RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 Q56UQ5 140 aa16.33■□□□□ 0.2
VPS13B-204ENST00000441350 ZNF343Q6P1L6 599 aa16.33■□□□□ 0.2
VPS13B-204ENST00000441350 TRGV9Q99603 122 aa16.33■□□□□ 0.2
VPS13B-204ENST00000441350 ZFP92A6NM28 416 aa16.32■□□□□ 0.2
VPS13B-204ENST00000441350 AGPAT2O15120 278 aa16.32■□□□□ 0.2
VPS13B-204ENST00000441350 IGKV1-17P01599 117 aa16.32■□□□□ 0.2
VPS13B-204ENST00000441350 OR10J1P30954 320 aa16.32■□□□□ 0.2
VPS13B-204ENST00000441350 UBE2E2Q96LR5 201 aa16.32■□□□□ 0.2
VPS13B-204ENST00000441350 RSG1Q9BU20 258 aa16.32■□□□□ 0.2
VPS13B-204ENST00000441350 GGTLC1Q9BX51 225 aa16.32■□□□□ 0.2
VPS13B-204ENST00000441350 GAR1Q9NY12 217 aaKnown RBP16.32■□□□□ 0.2
VPS13B-204ENST00000441350 TRAV30A0A087WSZ9 112 aa16.31■□□□□ 0.2
VPS13B-204ENST00000441350 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.31■□□□□ 0.2
VPS13B-204ENST00000441350 HAX1O00165 279 aa16.31■□□□□ 0.2
VPS13B-204ENST00000441350 GNG7O60262 68 aa16.31■□□□□ 0.2
VPS13B-204ENST00000441350 IGHV3-11P01762 117 aa16.31■□□□□ 0.2
VPS13B-204ENST00000441350 CLEC3BP05452 202 aa16.31■□□□□ 0.2
VPS13B-204ENST00000441350 CTSGP08311 255 aa16.31■□□□□ 0.2
VPS13B-204ENST00000441350 CAMLGP49069 296 aa16.31■□□□□ 0.2
VPS13B-204ENST00000441350 RAB31Q13636 194 aa16.31■□□□□ 0.2
VPS13B-204ENST00000441350 CLEC19AQ6UXS0 136 aa16.31■□□□□ 0.2
VPS13B-204ENST00000441350 GNPNAT1Q96EK6 184 aaPredicted RBP16.31■□□□□ 0.2
VPS13B-204ENST00000441350 SH3BGRL3Q9H299 93 aa16.31■□□□□ 0.2
VPS13B-204ENST00000441350 SLC45A2Q9UMX9 530 aa16.31■□□□□ 0.2
VPS13B-204ENST00000441350 TIMM9Q9Y5J7 89 aa16.31■□□□□ 0.2
VPS13B-204ENST00000441350 RFNGQ9Y644 331 aa16.31■□□□□ 0.2
VPS13B-204ENST00000441350 TCRBV4S1A1TA0A5B7 111 aa16.3■□□□□ 0.2
VPS13B-204ENST00000441350 OR2T8A6NH00 312 aa16.3■□□□□ 0.2
VPS13B-204ENST00000441350 SPP1P10451 314 aa16.3■□□□□ 0.2
VPS13B-204ENST00000441350 GPR183P32249 361 aa16.3■□□□□ 0.2
VPS13B-204ENST00000441350 PSMG3Q9BT73 122 aaPredicted RBP16.3■□□□□ 0.2
VPS13B-204ENST00000441350 CFDP00746 253 aaPredicted RBP16.3■□□□□ 0.2
VPS13B-204ENST00000441350 ADMP35318 185 aa16.3■□□□□ 0.2
VPS13B-204ENST00000441350 ZNF90Q03938 601 aa16.3■□□□□ 0.2
VPS13B-204ENST00000441350 TIGITQ495A1 244 aa16.3■□□□□ 0.2
VPS13B-204ENST00000441350 CHRDL1Q9BU40 450 aa16.3■□□□□ 0.2
VPS13B-204ENST00000441350 GNB4Q9HAV0 340 aa16.3■□□□□ 0.2
VPS13B-204ENST00000441350 CD28P10747 220 aa16.29■□□□□ 0.2
VPS13B-204ENST00000441350 CDX1P47902 265 aaPredicted RBP16.29■□□□□ 0.2
VPS13B-204ENST00000441350 FOXL1Q12952 345 aa16.29■□□□□ 0.2
VPS13B-204ENST00000441350 TMEM182Q6ZP80 229 aaPredicted RBP16.29■□□□□ 0.2
VPS13B-204ENST00000441350 CYP2G1PQ6ZSU1 146 aa16.29■□□□□ 0.2
VPS13B-204ENST00000441350 ZNF709Q8N972 641 aa16.29■□□□□ 0.2
VPS13B-204ENST00000441350 SLC25A32Q9H2D1 315 aa16.29■□□□□ 0.2
VPS13B-204ENST00000441350 C17orf112F2Z3M2 114 aa16.28■□□□□ 0.2
VPS13B-204ENST00000441350 TGOLN2O43493 480 aa16.28■□□□□ 0.2
VPS13B-204ENST00000441350 TRBV12-3P01733 135 aa16.28■□□□□ 0.2
VPS13B-204ENST00000441350 SEC11BP0C7V7 166 aa16.28■□□□□ 0.2
VPS13B-204ENST00000441350 RPL29P47914 159 aaKnown RBP16.28■□□□□ 0.2
VPS13B-204ENST00000441350 PRR20EP86478 221 aa16.28■□□□□ 0.2
VPS13B-204ENST00000441350 PRR20CP86479 221 aa16.28■□□□□ 0.2
VPS13B-204ENST00000441350 PRR20DP86480 221 aa16.28■□□□□ 0.2
VPS13B-204ENST00000441350 PRR20BP86481 221 aa16.28■□□□□ 0.2
VPS13B-204ENST00000441350 PRR20AP86496 221 aa16.28■□□□□ 0.2
VPS13B-204ENST00000441350 FAM209BQ5JX69 171 aa16.28■□□□□ 0.2
VPS13B-204ENST00000441350 WFDC12Q8WWY7 111 aa16.28■□□□□ 0.2
VPS13B-204ENST00000441350 PHYHIPLQ96FC7 376 aa16.28■□□□□ 0.2
VPS13B-204ENST00000441350 NUPL2O15504 423 aaKnown RBP16.27■□□□□ 0.2
VPS13B-204ENST00000441350 LINC00869P0C866 280 aa16.27■□□□□ 0.2
VPS13B-204ENST00000441350 YPEL3P61236 119 aaPredicted RBP16.27■□□□□ 0.2
VPS13B-204ENST00000441350 SELENOTP62341 195 aa16.27■□□□□ 0.2
VPS13B-204ENST00000441350 ATRQ13535 2644 aa16.27■□□□□ 0.2
VPS13B-204ENST00000441350 KRTAP24-1Q3LI83 254 aa16.27■□□□□ 0.2
VPS13B-204ENST00000441350 SPSB3Q6PJ21 355 aa16.27■□□□□ 0.2
VPS13B-204ENST00000441350 TEX261Q6UWH6 196 aa16.27■□□□□ 0.2
VPS13B-204ENST00000441350 OR2G3Q8NGZ4 309 aa16.27■□□□□ 0.2
VPS13B-204ENST00000441350 TMED6Q8WW62 240 aa16.27■□□□□ 0.2
VPS13B-204ENST00000441350 ZNF414Q96IQ9 312 aa16.27■□□□□ 0.2
VPS13B-204ENST00000441350 SCGB2A1O75556 95 aa16.27■□□□□ 0.19
VPS13B-204ENST00000441350 LGALS1P09382 135 aaKnown RBP16.27■□□□□ 0.19
VPS13B-204ENST00000441350 GATA2P23769 480 aaPredicted RBP16.27■□□□□ 0.19
VPS13B-204ENST00000441350 MIC13Q5XKP0 118 aa16.27■□□□□ 0.19
VPS13B-204ENST00000441350 STPG3Q8N7X2 389 aa16.27■□□□□ 0.19
VPS13B-204ENST00000441350 BPIFCQ8NFQ6 507 aa16.27■□□□□ 0.19
VPS13B-204ENST00000441350 OR5B12Q96R08 314 aa16.27■□□□□ 0.19
VPS13B-204ENST00000441350 KCNIP2Q9NS61 270 aa16.27■□□□□ 0.19
VPS13B-204ENST00000441350 PLA2G2EQ9NZK7 142 aa16.27■□□□□ 0.19
VPS13B-204ENST00000441350 PEF1Q9UBV8 284 aaKnown RBP16.27■□□□□ 0.19
VPS13B-204ENST00000441350 PXMP4Q9Y6I8 212 aa16.27■□□□□ 0.19
VPS13B-204ENST00000441350 ANKRD34BA5PLL1 514 aa16.26■□□□□ 0.19
VPS13B-204ENST00000441350 PPP5D1E7EU14 171 aa16.26■□□□□ 0.19
VPS13B-204ENST00000441350 TOMM40O96008 361 aa16.26■□□□□ 0.19
VPS13B-204ENST00000441350 SERF2P84101 59 aa16.26■□□□□ 0.19
VPS13B-204ENST00000441350 IFITM2Q01629 132 aa16.26■□□□□ 0.19
VPS13B-204ENST00000441350 EIF5AL1Q6IS14 154 aaKnown RBP16.26■□□□□ 0.19
VPS13B-204ENST00000441350 C11orf44Q8N8P7 122 aa16.26■□□□□ 0.19
VPS13B-204ENST00000441350 I3L521 148 aa16.25■□□□□ 0.19
VPS13B-204ENST00000441350 FABP1P07148 127 aa16.25■□□□□ 0.19
VPS13B-204ENST00000441350 RD3LP0DJH9 198 aa16.25■□□□□ 0.19
VPS13B-204ENST00000441350 PSG1P11464 419 aa16.25■□□□□ 0.19
VPS13B-204ENST00000441350 ARL3P36405 182 aa16.25■□□□□ 0.19
VPS13B-204ENST00000441350 KRTAP10-3P60369 221 aa16.25■□□□□ 0.19
VPS13B-204ENST00000441350 CITED2Q99967 270 aaPredicted RBP16.25■□□□□ 0.19
VPS13B-204ENST00000441350 SLC39A9Q9NUM3 307 aa16.25■□□□□ 0.19
VPS13B-204ENST00000441350 B2MP61769 119 aa16.24■□□□□ 0.19
VPS13B-204ENST00000441350 ZNF616Q08AN1 781 aa16.24■□□□□ 0.19
VPS13B-204ENST00000441350 ALKAL2Q6UX46 152 aa16.24■□□□□ 0.19
VPS13B-204ENST00000441350 C18orf65Q6ZTR6 163 aa16.24■□□□□ 0.19
VPS13B-204ENST00000441350 ZNF680Q8NEM1 530 aa16.24■□□□□ 0.19
VPS13B-204ENST00000441350 C4orf3Q8WVX3 66 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 503.9 ms