RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 LCN12Q6JVE5 192 aa12.49□□□□□ -0.41
TSC2-206ENST00000439117 C9orf106Q8NAJ2 232 aa12.49□□□□□ -0.41
TSC2-206ENST00000439117 HEATR5BQ9P2D3 2071 aa12.49□□□□□ -0.41
TSC2-206ENST00000439117 APOBEC3AP31941 199 aaPredicted RBP12.49□□□□□ -0.41
TSC2-206ENST00000439117 SRSF1Q07955 248 aaKnown RBP eCLIP12.49□□□□□ -0.412e-7■■□□□ 12.9
TSC2-206ENST00000439117 GUSBP1Q15486 140 aa12.49□□□□□ -0.41
TSC2-206ENST00000439117 KIR3DL3Q8N743 410 aa12.49□□□□□ -0.41
TSC2-206ENST00000439117 NAA38Q9BRA0 125 aaKnown RBP12.49□□□□□ -0.41
TSC2-206ENST00000439117 SPTBN1Q01082 2364 aaKnown RBP12.49□□□□□ -0.41
TSC2-206ENST00000439117 LINC01549A6NIU2 74 aa12.48□□□□□ -0.41
TSC2-206ENST00000439117 LYPD3O95274 346 aa12.48□□□□□ -0.41
TSC2-206ENST00000439117 REPIN1Q9BWE0 567 aaKnown RBP12.48□□□□□ -0.41
TSC2-206ENST00000439117 SPTAN1Q13813 2472 aaKnown RBP12.48□□□□□ -0.41
TSC2-206ENST00000439117 A0A087X0K7 114 aa12.48□□□□□ -0.41
TSC2-206ENST00000439117 NPSP0C0P6 89 aa12.48□□□□□ -0.41
TSC2-206ENST00000439117 IGHV1-2P23083 117 aa12.48□□□□□ -0.41
TSC2-206ENST00000439117 GATA2P23769 480 aaPredicted RBP12.48□□□□□ -0.41
TSC2-206ENST00000439117 ATP5J2P56134 94 aa12.48□□□□□ -0.41
TSC2-206ENST00000439117 SSBP2P81877 361 aaPredicted RBP12.48□□□□□ -0.41
TSC2-206ENST00000439117 SLC25A48Q6ZT89 311 aaKnown RBP12.48□□□□□ -0.41
TSC2-206ENST00000439117 C1QTNF5Q9BXJ0 243 aa12.48□□□□□ -0.41
TSC2-206ENST00000439117 MUC21A0A0G2JKD1 596 aa12.48□□□□□ -0.41
TSC2-206ENST00000439117 MUC21A0A140T8X8 626 aa12.48□□□□□ -0.41
TSC2-206ENST00000439117 ZNF815PA8K554 130 aa12.48□□□□□ -0.41
TSC2-206ENST00000439117 FABP5P3A8MUU1 101 aa12.48□□□□□ -0.41
TSC2-206ENST00000439117 KIR3DS1Q14943 382 aa12.48□□□□□ -0.41
TSC2-206ENST00000439117 MST1LQ2TV78 715 aa12.48□□□□□ -0.41
TSC2-206ENST00000439117 ORMDL2Q53FV1 153 aa12.48□□□□□ -0.41
TSC2-206ENST00000439117 MUC21Q5SSG8 566 aa12.48□□□□□ -0.41
TSC2-206ENST00000439117 DLX4Q92988 240 aaPredicted RBP12.48□□□□□ -0.41
TSC2-206ENST00000439117 TRAV5A0A0B4J249 113 aa12.47□□□□□ -0.41
TSC2-206ENST00000439117 FAM90A9PA6NNJ1 464 aa12.47□□□□□ -0.41
TSC2-206ENST00000439117 SYS1-DBNDD2H3BUS1 97 aa12.47□□□□□ -0.41
TSC2-206ENST00000439117 SPINK8P0C7L1 97 aa12.47□□□□□ -0.41
TSC2-206ENST00000439117 A0A087WV48 116 aa12.47□□□□□ -0.41
TSC2-206ENST00000439117 PPIAL4CA0A0B4J2A2 164 aa12.47□□□□□ -0.41
TSC2-206ENST00000439117 PPIAL4GP0DN37 164 aa12.47□□□□□ -0.41
TSC2-206ENST00000439117 SPACA3Q8IXA5 215 aa12.47□□□□□ -0.41
TSC2-206ENST00000439117 DYNLRB2Q8TF09 96 aa12.47□□□□□ -0.41
TSC2-206ENST00000439117 TTC28Q96AY4 2481 aa12.47□□□□□ -0.41
TSC2-206ENST00000439117 IGKV1D-8A0A087WSZ0 117 aa12.47□□□□□ -0.41
TSC2-206ENST00000439117 A0A0A6YYD4 124 aa12.47□□□□□ -0.41
TSC2-206ENST00000439117 FAM90A2PQ658T7 463 aa12.47□□□□□ -0.41
TSC2-206ENST00000439117 ACP7Q6ZNF0 438 aa12.47□□□□□ -0.41
TSC2-206ENST00000439117 C11orf68Q9H3H3 251 aaKnown RBP12.47□□□□□ -0.41
TSC2-206ENST00000439117 COL6A6A6NMZ7 2263 aa12.47□□□□□ -0.41
TSC2-206ENST00000439117 PLNP26678 52 aa12.47□□□□□ -0.41
TSC2-206ENST00000439117 Q0VG73 95 aa12.47□□□□□ -0.41
TSC2-206ENST00000439117 SRSF7Q16629 238 aaKnown RBP eCLIP12.47□□□□□ -0.41
TSC2-206ENST00000439117 PIMREGQ9BSJ6 248 aa12.47□□□□□ -0.41
TSC2-206ENST00000439117 MED12Q93074 2177 aa12.46□□□□□ -0.41
TSC2-206ENST00000439117 ARTNQ5T4W7 220 aa12.46□□□□□ -0.41
TSC2-206ENST00000439117 ASCL2Q99929 193 aa12.46□□□□□ -0.41
TSC2-206ENST00000439117 ERG28Q9UKR5 140 aa12.46□□□□□ -0.41
TSC2-206ENST00000439117 IGHV2OR16-5A0A0B4J2B6 119 aa12.46□□□□□ -0.41
TSC2-206ENST00000439117 hDV102S1A0JD36 115 aa12.46□□□□□ -0.41
TSC2-206ENST00000439117 IGHV4-39P01824 125 aa12.46□□□□□ -0.41
TSC2-206ENST00000439117 SRSF6Q13247 344 aaKnown RBP12.46□□□□□ -0.41
TSC2-206ENST00000439117 FAM166AQ6J272 317 aa12.46□□□□□ -0.41
TSC2-206ENST00000439117 YAE1D1Q9NRH1 226 aa12.46□□□□□ -0.41
TSC2-206ENST00000439117 IGKV3D-15A0A087WSY6 115 aa12.46□□□□□ -0.42
TSC2-206ENST00000439117 A0A1B0GWJ7 208 aa12.46□□□□□ -0.42
TSC2-206ENST00000439117 IGKV3-15P01624 115 aa12.46□□□□□ -0.42
TSC2-206ENST00000439117 OR9G9P0C7N8 305 aa12.46□□□□□ -0.42
TSC2-206ENST00000439117 DOCK8Q8NF50 2099 aa12.46□□□□□ -0.42
TSC2-206ENST00000439117 C15orf61A6NNL5 157 aa12.45□□□□□ -0.42
TSC2-206ENST00000439117 TM4SF5O14894 197 aa12.45□□□□□ -0.42
TSC2-206ENST00000439117 CD33P20138 364 aa12.45□□□□□ -0.42
TSC2-206ENST00000439117 ROS1P08922 2347 aa12.45□□□□□ -0.42
TSC2-206ENST00000439117 ATXN8Q156A1 80 aa12.45□□□□□ -0.42
TSC2-206ENST00000439117 C10orf91Q5T1B1 145 aa12.45□□□□□ -0.42
TSC2-206ENST00000439117 OR13A1Q8NGR1 328 aa12.45□□□□□ -0.42
TSC2-206ENST00000439117 PINLYPA6NC86 204 aa12.45□□□□□ -0.42
TSC2-206ENST00000439117 GNG5P63218 68 aa12.45□□□□□ -0.42
TSC2-206ENST00000439117 RPRMLQ8N4K4 120 aa12.45□□□□□ -0.42
TSC2-206ENST00000439117 CLEC7AQ9BXN2 247 aa12.45□□□□□ -0.42
TSC2-206ENST00000439117 NMSQ5H8A3 153 aa12.45□□□□□ -0.42
TSC2-206ENST00000439117 AKAP6Q13023 2319 aa12.45□□□□□ -0.42
TSC2-206ENST00000439117 COL4A6Q14031 1691 aa12.44□□□□□ -0.42
TSC2-206ENST00000439117 C9JQL5 133 aa12.44□□□□□ -0.42
TSC2-206ENST00000439117 CEACAM4O75871 244 aa12.44□□□□□ -0.42
TSC2-206ENST00000439117 TDGF1P13385 188 aa12.44□□□□□ -0.42
TSC2-206ENST00000439117 PDLIM4P50479 330 aa12.44□□□□□ -0.42
TSC2-206ENST00000439117 PSG7Q13046 419 aa12.44□□□□□ -0.42
TSC2-206ENST00000439117 CHTOPQ9Y3Y2 248 aaKnown RBP12.44□□□□□ -0.42
TSC2-206ENST00000439117 TCF20Q9UGU0 1960 aaKnown RBP12.44□□□□□ -0.42
TSC2-206ENST00000439117 UPK2O00526 184 aa12.44□□□□□ -0.42
TSC2-206ENST00000439117 BSPH1Q075Z2 132 aa12.44□□□□□ -0.42
TSC2-206ENST00000439117 GGTLC1Q9BX51 225 aa12.44□□□□□ -0.42
TSC2-206ENST00000439117 LOC105371242A0A075B767 164 aa12.44□□□□□ -0.42
TSC2-206ENST00000439117 TRBV7-9A0A0J9YWB2 115 aa12.44□□□□□ -0.42
TSC2-206ENST00000439117 NPFFO15130 113 aa12.44□□□□□ -0.42
TSC2-206ENST00000439117 PFN1P07737 140 aaKnown RBP12.44□□□□□ -0.42
TSC2-206ENST00000439117 CD69Q07108 199 aa12.44□□□□□ -0.42
TSC2-206ENST00000439117 PSG3Q16557 428 aa12.44□□□□□ -0.42
TSC2-206ENST00000439117 FAM106AQ4KMX7 169 aa12.44□□□□□ -0.42
TSC2-206ENST00000439117 KLF17Q5JT82 389 aaPredicted RBP12.44□□□□□ -0.42
TSC2-206ENST00000439117 ADAMTSL5Q6ZMM2 481 aa12.44□□□□□ -0.42
TSC2-206ENST00000439117 PLXNA3P51805 1871 aa12.43□□□□□ -0.42
TSC2-206ENST00000439117 TRAV8-1A0A0A6YYK1 113 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 290.2 ms