RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 DIRC2Q96SL1 478 aa11.86□□□□□ -0.51
NCL-207ENST00000461347 C20orf144Q9BQM9 153 aa11.86□□□□□ -0.51
NCL-207ENST00000461347 ZNF883P0CG24 379 aa11.86□□□□□ -0.51
NCL-207ENST00000461347 NUDT10Q8NFP7 164 aa11.86□□□□□ -0.51
NCL-207ENST00000461347 NUDT11Q96G61 164 aa11.86□□□□□ -0.51
NCL-207ENST00000461347 SLC25A33Q9BSK2 321 aa11.86□□□□□ -0.51
NCL-207ENST00000461347 SP9P0CG40 484 aa11.86□□□□□ -0.51
NCL-207ENST00000461347 PPOXP50336 477 aa11.86□□□□□ -0.51
NCL-207ENST00000461347 MUC15Q8N387 334 aa11.86□□□□□ -0.51
NCL-207ENST00000461347 TRBV20OR9-2A0A075B6H5 130 aa11.85□□□□□ -0.51
NCL-207ENST00000461347 ZNF785A8K8V0 405 aa11.85□□□□□ -0.51
NCL-207ENST00000461347 TDRG1Q3Y452 100 aa11.85□□□□□ -0.51
NCL-207ENST00000461347 SNRNP40Q96DI7 357 aaKnown RBP11.85□□□□□ -0.51
NCL-207ENST00000461347 TIMD4Q96H15 378 aa11.85□□□□□ -0.51
NCL-207ENST00000461347 CDH23Q9H251 3354 aa11.85□□□□□ -0.51
NCL-207ENST00000461347 TRAV9-2A0A087WT02 112 aa11.85□□□□□ -0.51
NCL-207ENST00000461347 HLA-DRB1P01911 266 aa11.85□□□□□ -0.51
NCL-207ENST00000461347 PRSS1P07477 247 aa11.85□□□□□ -0.51
NCL-207ENST00000461347 SCNM1Q9BWG6 230 aa11.85□□□□□ -0.51
NCL-207ENST00000461347 RPP21Q9H633 154 aaKnown RBP11.85□□□□□ -0.51
NCL-207ENST00000461347 LRP4O75096 1905 aa11.85□□□□□ -0.51
NCL-207ENST00000461347 TMEM186Q96B77 213 aa11.85□□□□□ -0.51
NCL-207ENST00000461347 AP5S1Q9NUS5 200 aa11.85□□□□□ -0.51
NCL-207ENST00000461347 IGKV3-15P01624 115 aa11.84□□□□□ -0.51
NCL-207ENST00000461347 FTH1P19P0C7X4 201 aa11.84□□□□□ -0.51
NCL-207ENST00000461347 ZNF134P52741 427 aa11.84□□□□□ -0.51
NCL-207ENST00000461347 RPUSD1Q9UJJ7 312 aaKnown RBP11.84□□□□□ -0.51
NCL-207ENST00000461347 SPTBN5Q9NRC6 3674 aaKnown RBP11.84□□□□□ -0.51
NCL-207ENST00000461347 ORM1P02763 201 aa11.84□□□□□ -0.51
NCL-207ENST00000461347 NMUP48645 174 aa11.84□□□□□ -0.51
NCL-207ENST00000461347 LY96Q9Y6Y9 160 aa11.84□□□□□ -0.51
NCL-207ENST00000461347 A0A1W2PS18 150 aa11.84□□□□□ -0.51
NCL-207ENST00000461347 EPDR1Q9UM22 224 aa11.84□□□□□ -0.51
NCL-207ENST00000461347 MUC21A0A0G2JKD1 596 aa11.83□□□□□ -0.52
NCL-207ENST00000461347 MUC21A0A140T8X8 626 aa11.83□□□□□ -0.52
NCL-207ENST00000461347 FBLL1A6NHQ2 334 aaKnown RBP11.83□□□□□ -0.52
NCL-207ENST00000461347 C10orf142B7Z368 130 aa11.83□□□□□ -0.52
NCL-207ENST00000461347 M0QZ24 198 aa11.83□□□□□ -0.52
NCL-207ENST00000461347 LIPFP07098 398 aa11.83□□□□□ -0.52
NCL-207ENST00000461347 Q0VG73 95 aa11.83□□□□□ -0.52
NCL-207ENST00000461347 MUC21Q5SSG8 566 aa11.83□□□□□ -0.52
NCL-207ENST00000461347 S4R3C0 116 aa11.83□□□□□ -0.52
NCL-207ENST00000461347 PMS2P5A8MQ11 134 aa11.83□□□□□ -0.52
NCL-207ENST00000461347 TM4SF5O14894 197 aa11.83□□□□□ -0.52
NCL-207ENST00000461347 CD40P25942 277 aa11.83□□□□□ -0.52
NCL-207ENST00000461347 SRSF6Q13247 344 aaKnown RBP11.83□□□□□ -0.52
NCL-207ENST00000461347 ZFP30Q9Y2G7 519 aa11.83□□□□□ -0.52
NCL-207ENST00000461347 HILPDAQ9Y5L2 63 aa11.83□□□□□ -0.52
NCL-207ENST00000461347 LINC00312Q9Y6C7 94 aa11.83□□□□□ -0.52
NCL-207ENST00000461347 K7EN84 100 aa11.83□□□□□ -0.52
NCL-207ENST00000461347 FCGR2BP31994 310 aaPredicted RBP11.83□□□□□ -0.52
NCL-207ENST00000461347 NIT1Q86X76 327 aa11.83□□□□□ -0.52
NCL-207ENST00000461347 ZNF257Q9Y2Q1 563 aa11.83□□□□□ -0.52
NCL-207ENST00000461347 V9GYV3 84 aa11.83□□□□□ -0.52
NCL-207ENST00000461347 GGTLC3B5MD39 225 aa11.82□□□□□ -0.52
NCL-207ENST00000461347 C15orf65H3BRN8 121 aa11.82□□□□□ -0.52
NCL-207ENST00000461347 RPL11P62913 178 aaKnown RBP11.82□□□□□ -0.52
NCL-207ENST00000461347 C2orf83Q53S99 150 aa11.82□□□□□ -0.52
NCL-207ENST00000461347 TSKUQ8WUA8 353 aa11.82□□□□□ -0.52
NCL-207ENST00000461347 C5orf30Q96GV9 206 aa11.82□□□□□ -0.52
NCL-207ENST00000461347 CLEC7AQ9BXN2 247 aa11.82□□□□□ -0.52
NCL-207ENST00000461347 TCRBV4S1A1TA0A5B7 111 aa11.82□□□□□ -0.52
NCL-207ENST00000461347 PDLIM4P50479 330 aa11.82□□□□□ -0.52
NCL-207ENST00000461347 RPL24P83731 157 aaKnown RBP11.82□□□□□ -0.52
NCL-207ENST00000461347 MBNL2Q5VZF2 373 aaKnown RBP11.82□□□□□ -0.52
NCL-207ENST00000461347 NUP35Q8NFH5 326 aa11.82□□□□□ -0.52
NCL-207ENST00000461347 ALKBH7Q9BT30 221 aaPredicted RBP11.82□□□□□ -0.52
NCL-207ENST00000461347 Q9H3A6 140 aa11.82□□□□□ -0.52
NCL-207ENST00000461347 PLXNB1O43157 2135 aa11.82□□□□□ -0.52
NCL-207ENST00000461347 OR2J3O76001 311 aa11.82□□□□□ -0.52
NCL-207ENST00000461347 CD59P13987 128 aa11.82□□□□□ -0.52
NCL-207ENST00000461347 TMEM30BQ3MIR4 351 aa11.82□□□□□ -0.52
NCL-207ENST00000461347 DUX4L9Q6RFH8 374 aaPredicted RBP11.82□□□□□ -0.52
NCL-207ENST00000461347 RAB37Q96AX2 223 aa11.82□□□□□ -0.52
NCL-207ENST00000461347 FBXL15Q9H469 300 aa11.82□□□□□ -0.52
NCL-207ENST00000461347 K7ERU9 68 aa11.81□□□□□ -0.52
NCL-207ENST00000461347 IGHV1-46P01743 117 aa11.81□□□□□ -0.52
NCL-207ENST00000461347 RIPPLY3P57055 190 aa11.81□□□□□ -0.52
NCL-207ENST00000461347 ASCL5Q7RTU5 278 aa11.81□□□□□ -0.52
NCL-207ENST00000461347 CPAMD8Q8IZJ3 1885 aa11.81□□□□□ -0.52
NCL-207ENST00000461347 FAM90A27PA6NNH2 459 aa11.81□□□□□ -0.52
NCL-207ENST00000461347 F2RL2O00254 374 aa11.81□□□□□ -0.52
NCL-207ENST00000461347 LGALS7P47929 136 aa11.81□□□□□ -0.52
NCL-207ENST00000461347 TMEM136Q6ZRR5 245 aa11.81□□□□□ -0.52
NCL-207ENST00000461347 RCHY1Q96PM5 261 aa11.81□□□□□ -0.52
NCL-207ENST00000461347 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.81□□□□□ -0.521e-10■■■□□ 18.4
NCL-207ENST00000461347 GAGE10A6NGK3 116 aa11.81□□□□□ -0.52
NCL-207ENST00000461347 LDLRAD2Q5SZI1 272 aa11.81□□□□□ -0.52
NCL-207ENST00000461347 RBPMS2Q6ZRY4 209 aaKnown RBP11.81□□□□□ -0.52
NCL-207ENST00000461347 GTF2H5Q6ZYL4 71 aa11.81□□□□□ -0.52
NCL-207ENST00000461347 OR10AG1Q8NH19 301 aa11.81□□□□□ -0.52
NCL-207ENST00000461347 BDP1A6H8Y1 2624 aa11.81□□□□□ -0.52
NCL-207ENST00000461347 NOTCH3Q9UM47 2321 aa11.8□□□□□ -0.52
NCL-207ENST00000461347 IGHV3-35A0A0C4DH35 117 aa11.8□□□□□ -0.52
NCL-207ENST00000461347 APOHP02749 345 aaPredicted RBP11.8□□□□□ -0.52
NCL-207ENST00000461347 RNASE2P10153 161 aaKnown RBP11.8□□□□□ -0.52
NCL-207ENST00000461347 DAZAP2Q15038 168 aaPredicted RBP11.8□□□□□ -0.52
NCL-207ENST00000461347 VWC2Q2TAL6 325 aa11.8□□□□□ -0.52
NCL-207ENST00000461347 C11orf53Q8IXP5 236 aa11.8□□□□□ -0.52
NCL-207ENST00000461347 TMEM14BQ9NUH8 114 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms