RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 C19orf84I3L1E1 186 aa1.55□□□□□ -2.16
VBP1-202ENST00000460509 PGLYRP1O75594 196 aaPredicted RBP1.55□□□□□ -2.16
VBP1-202ENST00000460509 MSNP26038 577 aaKnown RBP1.55□□□□□ -2.16
VBP1-202ENST00000460509 EVX1P49640 407 aa1.55□□□□□ -2.16
VBP1-202ENST00000460509 KISS1Q15726 138 aa1.55□□□□□ -2.16
VBP1-202ENST00000460509 LINC01554Q52M75 96 aa1.55□□□□□ -2.16
VBP1-202ENST00000460509 SPANXN3Q5MJ09 141 aa1.55□□□□□ -2.16
VBP1-202ENST00000460509 DCUN1D2Q6PH85 259 aa1.55□□□□□ -2.16
VBP1-202ENST00000460509 ZNF705AQ6ZN79 300 aaPredicted RBP1.55□□□□□ -2.16
VBP1-202ENST00000460509 DEFB119Q8N690 84 aa1.55□□□□□ -2.16
VBP1-202ENST00000460509 OR52R1Q8NGF1 315 aa1.55□□□□□ -2.16
VBP1-202ENST00000460509 RMND5BQ96G75 393 aaPredicted RBP1.55□□□□□ -2.16
VBP1-202ENST00000460509 PBDC1Q9BVG4 233 aa1.55□□□□□ -2.16
VBP1-202ENST00000460509 IMUPQ9GZP8 106 aa1.55□□□□□ -2.16
VBP1-202ENST00000460509 GINS2Q9Y248 185 aa1.55□□□□□ -2.16
VBP1-202ENST00000460509 CR1P17927 2039 aa1.55□□□□□ -2.16
VBP1-202ENST00000460509 MDC1Q14676 2089 aaKnown RBP1.55□□□□□ -2.16
VBP1-202ENST00000460509 CD109Q6YHK3 1445 aa1.55□□□□□ -2.16
VBP1-202ENST00000460509 SCN9AQ15858 1988 aa1.54□□□□□ -2.16
VBP1-202ENST00000460509 RIIAD1A6NNX1 92 aa1.54□□□□□ -2.16
VBP1-202ENST00000460509 ZNF705FA8MVS1 300 aaPredicted RBP1.54□□□□□ -2.16
VBP1-202ENST00000460509 IFNA14P01570 189 aa1.54□□□□□ -2.16
VBP1-202ENST00000460509 MSMBP08118 114 aa1.54□□□□□ -2.16
VBP1-202ENST00000460509 RPL28P46779 137 aaKnown RBP1.54□□□□□ -2.16
VBP1-202ENST00000460509 SURF2Q15527 256 aaPredicted RBP1.54□□□□□ -2.16
VBP1-202ENST00000460509 LTC4SQ16873 150 aa1.54□□□□□ -2.16
VBP1-202ENST00000460509 TMEM155Q4W5P6 130 aa1.54□□□□□ -2.16
VBP1-202ENST00000460509 FAM24BQ8N5W8 94 aa1.54□□□□□ -2.16
VBP1-202ENST00000460509 OR10J5Q8NHC4 309 aa1.54□□□□□ -2.16
VBP1-202ENST00000460509 MALSU1Q96EH3 234 aa1.54□□□□□ -2.16
VBP1-202ENST00000460509 ADAT3Q96EY9 351 aaPredicted RBP1.54□□□□□ -2.16
VBP1-202ENST00000460509 NAA38Q9BRA0 125 aaKnown RBP1.54□□□□□ -2.16
VBP1-202ENST00000460509 TMEM70Q9BUB7 260 aa1.54□□□□□ -2.16
VBP1-202ENST00000460509 KRTAP4-1Q9BYQ7 146 aa1.54□□□□□ -2.16
VBP1-202ENST00000460509 BATF3Q9NR55 127 aa1.54□□□□□ -2.16
VBP1-202ENST00000460509 ERGIC3Q9Y282 383 aa1.54□□□□□ -2.16
VBP1-202ENST00000460509 MED1Q15648 1581 aaPredicted RBP1.54□□□□□ -2.16
VBP1-202ENST00000460509 CEP152O94986 1710 aa1.54□□□□□ -2.16
VBP1-202ENST00000460509 IGHV3-64A0A075B6Q5 118 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 TMEM212A6NML5 194 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 H3BT86 120 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 TECPR2O15040 1411 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 BANF1O75531 89 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 PIAS1O75925 651 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 APOA2P02652 100 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 PPBPP02775 128 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 SCGB1A1P11684 91 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 S100GP29377 79 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 CASP1P29466 404 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 NCAPD3P42695 1498 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 TPI1P60174 286 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 S100A12P80511 92 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 CAMSAP2Q08AD1 1489 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 RRN3P1Q2M238 152 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 SCGB2B2Q4G0G5 96 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 TMEM128Q5BJH2 165 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 PRRC2BQ5JSZ5 2229 aaKnown RBP1.53□□□□□ -2.16
VBP1-202ENST00000460509 LYRM7Q5U5X0 104 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 SAMD13Q5VXD3 122 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 MIR17HGQ75NE6 70 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 C12orf29Q8N999 325 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 NUP35Q8NFH5 326 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 PFN4Q8NHR9 129 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 DYDC1Q8WWB3 177 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 SLAMF6Q96DU3 332 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 IMMP2LQ96T52 175 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 HSPB11Q9Y547 144 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 TIMM9Q9Y5J7 89 aa1.53□□□□□ -2.16
VBP1-202ENST00000460509 CPDO75976 1380 aa1.52□□□□□ -2.17
VBP1-202ENST00000460509 KIF24Q5T7B8 1368 aa1.52□□□□□ -2.17
VBP1-202ENST00000460509 TRAV7A0A075B6U4 112 aa1.52□□□□□ -2.17
VBP1-202ENST00000460509 E7EQ34 232 aa1.52□□□□□ -2.17
VBP1-202ENST00000460509 M0R378 163 aa1.52□□□□□ -2.17
VBP1-202ENST00000460509 CYB5BO43169 146 aa1.52□□□□□ -2.17
VBP1-202ENST00000460509 CREBL2O60519 120 aaPredicted RBP1.52□□□□□ -2.17
VBP1-202ENST00000460509 NAPSAO96009 420 aa1.52□□□□□ -2.17
VBP1-202ENST00000460509 CLPSP04118 112 aa1.52□□□□□ -2.17
VBP1-202ENST00000460509 RNASE4P34096 147 aaKnown RBP1.52□□□□□ -2.17
VBP1-202ENST00000460509 YPEL3P61236 119 aaPredicted RBP1.52□□□□□ -2.17
VBP1-202ENST00000460509 SUPT4H1P63272 117 aaKnown RBP1.52□□□□□ -2.17
VBP1-202ENST00000460509 LYZL1Q6UWQ5 148 aa1.52□□□□□ -2.17
VBP1-202ENST00000460509 RPP25LQ8N5L8 163 aaKnown RBP1.52□□□□□ -2.17
VBP1-202ENST00000460509 TMEM35BQ8NCS4 154 aa1.52□□□□□ -2.17
VBP1-202ENST00000460509 ST6GALNAC3Q8NDV1 305 aa1.52□□□□□ -2.17
VBP1-202ENST00000460509 GRPEL2Q8TAA5 225 aa1.52□□□□□ -2.17
VBP1-202ENST00000460509 WFDC5Q8TCV5 224 aa1.52□□□□□ -2.17
VBP1-202ENST00000460509 THEM6Q8WUY1 208 aa1.52□□□□□ -2.17
VBP1-202ENST00000460509 SKA2Q8WVK7 121 aaPredicted RBP1.52□□□□□ -2.17
VBP1-202ENST00000460509 SCGB3A1Q96QR1 104 aa1.52□□□□□ -2.17
VBP1-202ENST00000460509 DOHHQ9BU89 302 aa1.52□□□□□ -2.17
VBP1-202ENST00000460509 EFCAB11Q9BUY7 163 aa1.52□□□□□ -2.17
VBP1-202ENST00000460509 RTL8AQ9BWD3 113 aa1.52□□□□□ -2.17
VBP1-202ENST00000460509 SLC39A9Q9NUM3 307 aa1.52□□□□□ -2.17
VBP1-202ENST00000460509 OR52A1Q9UKL2 312 aa1.52□□□□□ -2.17
VBP1-202ENST00000460509 PCTPQ9UKL6 214 aa1.52□□□□□ -2.17
VBP1-202ENST00000460509 KIF13BQ9NQT8 1826 aa1.52□□□□□ -2.17
VBP1-202ENST00000460509 TRPM1Q7Z4N2 1603 aa1.51□□□□□ -2.17
VBP1-202ENST00000460509 SCAF11Q99590 1463 aaKnown RBP1.51□□□□□ -2.17
VBP1-202ENST00000460509 ARHGEF10O15013 1369 aa1.51□□□□□ -2.17
VBP1-202ENST00000460509 DUXBA0A1W2PPF3 345 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms