RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 GNB1LQ9BYB4 327 aa8.55□□□□□ -1.04
SCAF4-203ENST00000434667 TMEM191AQ9H0A3 160 aa8.55□□□□□ -1.04
SCAF4-203ENST00000434667 PGPA6NDG6 321 aa8.55□□□□□ -1.04
SCAF4-203ENST00000434667 SP1P08047 785 aa8.55□□□□□ -1.04
SCAF4-203ENST00000434667 ESDP10768 282 aa8.55□□□□□ -1.04
SCAF4-203ENST00000434667 WDR73Q6P4I2 378 aa8.55□□□□□ -1.04
SCAF4-203ENST00000434667 HES4Q9HCC6 221 aa8.55□□□□□ -1.04
SCAF4-203ENST00000434667 COX11Q9Y6N1 276 aa8.55□□□□□ -1.04
SCAF4-203ENST00000434667 LRBAP50851 2863 aa8.54□□□□□ -1.04
SCAF4-203ENST00000434667 DSCAMO60469 2012 aa8.54□□□□□ -1.04
SCAF4-203ENST00000434667 TRGV10A0A0A0MS01 117 aa8.54□□□□□ -1.04
SCAF4-203ENST00000434667 ISLRO14498 428 aa8.54□□□□□ -1.04
SCAF4-203ENST00000434667 RBP4P02753 201 aa8.54□□□□□ -1.04
SCAF4-203ENST00000434667 PRDX2P32119 198 aa8.54□□□□□ -1.04
SCAF4-203ENST00000434667 MSMPQ1L6U9 139 aa8.54□□□□□ -1.04
SCAF4-203ENST00000434667 SAPCD1Q5SSQ6 148 aa8.54□□□□□ -1.04
SCAF4-203ENST00000434667 SRRM4A7MD48 611 aaKnown RBP8.54□□□□□ -1.04
SCAF4-203ENST00000434667 E7EUB6 86 aa8.54□□□□□ -1.04
SCAF4-203ENST00000434667 CYC1P08574 325 aa8.54□□□□□ -1.04
SCAF4-203ENST00000434667 C10orf55Q5SWW7 151 aa8.54□□□□□ -1.04
SCAF4-203ENST00000434667 RUSC1-AS1Q66K80 236 aa8.54□□□□□ -1.04
SCAF4-203ENST00000434667 PRNTQ86SH4 94 aa8.54□□□□□ -1.04
SCAF4-203ENST00000434667 SIT1Q9Y3P8 196 aa8.54□□□□□ -1.04
SCAF4-203ENST00000434667 IGKV1D-17A0A075B6S4 117 aa8.54□□□□□ -1.04
SCAF4-203ENST00000434667 LNP1A1A4G5 178 aa8.54□□□□□ -1.04
SCAF4-203ENST00000434667 FAM181BA6NEQ2 426 aa8.54□□□□□ -1.04
SCAF4-203ENST00000434667 MOSP00540 346 aa8.54□□□□□ -1.04
SCAF4-203ENST00000434667 PRSS1P07477 247 aa8.54□□□□□ -1.04
SCAF4-203ENST00000434667 UBE2V1Q13404 147 aa8.54□□□□□ -1.04
SCAF4-203ENST00000434667 NUDT11Q96G61 164 aa8.54□□□□□ -1.04
SCAF4-203ENST00000434667 PILRBQ9UKJ0 227 aa8.54□□□□□ -1.04
SCAF4-203ENST00000434667 MYO9AB2RTY4 2548 aa8.54□□□□□ -1.04
SCAF4-203ENST00000434667 hADV38S2A0JD32 116 aa8.53□□□□□ -1.04
SCAF4-203ENST00000434667 KLK10O43240 276 aa8.53□□□□□ -1.04
SCAF4-203ENST00000434667 TGFAP01135 160 aa8.53□□□□□ -1.04
SCAF4-203ENST00000434667 AMY1AP04745 511 aa8.53□□□□□ -1.04
SCAF4-203ENST00000434667 LYZP61626 148 aa8.53□□□□□ -1.04
SCAF4-203ENST00000434667 DHRS13Q6UX07 377 aa8.53□□□□□ -1.04
SCAF4-203ENST00000434667 C6orf15Q6UXA7 325 aaPredicted RBP8.53□□□□□ -1.04
SCAF4-203ENST00000434667 IFI27L2Q9H2X8 130 aa8.53□□□□□ -1.04
SCAF4-203ENST00000434667 SAA2-SAA4A0A096LPE2 208 aa8.53□□□□□ -1.04
SCAF4-203ENST00000434667 A0A1W2PNU3 283 aaPredicted RBP8.53□□□□□ -1.04
SCAF4-203ENST00000434667 M0R1B8 84 aa8.53□□□□□ -1.04
SCAF4-203ENST00000434667 ZNF207O43670 478 aaKnown RBP8.53□□□□□ -1.04
SCAF4-203ENST00000434667 FAM87AP0C7U9 286 aa8.53□□□□□ -1.04
SCAF4-203ENST00000434667 SAA2P0DJI9 122 aaPredicted RBP8.53□□□□□ -1.04
SCAF4-203ENST00000434667 KLF3P57682 345 aaPredicted RBP8.53□□□□□ -1.04
SCAF4-203ENST00000434667 Q8IYB0 196 aa8.53□□□□□ -1.04
SCAF4-203ENST00000434667 NUP35Q8NFH5 326 aa8.53□□□□□ -1.04
SCAF4-203ENST00000434667 OR4F17Q8NGA8 305 aa8.53□□□□□ -1.04
SCAF4-203ENST00000434667 MAP1LC3CQ9BXW4 147 aa8.53□□□□□ -1.04
SCAF4-203ENST00000434667 AMMECR1Q9Y4X0 333 aaPredicted RBP8.53□□□□□ -1.04
SCAF4-203ENST00000434667 HIGD1CA8MV81 97 aa8.53□□□□□ -1.04
SCAF4-203ENST00000434667 CNIH1O95406 144 aa8.53□□□□□ -1.04
SCAF4-203ENST00000434667 P01737 135 aa8.53□□□□□ -1.04
SCAF4-203ENST00000434667 CT45A1Q5HYN5 189 aa8.53□□□□□ -1.04
SCAF4-203ENST00000434667 MOGAT3Q86VF5 341 aa8.53□□□□□ -1.04
SCAF4-203ENST00000434667 ZBTB34Q8NCN2 500 aa8.53□□□□□ -1.04
SCAF4-203ENST00000434667 CT45A3Q8NHU0 189 aa8.53□□□□□ -1.04
SCAF4-203ENST00000434667 URB1-AS1Q96HZ7 61 aa8.53□□□□□ -1.04
SCAF4-203ENST00000434667 TNFRSF19Q9NS68 423 aa8.53□□□□□ -1.04
SCAF4-203ENST00000434667 PTPRQQ9UMZ3 2332 aa8.52□□□□□ -1.04
SCAF4-203ENST00000434667 NTN3O00634 580 aaPredicted RBP8.52□□□□□ -1.04
SCAF4-203ENST00000434667 RTL8BQ17RB0 113 aa8.52□□□□□ -1.04
SCAF4-203ENST00000434667 NRN1LQ496H8 165 aa8.52□□□□□ -1.04
SCAF4-203ENST00000434667 LINC00322Q6ZN03 302 aaPredicted RBP8.52□□□□□ -1.04
SCAF4-203ENST00000434667 LCNL1Q6ZST4 164 aa8.52□□□□□ -1.04
SCAF4-203ENST00000434667 OR10X1Q8NGY0 326 aa8.52□□□□□ -1.04
SCAF4-203ENST00000434667 GTSF1LQ9H1H1 148 aa8.52□□□□□ -1.04
SCAF4-203ENST00000434667 RALYQ9UKM9 306 aaKnown RBP8.52□□□□□ -1.04
SCAF4-203ENST00000434667 MAP1AP78559 2803 aaPredicted RBP8.52□□□□□ -1.05
SCAF4-203ENST00000434667 ERHP84090 104 aaKnown RBP8.52□□□□□ -1.05
SCAF4-203ENST00000434667 TMEM177Q53S58 311 aa8.52□□□□□ -1.05
SCAF4-203ENST00000434667 BHLHA15Q7RTS1 189 aaPredicted RBP8.52□□□□□ -1.05
SCAF4-203ENST00000434667 ZNF430Q9H8G1 570 aaPredicted RBP8.52□□□□□ -1.05
SCAF4-203ENST00000434667 OR51B2Q9Y5P1 312 aa8.52□□□□□ -1.05
SCAF4-203ENST00000434667 DLX1P56177 255 aa8.52□□□□□ -1.05
SCAF4-203ENST00000434667 PRR20EP86478 221 aa8.52□□□□□ -1.05
SCAF4-203ENST00000434667 PRR20CP86479 221 aa8.52□□□□□ -1.05
SCAF4-203ENST00000434667 PRR20DP86480 221 aa8.52□□□□□ -1.05
SCAF4-203ENST00000434667 PRR20BP86481 221 aa8.52□□□□□ -1.05
SCAF4-203ENST00000434667 PRR20AP86496 221 aa8.52□□□□□ -1.05
SCAF4-203ENST00000434667 HES1Q14469 280 aa8.52□□□□□ -1.05
SCAF4-203ENST00000434667 NUDT10Q8NFP7 164 aa8.52□□□□□ -1.05
SCAF4-203ENST00000434667 NPIPB3Q92617 1050 aa8.52□□□□□ -1.05
SCAF4-203ENST00000434667 IDI2-AS1Q9NZ38 188 aa8.52□□□□□ -1.05
SCAF4-203ENST00000434667 C9orf172C9J069 976 aa8.51□□□□□ -1.05
SCAF4-203ENST00000434667 SRSF6Q13247 344 aaKnown RBP8.51□□□□□ -1.05
SCAF4-203ENST00000434667 SMIM21Q3B7S5 101 aa8.51□□□□□ -1.05
SCAF4-203ENST00000434667 ZCCHC24Q8N2G6 241 aaKnown RBP8.51□□□□□ -1.05
SCAF4-203ENST00000434667 TMEM70Q9BUB7 260 aa8.51□□□□□ -1.05
SCAF4-203ENST00000434667 THYN1Q9P016 225 aa8.51□□□□□ -1.05
SCAF4-203ENST00000434667 MRPL36Q9P0J6 103 aaKnown RBP8.51□□□□□ -1.05
SCAF4-203ENST00000434667 IGHV2OR16-5A0A0B4J2B6 119 aa8.51□□□□□ -1.05
SCAF4-203ENST00000434667 K7EMI3 77 aa8.51□□□□□ -1.05
SCAF4-203ENST00000434667 AREGP15514 252 aa8.51□□□□□ -1.05
SCAF4-203ENST00000434667 SSPNQ14714 243 aa8.51□□□□□ -1.05
SCAF4-203ENST00000434667 C1orf185Q5T7R7 199 aa8.51□□□□□ -1.05
SCAF4-203ENST00000434667 CGB1A6NKQ9 187 aa8.51□□□□□ -1.05
SCAF4-203ENST00000434667 C9JCJ5 164 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms