RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 MED6O75586 246 aa13.86□□□□□ -0.19
CDKN1A-206ENST00000462537 ADAP1O75689 374 aa13.86□□□□□ -0.19
CDKN1A-206ENST00000462537 OR10J1P30954 320 aa13.86□□□□□ -0.19
CDKN1A-206ENST00000462537 ACY3Q96HD9 319 aa13.86□□□□□ -0.19
CDKN1A-206ENST00000462537 MAGT1Q9H0U3 335 aa13.86□□□□□ -0.19
CDKN1A-206ENST00000462537 C20orf85Q9H1P6 137 aa13.86□□□□□ -0.19
CDKN1A-206ENST00000462537 UBQLN2Q9UHD9 624 aa13.86□□□□□ -0.19
CDKN1A-206ENST00000462537 IGKV3-7A0A075B6H7 116 aa13.85□□□□□ -0.19
CDKN1A-206ENST00000462537 OR4C46A6NHA9 309 aa13.85□□□□□ -0.19
CDKN1A-206ENST00000462537 IFNA21P01568 189 aa13.85□□□□□ -0.19
CDKN1A-206ENST00000462537 IGKV1-17P01599 117 aa13.85□□□□□ -0.19
CDKN1A-206ENST00000462537 LINC00299Q6ZSB3 139 aa13.85□□□□□ -0.19
CDKN1A-206ENST00000462537 NPIPB3Q92617 1050 aa13.85□□□□□ -0.19
CDKN1A-206ENST00000462537 SPATA25Q9BR10 227 aa13.85□□□□□ -0.19
CDKN1A-206ENST00000462537 IGHV3-66A0A0C4DH42 116 aa13.84□□□□□ -0.19
CDKN1A-206ENST00000462537 RBMY1BA6NDE4 496 aaKnown RBP13.84□□□□□ -0.19
CDKN1A-206ENST00000462537 RBMY1EA6NEQ0 496 aaKnown RBP13.84□□□□□ -0.19
CDKN1A-206ENST00000462537 APOHP02749 345 aaPredicted RBP13.84□□□□□ -0.19
CDKN1A-206ENST00000462537 RBMY1DP0C7P1 496 aaKnown RBP13.84□□□□□ -0.19
CDKN1A-206ENST00000462537 IGLC1P0CG04 106 aa13.84□□□□□ -0.19
CDKN1A-206ENST00000462537 NPPCP23582 126 aa13.84□□□□□ -0.19
CDKN1A-206ENST00000462537 TFPI2P48307 235 aa13.84□□□□□ -0.19
CDKN1A-206ENST00000462537 ATP5IP56385 69 aaPredicted RBP13.84□□□□□ -0.19
CDKN1A-206ENST00000462537 RAB11AP62491 216 aa13.84□□□□□ -0.19
CDKN1A-206ENST00000462537 ST8SIA2Q92186 375 aa13.84□□□□□ -0.19
CDKN1A-206ENST00000462537 METTL26Q96S19 204 aa13.84□□□□□ -0.19
CDKN1A-206ENST00000462537 WRBO00258 174 aa13.83□□□□□ -0.2
CDKN1A-206ENST00000462537 SYNGR2O43760 224 aa13.83□□□□□ -0.2
CDKN1A-206ENST00000462537 RPP30P78346 268 aaKnown RBP13.83□□□□□ -0.2
CDKN1A-206ENST00000462537 TCF24Q7RTU0 167 aa13.83□□□□□ -0.2
CDKN1A-206ENST00000462537 Q8WTZ3 238 aa13.83□□□□□ -0.2
CDKN1A-206ENST00000462537 NARS2Q96I59 477 aaKnown RBP13.83□□□□□ -0.2
CDKN1A-206ENST00000462537 SLC35E1Q96K37 410 aa13.83□□□□□ -0.2
CDKN1A-206ENST00000462537 CIB3Q96Q77 187 aaPredicted RBP13.83□□□□□ -0.2
CDKN1A-206ENST00000462537 TMEM231Q9H6L2 316 aa13.83□□□□□ -0.2
CDKN1A-206ENST00000462537 TRAV6A0A075B6T7 132 aa13.82□□□□□ -0.2
CDKN1A-206ENST00000462537 TCRBP04435 133 aa13.82□□□□□ -0.2
CDKN1A-206ENST00000462537 YPEL3P61236 119 aaPredicted RBP13.82□□□□□ -0.2
CDKN1A-206ENST00000462537 RPL11P62913 178 aaKnown RBP13.82□□□□□ -0.2
CDKN1A-206ENST00000462537 LINC00322Q6ZN03 302 aaPredicted RBP13.82□□□□□ -0.2
CDKN1A-206ENST00000462537 GBGT1Q8N5D6 347 aa13.82□□□□□ -0.2
CDKN1A-206ENST00000462537 VSIRQ9H7M9 311 aa13.82□□□□□ -0.2
CDKN1A-206ENST00000462537 PTTG2Q9NZH5 202 aa13.82□□□□□ -0.2
CDKN1A-206ENST00000462537 A0A1W2PS18 150 aa13.81□□□□□ -0.2
CDKN1A-206ENST00000462537 MPTX1A8MV57 137 aa13.81□□□□□ -0.2
CDKN1A-206ENST00000462537 CD5P06127 495 aa13.81□□□□□ -0.2
CDKN1A-206ENST00000462537 GPX4P36969 197 aaPredicted RBP13.81□□□□□ -0.2
CDKN1A-206ENST00000462537 PAFAH1B2P68402 229 aa13.81□□□□□ -0.2
CDKN1A-206ENST00000462537 NUDT15Q9NV35 164 aa13.81□□□□□ -0.2
CDKN1A-206ENST00000462537 DFFBO76075 338 aa13.8□□□□□ -0.2
CDKN1A-206ENST00000462537 IL4P05112 153 aa13.8□□□□□ -0.2
CDKN1A-206ENST00000462537 CRYBB3P26998 211 aa13.8□□□□□ -0.2
CDKN1A-206ENST00000462537 ODF3L2Q3SX64 289 aa13.8□□□□□ -0.2
CDKN1A-206ENST00000462537 MZT2BQ6NZ67 158 aa13.8□□□□□ -0.2
CDKN1A-206ENST00000462537 WFDC3Q8IUB2 231 aa13.8□□□□□ -0.2
CDKN1A-206ENST00000462537 GRAMD2BQ96HH9 432 aa13.8□□□□□ -0.2
CDKN1A-206ENST00000462537 GGTLC1Q9BX51 225 aa13.8□□□□□ -0.2
CDKN1A-206ENST00000462537 WDR12Q9GZL7 423 aaKnown RBP13.8□□□□□ -0.2
CDKN1A-206ENST00000462537 RETNQ9HD89 108 aa13.8□□□□□ -0.2
CDKN1A-206ENST00000462537 LOC102724200A0A096LPH7 203 aaPredicted RBP13.79□□□□□ -0.2
CDKN1A-206ENST00000462537 FAM240BA0A1B0GVZ2 78 aa13.79□□□□□ -0.2
CDKN1A-206ENST00000462537 ZFP92A6NM28 416 aa13.79□□□□□ -0.2
CDKN1A-206ENST00000462537 H3BP45 60 aa13.79□□□□□ -0.2
CDKN1A-206ENST00000462537 DNASE2O00115 360 aaPredicted RBP13.79□□□□□ -0.2
CDKN1A-206ENST00000462537 TOMM40O96008 361 aa13.79□□□□□ -0.2
CDKN1A-206ENST00000462537 RD3LP0DJH9 198 aa13.79□□□□□ -0.2
CDKN1A-206ENST00000462537 NKX2-1P43699 371 aaPredicted RBP13.79□□□□□ -0.2
CDKN1A-206ENST00000462537 GAMTQ14353 236 aa13.79□□□□□ -0.2
CDKN1A-206ENST00000462537 ZNF846Q147U1 533 aa13.79□□□□□ -0.2
CDKN1A-206ENST00000462537 IAH1Q2TAA2 248 aaPredicted RBP13.79□□□□□ -0.2
CDKN1A-206ENST00000462537 SPANXN5Q5MJ07 72 aa13.79□□□□□ -0.2
CDKN1A-206ENST00000462537 FAM90A2PQ658T7 463 aa13.79□□□□□ -0.2
CDKN1A-206ENST00000462537 LILRB2Q8N423 598 aa13.79□□□□□ -0.2
CDKN1A-206ENST00000462537 MITD1Q8WV92 249 aa13.79□□□□□ -0.2
CDKN1A-206ENST00000462537 CITED4Q96RK1 184 aa13.79□□□□□ -0.2
CDKN1A-206ENST00000462537 SSSCA1O60232 199 aa13.78□□□□□ -0.2
CDKN1A-206ENST00000462537 SCGB1D2O95969 90 aa13.78□□□□□ -0.2
CDKN1A-206ENST00000462537 HNRNPCP07910 306 aaKnown RBP eCLIP13.78□□□□□ -0.2
CDKN1A-206ENST00000462537 POLR2GP62487 172 aaKnown RBP eCLIP13.78□□□□□ -0.2
CDKN1A-206ENST00000462537 OR4D5Q8NGN0 318 aa13.78□□□□□ -0.2
CDKN1A-206ENST00000462537 FAM110AQ9BQ89 295 aa13.78□□□□□ -0.2
CDKN1A-206ENST00000462537 MS4A6AQ9H2W1 248 aa13.78□□□□□ -0.2
CDKN1A-206ENST00000462537 RABAC1Q9UI14 185 aa13.78□□□□□ -0.2
CDKN1A-206ENST00000462537 STRAPQ9Y3F4 350 aaKnown RBP13.78□□□□□ -0.2
CDKN1A-206ENST00000462537 H2AFB2P0C5Z0 115 aa13.77□□□□□ -0.21
CDKN1A-206ENST00000462537 PSG1P11464 419 aa13.77□□□□□ -0.21
CDKN1A-206ENST00000462537 P2RY1P47900 373 aa13.77□□□□□ -0.21
CDKN1A-206ENST00000462537 CMC4P56277 68 aaPredicted RBP13.77□□□□□ -0.21
CDKN1A-206ENST00000462537 ID3Q02535 119 aa13.77□□□□□ -0.21
CDKN1A-206ENST00000462537 APRG1Q8IVJ8 170 aa13.77□□□□□ -0.21
CDKN1A-206ENST00000462537 SEC22CQ9BRL7 303 aa13.77□□□□□ -0.21
CDKN1A-206ENST00000462537 BATF3Q9NR55 127 aa13.77□□□□□ -0.21
CDKN1A-206ENST00000462537 PSENENQ9NZ42 101 aa13.77□□□□□ -0.21
CDKN1A-206ENST00000462537 GSKIPQ9P0R6 139 aa13.77□□□□□ -0.21
CDKN1A-206ENST00000462537 TBC1D24Q9ULP9 559 aa13.77□□□□□ -0.21
CDKN1A-206ENST00000462537 HUWE1Q7Z6Z7 4374 aaKnown RBP13.77□□□□□ -0.21
CDKN1A-206ENST00000462537 ASAH1Q13510 395 aa13.76□□□□□ -0.21
CDKN1A-206ENST00000462537 USF2Q15853 346 aaPredicted RBP13.76□□□□□ -0.21
CDKN1A-206ENST00000462537 ZBTB8BQ8NAP8 495 aaPredicted RBP13.76□□□□□ -0.21
CDKN1A-206ENST00000462537 STXBP6Q8NFX7 210 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms