RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 ITFG2Q969R8 447 aa-0.42□□□□□ -2.48
SNHG3-203ENST00000447507 ROPN1LQ96C74 230 aa-0.42□□□□□ -2.48
SNHG3-203ENST00000447507 PACRGQ96M98 296 aaPredicted RBP-0.42□□□□□ -2.48
SNHG3-203ENST00000447507 CCL19Q99731 98 aa-0.42□□□□□ -2.48
SNHG3-203ENST00000447507 UCK1Q9HA47 277 aa-0.42□□□□□ -2.48
SNHG3-203ENST00000447507 AGPAT3Q9NRZ7 376 aa-0.42□□□□□ -2.48
SNHG3-203ENST00000447507 MED29Q9NX70 200 aa-0.42□□□□□ -2.48
SNHG3-203ENST00000447507 ORMDL1Q9P0S3 153 aa-0.42□□□□□ -2.48
SNHG3-203ENST00000447507 ERGIC3Q9Y282 383 aa-0.42□□□□□ -2.48
SNHG3-203ENST00000447507 C15orf41Q9Y2V0 281 aa-0.42□□□□□ -2.48
SNHG3-203ENST00000447507 MIA2Q96PC5 1412 aa-0.42□□□□□ -2.48
SNHG3-203ENST00000447507 MYO3BQ8WXR4 1341 aa-0.42□□□□□ -2.48
SNHG3-203ENST00000447507 MYO18AQ92614 2054 aaKnown RBP-0.42□□□□□ -2.48
SNHG3-203ENST00000447507 ABCA4P78363 2273 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 CHD3Q12873 2000 aaKnown RBP-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 SBF1O95248 1867 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 BCORL1Q5H9F3 1711 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 CACNA1HO95180 2353 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 ZNF879B4DU55 563 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 DISC1C4P0D8 188 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 TOX3O15405 576 aaPredicted RBP-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 NEMFO60524 1076 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 OR2J2O76002 312 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 TYMSP04818 313 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 CCDC172P0C7W6 258 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 DDTP30046 118 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 CASQ1P31415 396 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 CDC34P49427 236 aaPredicted RBP-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 RPS20P60866 119 aaKnown RBP-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 IFITM2Q01629 132 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 RPL22L1Q6P5R6 122 aaKnown RBP-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 ZNF833PQ6ZTB9 187 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 MRPL30Q8TCC3 161 aaKnown RBP-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 SMIM19Q96E16 107 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 ADAT3Q96EY9 351 aaPredicted RBP-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 MSANTD3Q96H12 275 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 KCTD7Q96MP8 289 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 DHRS9Q9BPW9 319 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 SIKE1Q9BRV8 207 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 LIMD2Q9BT23 127 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 GGACTQ9BVM4 153 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 C6orf62Q9GZU0 229 aaPredicted RBP-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 MAP1LC3AQ9H492 121 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 BCL2L10Q9HD36 194 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 TMEM138Q9NPI0 162 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 OSTCQ9NRP0 149 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 FKBP14Q9NWM8 211 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 IDI2-AS1Q9NZ38 188 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 SLC35A3Q9Y2D2 325 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 POLR1DQ9Y2S0 133 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 UTP11Q9Y3A2 253 aaKnown RBP-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 ABCA2Q9BZC7 2435 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 CSMD3Q7Z407 3707 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 KIF13BQ9NQT8 1826 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 USH2AO75445 5202 aa-0.43□□□□□ -2.48
SNHG3-203ENST00000447507 KNTC1P50748 2209 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 ASXL3Q9C0F0 2248 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 SRRM2Q9UQ35 2752 aaKnown RBP-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 MED1Q15648 1581 aaPredicted RBP-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 DCCP43146 1447 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 IGLV3-32A0A0A0MS00 114 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 LOC100506127A0A0U1RQW1 187 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 DPRXA6NFQ7 191 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 C1orf196B1AJZ1 125 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 F8W1H4 67 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 JMJD7-PLA2G4BH0Y9G9 81 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 H3BRM9 83 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 HPGDSO60760 199 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 OR2B3O76000 313 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 DHFRP00374 187 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 TPM2P07951 284 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 PET100P0DJ07 73 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 RPL12P30050 165 aaKnown RBP-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 MAGEA2P43356 314 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 MARCKSL1P49006 195 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 FXYD6P3P58550 94 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 DEFA3P59666 94 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 ROMO1P60602 79 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 CAV1Q03135 178 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 Q3ZCU0 254 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 SPATA45Q537H7 98 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 AADACL4Q5VUY2 407 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 CST9Q5W186 159 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 SFXN4Q6P4A7 337 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 Q6ZQY7 126 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 SLC51BQ86UW2 128 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 OR13C4Q8NGS5 318 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 OR2T35Q8NGX2 323 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 JOSD2Q8TAC2 188 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 TMEM254Q8TBM7 123 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 C4orf3Q8WVX3 66 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 OR51I1Q9H343 314 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 SLC39A9Q9NUM3 307 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 FBXL12Q9NXK8 326 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 OR52A1Q9UKL2 312 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 PCTPQ9UKL6 214 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 PKIGQ9Y2B9 76 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 CELSR2Q9HCU4 2923 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 MGAMO43451 1857 aa-0.44□□□□□ -2.48
SNHG3-203ENST00000447507 ARHGEF11O15085 1522 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms