RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 LGI3Q8N145 548 aa13.96□□□□□ -0.17
HMGB3P22-201ENST00000442010 GBGT1Q8N5D6 347 aa13.96□□□□□ -0.17
HMGB3P22-201ENST00000442010 IL17DQ8TAD2 202 aa13.96□□□□□ -0.17
HMGB3P22-201ENST00000442010 TRAV2A0A0B4J234 112 aa13.95□□□□□ -0.18
HMGB3P22-201ENST00000442010 SLC25A4P12235 298 aa13.95□□□□□ -0.18
HMGB3P22-201ENST00000442010 ANXA3P12429 323 aa13.95□□□□□ -0.18
HMGB3P22-201ENST00000442010 NPPCP23582 126 aa13.95□□□□□ -0.18
HMGB3P22-201ENST00000442010 NPY1RP25929 384 aa13.95□□□□□ -0.18
HMGB3P22-201ENST00000442010 RND2P52198 227 aa13.95□□□□□ -0.18
HMGB3P22-201ENST00000442010 SRPXP78539 464 aa13.95□□□□□ -0.18
HMGB3P22-201ENST00000442010 DEFB135Q30KP9 77 aa13.95□□□□□ -0.18
HMGB3P22-201ENST00000442010 TMEM128Q5BJH2 165 aa13.95□□□□□ -0.18
HMGB3P22-201ENST00000442010 OR1S2Q8NGQ3 325 aa13.95□□□□□ -0.18
HMGB3P22-201ENST00000442010 MS4A6AQ9H2W1 248 aa13.95□□□□□ -0.18
HMGB3P22-201ENST00000442010 SPRY2O43597 315 aa13.94□□□□□ -0.18
HMGB3P22-201ENST00000442010 PITX3O75364 302 aa13.94□□□□□ -0.18
HMGB3P22-201ENST00000442010 RPL35AP18077 110 aaKnown RBP13.94□□□□□ -0.18
HMGB3P22-201ENST00000442010 YPEL3P61236 119 aaPredicted RBP13.94□□□□□ -0.18
HMGB3P22-201ENST00000442010 PAFAH1B2P68402 229 aa13.94□□□□□ -0.18
HMGB3P22-201ENST00000442010 LRTM2Q8N967 370 aa13.94□□□□□ -0.18
HMGB3P22-201ENST00000442010 RNF183Q96D59 192 aa13.94□□□□□ -0.18
HMGB3P22-201ENST00000442010 METTL26Q96S19 204 aa13.94□□□□□ -0.18
HMGB3P22-201ENST00000442010 SRRQ9GZT4 340 aa13.94□□□□□ -0.18
HMGB3P22-201ENST00000442010 RBKSQ9H477 322 aa13.94□□□□□ -0.18
HMGB3P22-201ENST00000442010 U3KQ87 197 aa13.94□□□□□ -0.18
HMGB3P22-201ENST00000442010 U3KQE9 123 aa13.94□□□□□ -0.18
HMGB3P22-201ENST00000442010 DUXBA0A1W2PPF3 345 aa13.93□□□□□ -0.18
HMGB3P22-201ENST00000442010 A0A1W2PS18 150 aa13.93□□□□□ -0.18
HMGB3P22-201ENST00000442010 SCGB2A1O75556 95 aa13.93□□□□□ -0.18
HMGB3P22-201ENST00000442010 TMED4Q7Z7H5 227 aa13.93□□□□□ -0.18
HMGB3P22-201ENST00000442010 FAM24BQ8N5W8 94 aa13.93□□□□□ -0.18
HMGB3P22-201ENST00000442010 STPG3Q8N7X2 389 aa13.93□□□□□ -0.18
HMGB3P22-201ENST00000442010 DTD1Q8TEA8 209 aa13.93□□□□□ -0.18
HMGB3P22-201ENST00000442010 SLC25A21Q9BQT8 299 aaPredicted RBP13.93□□□□□ -0.18
HMGB3P22-201ENST00000442010 TMEM231Q9H6L2 316 aa13.93□□□□□ -0.18
HMGB3P22-201ENST00000442010 HYDINQ4G0P3 5121 aa13.93□□□□□ -0.18
HMGB3P22-201ENST00000442010 OR10J1P30954 320 aa13.92□□□□□ -0.18
HMGB3P22-201ENST00000442010 RBMS2Q15434 407 aaKnown RBP13.92□□□□□ -0.18
HMGB3P22-201ENST00000442010 ETFRF1Q6IPR1 90 aa13.92□□□□□ -0.18
HMGB3P22-201ENST00000442010 NOXA1Q86UR1 476 aa13.92□□□□□ -0.18
HMGB3P22-201ENST00000442010 IFNA10P01566 189 aa13.91□□□□□ -0.18
HMGB3P22-201ENST00000442010 P2RY1P47900 373 aa13.91□□□□□ -0.18
HMGB3P22-201ENST00000442010 EWSR1Q01844 656 aaKnown RBP eCLIP13.91□□□□□ -0.18
HMGB3P22-201ENST00000442010 NPIPB3Q92617 1050 aa13.91□□□□□ -0.18
HMGB3P22-201ENST00000442010 PIGBOS1A0A0B4J2F0 54 aa13.9□□□□□ -0.18
HMGB3P22-201ENST00000442010 A0A0J9YWU9 116 aa13.9□□□□□ -0.18
HMGB3P22-201ENST00000442010 K7EQG2 157 aa13.9□□□□□ -0.18
HMGB3P22-201ENST00000442010 DNASE2O00115 360 aaPredicted RBP13.9□□□□□ -0.18
HMGB3P22-201ENST00000442010 SFT2D2O95562 160 aa13.9□□□□□ -0.18
HMGB3P22-201ENST00000442010 SLC25A6P12236 298 aa13.9□□□□□ -0.18
HMGB3P22-201ENST00000442010 PPP1R1AQ13522 171 aa13.9□□□□□ -0.18
HMGB3P22-201ENST00000442010 BAK1Q16611 211 aa13.9□□□□□ -0.18
HMGB3P22-201ENST00000442010 SPANXN2Q5MJ10 180 aa13.9□□□□□ -0.18
HMGB3P22-201ENST00000442010 LYG2Q86SG7 212 aa13.9□□□□□ -0.18
HMGB3P22-201ENST00000442010 OR1S1Q8NH92 325 aa13.9□□□□□ -0.18
HMGB3P22-201ENST00000442010 Q8WTZ3 238 aa13.9□□□□□ -0.18
HMGB3P22-201ENST00000442010 CSTL1Q9H114 145 aa13.9□□□□□ -0.18
HMGB3P22-201ENST00000442010 ALMS1Q8TCU4 4167 aa13.9□□□□□ -0.19
HMGB3P22-201ENST00000442010 TOMM40O96008 361 aa13.89□□□□□ -0.19
HMGB3P22-201ENST00000442010 ATP5IP56385 69 aaPredicted RBP13.89□□□□□ -0.19
HMGB3P22-201ENST00000442010 DEFB131AP59861 70 aa13.89□□□□□ -0.19
HMGB3P22-201ENST00000442010 RPL11P62913 178 aaKnown RBP13.89□□□□□ -0.19
HMGB3P22-201ENST00000442010 USF2Q15853 346 aaPredicted RBP13.89□□□□□ -0.19
HMGB3P22-201ENST00000442010 DCANP1Q8TF63 244 aa13.89□□□□□ -0.19
HMGB3P22-201ENST00000442010 SDHCQ99643 169 aaPredicted RBP13.89□□□□□ -0.19
HMGB3P22-201ENST00000442010 MPTX1A8MV57 137 aa13.88□□□□□ -0.19
HMGB3P22-201ENST00000442010 HNRNPCP07910 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
HMGB3P22-201ENST00000442010 VAMP1P23763 118 aa13.88□□□□□ -0.19
HMGB3P22-201ENST00000442010 LEMD1Q68G75 181 aa13.88□□□□□ -0.19
HMGB3P22-201ENST00000442010 C16orf54Q6UWD8 224 aa13.88□□□□□ -0.19
HMGB3P22-201ENST00000442010 GLMPQ8WWB7 406 aa13.88□□□□□ -0.19
HMGB3P22-201ENST00000442010 ACY3Q96HD9 319 aa13.88□□□□□ -0.19
HMGB3P22-201ENST00000442010 GRAMD2BQ96HH9 432 aa13.88□□□□□ -0.19
HMGB3P22-201ENST00000442010 RABAC1Q9UI14 185 aa13.88□□□□□ -0.19
HMGB3P22-201ENST00000442010 IGKV1D-37A0A075B6S9 117 aa13.87□□□□□ -0.19
HMGB3P22-201ENST00000442010 FAM90A26D6RGX4 464 aa13.87□□□□□ -0.19
HMGB3P22-201ENST00000442010 IL4P05112 153 aa13.87□□□□□ -0.19
HMGB3P22-201ENST00000442010 ATF4P18848 351 aaPredicted RBP13.87□□□□□ -0.19
HMGB3P22-201ENST00000442010 GPX4P36969 197 aaPredicted RBP13.87□□□□□ -0.19
HMGB3P22-201ENST00000442010 CENPSQ8N2Z9 138 aa13.87□□□□□ -0.19
HMGB3P22-201ENST00000442010 STXBP6Q8NFX7 210 aa13.87□□□□□ -0.19
HMGB3P22-201ENST00000442010 TMED3Q9Y3Q3 217 aa13.87□□□□□ -0.19
HMGB3P22-201ENST00000442010 RD3LP0DJH9 198 aa13.86□□□□□ -0.19
HMGB3P22-201ENST00000442010 PSG1P11464 419 aa13.86□□□□□ -0.19
HMGB3P22-201ENST00000442010 GAMTQ14353 236 aa13.86□□□□□ -0.19
HMGB3P22-201ENST00000442010 NARS2Q96I59 477 aaKnown RBP13.86□□□□□ -0.19
HMGB3P22-201ENST00000442010 NAP1L6A6NFF2 107 aa13.85□□□□□ -0.19
HMGB3P22-201ENST00000442010 BUB3O43684 328 aa13.85□□□□□ -0.19
HMGB3P22-201ENST00000442010 NDUFB6O95139 128 aa13.85□□□□□ -0.19
HMGB3P22-201ENST00000442010 IFNA4P05014 189 aa13.85□□□□□ -0.19
HMGB3P22-201ENST00000442010 UBE2MP61081 183 aaKnown RBP13.85□□□□□ -0.19
HMGB3P22-201ENST00000442010 GATAD1Q8WUU5 269 aa13.85□□□□□ -0.19
HMGB3P22-201ENST00000442010 HELTA6NFD8 242 aa13.84□□□□□ -0.19
HMGB3P22-201ENST00000442010 IAPPP10997 89 aa13.84□□□□□ -0.19
HMGB3P22-201ENST00000442010 BTCP35070 178 aa13.84□□□□□ -0.19
HMGB3P22-201ENST00000442010 GGNBP1Q5YKI7 109 aa13.84□□□□□ -0.19
HMGB3P22-201ENST00000442010 C9orf170A2RU37 121 aa13.83□□□□□ -0.2
HMGB3P22-201ENST00000442010 PRSS46E5RG02 174 aa13.83□□□□□ -0.2
HMGB3P22-201ENST00000442010 HOXB5P09067 269 aa13.83□□□□□ -0.2
HMGB3P22-201ENST00000442010 GIG44P09565 113 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms