ENST00000468704 TRIQKQ629K1 86 aa12.72□□□□□ -0.37
TMEM50A-202ENST00000468704 LRTM2Q8N967 370 aa12.72□□□□□ -0.37
TMEM50A-202ENST00000468704 GRAMD2BQ96HH9 432 aa12.72□□□□□ -0.37
TMEM50A-202ENST00000468704 MS4A6AQ9H2W1 248 aa12.72□□□□□ -0.37
TMEM50A-202ENST00000468704 BATF3Q9NR55 127 aa12.72□□□□□ -0.37
TMEM50A-202ENST00000468704 DYNC2H1Q8NCM8 4307 aaKnown RBP12.71□□□□□ -0.37
TMEM50A-202ENST00000468704 STARD9Q9P2P6 4700 aa12.71□□□□□ -0.37
TMEM50A-202ENST00000468704 SPRY2O43597 315 aa12.71□□□□□ -0.37
TMEM50A-202ENST00000468704 SLC25A6P12236 298 aa12.71□□□□□ -0.37
TMEM50A-202ENST00000468704 P2RY1P47900 373 aa12.71□□□□□ -0.37
TMEM50A-202ENST00000468704 ATP5IP56385 69 aaPredicted RBP12.71□□□□□ -0.37
TMEM50A-202ENST00000468704 WFDC3Q8IUB2 231 aa12.71□□□□□ -0.37
TMEM50A-202ENST00000468704 LILRB2Q8N423 598 aa12.71□□□□□ -0.37
TMEM50A-202ENST00000468704 Q8WTZ3 238 aa12.71□□□□□ -0.37
TMEM50A-202ENST00000468704 ACY3Q96HD9 319 aa12.71□□□□□ -0.37
TMEM50A-202ENST00000468704 NAP1L6A6NFF2 107 aa12.7□□□□□ -0.38
TMEM50A-202ENST00000468704 A6NHS1 94 aa12.7□□□□□ -0.38
TMEM50A-202ENST00000468704 SFT2D2O95562 160 aa12.7□□□□□ -0.38
TMEM50A-202ENST00000468704 UBE2MP61081 183 aaKnown RBP12.7□□□□□ -0.38
TMEM50A-202ENST00000468704 PPP1R1AQ13522 171 aa12.7□□□□□ -0.38
TMEM50A-202ENST00000468704 ZNF124Q15973 351 aa12.7□□□□□ -0.38
TMEM50A-202ENST00000468704 NPIPB3Q92617 1050 aa12.7□□□□□ -0.38
TMEM50A-202ENST00000468704 RABAC1Q9UI14 185 aa12.7□□□□□ -0.38
TMEM50A-202ENST00000468704 TMED3Q9Y3Q3 217 aa12.7□□□□□ -0.38
TMEM50A-202ENST00000468704 LCE6AA0A183 80 aa12.69□□□□□ -0.38
TMEM50A-202ENST00000468704 FAM90A26D6RGX4 464 aa12.69□□□□□ -0.38
TMEM50A-202ENST00000468704 PITX3O75364 302 aa12.69□□□□□ -0.38
TMEM50A-202ENST00000468704 IFNA4P05014 189 aa12.69□□□□□ -0.38
TMEM50A-202ENST00000468704 IL4P05112 153 aa12.69□□□□□ -0.38
TMEM50A-202ENST00000468704 HNRNPCP07910 306 aaKnown RBP eCLIP12.69□□□□□ -0.38
TMEM50A-202ENST00000468704 EIF2B2P49770 351 aaKnown RBP12.69□□□□□ -0.38
TMEM50A-202ENST00000468704 STXBP6Q8NFX7 210 aa12.69□□□□□ -0.38
TMEM50A-202ENST00000468704 MED6O75586 246 aa12.68□□□□□ -0.38
TMEM50A-202ENST00000468704 TOMM40O96008 361 aa12.68□□□□□ -0.38
TMEM50A-202ENST00000468704 RNF183Q96D59 192 aa12.68□□□□□ -0.38
TMEM50A-202ENST00000468704 U3KQE9 123 aa12.68□□□□□ -0.38
TMEM50A-202ENST00000468704 HELTA6NFD8 242 aa12.67□□□□□ -0.38
TMEM50A-202ENST00000468704 MPTX1A8MV57 137 aa12.67□□□□□ -0.38
TMEM50A-202ENST00000468704 K7EQG2 157 aa12.67□□□□□ -0.38
TMEM50A-202ENST00000468704 NDUFB6O95139 128 aa12.67□□□□□ -0.38
TMEM50A-202ENST00000468704 DEFB131AP59861 70 aa12.67□□□□□ -0.38
TMEM50A-202ENST00000468704 USF2Q15853 346 aaPredicted RBP12.67□□□□□ -0.38
TMEM50A-202ENST00000468704 BAK1Q16611 211 aa12.67□□□□□ -0.38
TMEM50A-202ENST00000468704 SLC35E1Q96K37 410 aa12.67□□□□□ -0.38
TMEM50A-202ENST00000468704 CIB3Q96Q77 187 aaPredicted RBP12.67□□□□□ -0.38
TMEM50A-202ENST00000468704 CSTL1Q9H114 145 aa12.67□□□□□ -0.38
TMEM50A-202ENST00000468704 A0A0J9YWU9 116 aa12.66□□□□□ -0.38
TMEM50A-202ENST00000468704 RD3LP0DJH9 198 aa12.66□□□□□ -0.38
TMEM50A-202ENST00000468704 IAPPP10997 89 aa12.66□□□□□ -0.38
TMEM50A-202ENST00000468704 GPX4P36969 197 aaPredicted RBP12.66□□□□□ -0.38
TMEM50A-202ENST00000468704 RAB11AP62491 216 aa12.66□□□□□ -0.38
TMEM50A-202ENST00000468704 LYG2Q86SG7 212 aa12.66□□□□□ -0.38
TMEM50A-202ENST00000468704 FAM24BQ8N5W8 94 aa12.66□□□□□ -0.38
TMEM50A-202ENST00000468704 GLMPQ8WWB7 406 aa12.66□□□□□ -0.38
TMEM50A-202ENST00000468704 CENPXA8MT69 81 aa12.65□□□□□ -0.38
TMEM50A-202ENST00000468704 HOXB5P09067 269 aa12.65□□□□□ -0.38
TMEM50A-202ENST00000468704 NUP62P37198 522 aaPredicted RBP12.65□□□□□ -0.38
TMEM50A-202ENST00000468704 LEMD1Q68G75 181 aa12.65□□□□□ -0.38
TMEM50A-202ENST00000468704 C16orf54Q6UWD8 224 aa12.65□□□□□ -0.38
TMEM50A-202ENST00000468704 OR51G1Q8NGK1 321 aa12.65□□□□□ -0.38
TMEM50A-202ENST00000468704 DCANP1Q8TF63 244 aa12.65□□□□□ -0.38
TMEM50A-202ENST00000468704 GATAD1Q8WUU5 269 aa12.65□□□□□ -0.38
TMEM50A-202ENST00000468704 RNF125Q96EQ8 232 aa12.65□□□□□ -0.38
TMEM50A-202ENST00000468704 SDHCQ99643 169 aaPredicted RBP12.65□□□□□ -0.38
TMEM50A-202ENST00000468704 C7orf50Q9BRJ6 194 aaKnown RBP12.65□□□□□ -0.38
TMEM50A-202ENST00000468704 C9orf170A2RU37 121 aa12.64□□□□□ -0.39
TMEM50A-202ENST00000468704 ZFP92A6NM28 416 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms