RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 RND2P52198 227 aa13.98□□□□□ -0.17
COL5A1-203ENST00000460264 CMC4P56277 68 aaPredicted RBP13.98□□□□□ -0.17
COL5A1-203ENST00000460264 PAFAH1B2P68402 229 aa13.98□□□□□ -0.17
COL5A1-203ENST00000460264 SMCO1Q147U7 214 aa13.98□□□□□ -0.17
COL5A1-203ENST00000460264 ZNF124Q15973 351 aa13.98□□□□□ -0.17
COL5A1-203ENST00000460264 TMED4Q7Z7H5 227 aa13.98□□□□□ -0.17
COL5A1-203ENST00000460264 WFDC3Q8IUB2 231 aa13.98□□□□□ -0.17
COL5A1-203ENST00000460264 STPG3Q8N7X2 389 aa13.98□□□□□ -0.17
COL5A1-203ENST00000460264 METTL26Q96S19 204 aa13.98□□□□□ -0.17
COL5A1-203ENST00000460264 LYSTQ99698 3801 aa13.98□□□□□ -0.17
COL5A1-203ENST00000460264 MS4A6AQ9H2W1 248 aa13.98□□□□□ -0.17
COL5A1-203ENST00000460264 TMEM231Q9H6L2 316 aa13.98□□□□□ -0.17
COL5A1-203ENST00000460264 SPRY2O43597 315 aa13.97□□□□□ -0.17
COL5A1-203ENST00000460264 CRYBB3P26998 211 aa13.97□□□□□ -0.17
COL5A1-203ENST00000460264 DEDD2Q8WXF8 326 aa13.97□□□□□ -0.17
COL5A1-203ENST00000460264 RYR2Q92736 4967 aa13.96□□□□□ -0.17
COL5A1-203ENST00000460264 OR10J1P30954 320 aa13.96□□□□□ -0.17
COL5A1-203ENST00000460264 TMEM128Q5BJH2 165 aa13.96□□□□□ -0.17
COL5A1-203ENST00000460264 NOXA1Q86UR1 476 aa13.96□□□□□ -0.17
COL5A1-203ENST00000460264 OR1S2Q8NGQ3 325 aa13.96□□□□□ -0.17
COL5A1-203ENST00000460264 DTD1Q8TEA8 209 aa13.96□□□□□ -0.17
COL5A1-203ENST00000460264 RBKSQ9H477 322 aa13.96□□□□□ -0.17
COL5A1-203ENST00000460264 TRAV2A0A0B4J234 112 aa13.95□□□□□ -0.18
COL5A1-203ENST00000460264 PIGBOS1A0A0B4J2F0 54 aa13.95□□□□□ -0.18
COL5A1-203ENST00000460264 DUXBA0A1W2PPF3 345 aa13.95□□□□□ -0.18
COL5A1-203ENST00000460264 A0A1W2PS18 150 aa13.95□□□□□ -0.18
COL5A1-203ENST00000460264 IFNA10P01566 189 aa13.95□□□□□ -0.18
COL5A1-203ENST00000460264 P2RY1P47900 373 aa13.95□□□□□ -0.18
COL5A1-203ENST00000460264 YPEL3P61236 119 aaPredicted RBP13.95□□□□□ -0.18
COL5A1-203ENST00000460264 RPL11P62913 178 aaKnown RBP13.95□□□□□ -0.18
COL5A1-203ENST00000460264 SPANXN2Q5MJ10 180 aa13.95□□□□□ -0.18
COL5A1-203ENST00000460264 ETFRF1Q6IPR1 90 aa13.95□□□□□ -0.18
COL5A1-203ENST00000460264 RNF183Q96D59 192 aa13.95□□□□□ -0.18
COL5A1-203ENST00000460264 SLC25A21Q9BQT8 299 aaPredicted RBP13.95□□□□□ -0.18
COL5A1-203ENST00000460264 DNASE2O00115 360 aaPredicted RBP13.94□□□□□ -0.18
COL5A1-203ENST00000460264 VAMP1P23763 118 aa13.94□□□□□ -0.18
COL5A1-203ENST00000460264 FAM24BQ8N5W8 94 aa13.94□□□□□ -0.18
COL5A1-203ENST00000460264 OR1S1Q8NH92 325 aa13.94□□□□□ -0.18
COL5A1-203ENST00000460264 SRRQ9GZT4 340 aa13.94□□□□□ -0.18
COL5A1-203ENST00000460264 U3KQ87 197 aa13.94□□□□□ -0.18
COL5A1-203ENST00000460264 A0A0J9YWU9 116 aa13.93□□□□□ -0.18
COL5A1-203ENST00000460264 LYG2Q86SG7 212 aa13.93□□□□□ -0.18
COL5A1-203ENST00000460264 LRTM2Q8N967 370 aa13.93□□□□□ -0.18
COL5A1-203ENST00000460264 NPIPB3Q92617 1050 aa13.93□□□□□ -0.18
COL5A1-203ENST00000460264 ACY3Q96HD9 319 aa13.93□□□□□ -0.18
COL5A1-203ENST00000460264 NARS2Q96I59 477 aaKnown RBP13.93□□□□□ -0.18
COL5A1-203ENST00000460264 RABAC1Q9UI14 185 aa13.93□□□□□ -0.18
COL5A1-203ENST00000460264 U3KQE9 123 aa13.93□□□□□ -0.18
COL5A1-203ENST00000460264 SACSQ9NZJ4 4579 aa13.92□□□□□ -0.18
COL5A1-203ENST00000460264 PITX3O75364 302 aa13.92□□□□□ -0.18
COL5A1-203ENST00000460264 DEFB131AP59861 70 aa13.92□□□□□ -0.18
COL5A1-203ENST00000460264 PPP1R1AQ13522 171 aa13.92□□□□□ -0.18
COL5A1-203ENST00000460264 RBMS2Q15434 407 aaKnown RBP13.92□□□□□ -0.18
COL5A1-203ENST00000460264 STXBP6Q8NFX7 210 aa13.92□□□□□ -0.18
COL5A1-203ENST00000460264 Q8WTZ3 238 aa13.92□□□□□ -0.18
COL5A1-203ENST00000460264 CSTL1Q9H114 145 aa13.92□□□□□ -0.18
COL5A1-203ENST00000460264 MPTX1A8MV57 137 aa13.91□□□□□ -0.18
COL5A1-203ENST00000460264 K7EQG2 157 aa13.91□□□□□ -0.18
COL5A1-203ENST00000460264 IL4P05112 153 aa13.91□□□□□ -0.18
COL5A1-203ENST00000460264 HNRNPCP07910 306 aaKnown RBP eCLIP13.91□□□□□ -0.18
COL5A1-203ENST00000460264 ATP5IP56385 69 aaPredicted RBP13.91□□□□□ -0.18
COL5A1-203ENST00000460264 EWSR1Q01844 656 aaKnown RBP eCLIP13.91□□□□□ -0.18
COL5A1-203ENST00000460264 USF2Q15853 346 aaPredicted RBP13.91□□□□□ -0.18
COL5A1-203ENST00000460264 LEMD1Q68G75 181 aa13.91□□□□□ -0.18
COL5A1-203ENST00000460264 CENPSQ8N2Z9 138 aa13.91□□□□□ -0.18
COL5A1-203ENST00000460264 GRAMD2BQ96HH9 432 aa13.91□□□□□ -0.18
COL5A1-203ENST00000460264 SFT2D2O95562 160 aa13.9□□□□□ -0.18
COL5A1-203ENST00000460264 TOMM40O96008 361 aa13.9□□□□□ -0.18
COL5A1-203ENST00000460264 IFNA4P05014 189 aa13.9□□□□□ -0.18
COL5A1-203ENST00000460264 SLC25A6P12236 298 aa13.9□□□□□ -0.18
COL5A1-203ENST00000460264 DCANP1Q8TF63 244 aa13.9□□□□□ -0.18
COL5A1-203ENST00000460264 GLMPQ8WWB7 406 aa13.9□□□□□ -0.18
COL5A1-203ENST00000460264 AGRNO00468 2067 aa13.9□□□□□ -0.18
COL5A1-203ENST00000460264 RD3LP0DJH9 198 aa13.89□□□□□ -0.19
COL5A1-203ENST00000460264 BAK1Q16611 211 aa13.89□□□□□ -0.19
COL5A1-203ENST00000460264 C16orf54Q6UWD8 224 aa13.89□□□□□ -0.19
COL5A1-203ENST00000460264 TMED3Q9Y3Q3 217 aa13.89□□□□□ -0.19
COL5A1-203ENST00000460264 HELTA6NFD8 242 aa13.88□□□□□ -0.19
COL5A1-203ENST00000460264 FAM90A26D6RGX4 464 aa13.88□□□□□ -0.19
COL5A1-203ENST00000460264 IAPPP10997 89 aa13.88□□□□□ -0.19
COL5A1-203ENST00000460264 PSG1P11464 419 aa13.88□□□□□ -0.19
COL5A1-203ENST00000460264 TRIQKQ629K1 86 aa13.88□□□□□ -0.19
COL5A1-203ENST00000460264 GATAD1Q8WUU5 269 aa13.88□□□□□ -0.19
COL5A1-203ENST00000460264 JTBO76095 146 aa13.87□□□□□ -0.19
COL5A1-203ENST00000460264 ZNF688P0C7X2 276 aa13.87□□□□□ -0.19
COL5A1-203ENST00000460264 ATF4P18848 351 aaPredicted RBP13.87□□□□□ -0.19
COL5A1-203ENST00000460264 GPX4P36969 197 aaPredicted RBP13.87□□□□□ -0.19
COL5A1-203ENST00000460264 INPP1P49441 399 aa13.87□□□□□ -0.19
COL5A1-203ENST00000460264 EIF2B2P49770 351 aaKnown RBP13.87□□□□□ -0.19
COL5A1-203ENST00000460264 UBE2MP61081 183 aaKnown RBP13.87□□□□□ -0.19
COL5A1-203ENST00000460264 PMS2P11Q13670 270 aa13.87□□□□□ -0.19
COL5A1-203ENST00000460264 GAMTQ14353 236 aa13.87□□□□□ -0.19
COL5A1-203ENST00000460264 SLC35E1Q96K37 410 aa13.87□□□□□ -0.19
COL5A1-203ENST00000460264 IGKV1D-37A0A075B6S9 117 aa13.86□□□□□ -0.19
COL5A1-203ENST00000460264 CXorf65A6NEN9 183 aa13.86□□□□□ -0.19
COL5A1-203ENST00000460264 NAP1L6A6NFF2 107 aa13.86□□□□□ -0.19
COL5A1-203ENST00000460264 NDUFB6O95139 128 aa13.86□□□□□ -0.19
COL5A1-203ENST00000460264 CA1P00915 261 aaPredicted RBP13.86□□□□□ -0.19
COL5A1-203ENST00000460264 HOXB5P09067 269 aa13.86□□□□□ -0.19
COL5A1-203ENST00000460264 OR51G1Q8NGK1 321 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms