RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 OXA1LQ15070 435 aa16.92■□□□□ 0.3
HOMER3-203ENST00000433218 C2orf50Q96LR7 162 aa16.92■□□□□ 0.3
HOMER3-203ENST00000433218 CIB3Q96Q77 187 aaPredicted RBP16.92■□□□□ 0.3
HOMER3-203ENST00000433218 CORTO00230 105 aa16.91■□□□□ 0.3
HOMER3-203ENST00000433218 IFNA10P01566 189 aa16.91■□□□□ 0.3
HOMER3-203ENST00000433218 NPY1RP25929 384 aa16.91■□□□□ 0.3
HOMER3-203ENST00000433218 FAM106AQ4KMX7 169 aa16.91■□□□□ 0.3
HOMER3-203ENST00000433218 NOXA1Q86UR1 476 aa16.91■□□□□ 0.3
HOMER3-203ENST00000433218 PINX1Q96BK5 328 aaKnown RBP16.91■□□□□ 0.3
HOMER3-203ENST00000433218 CHRDL1Q9BU40 450 aa16.91■□□□□ 0.3
HOMER3-203ENST00000433218 TGOLN2O43493 480 aa16.9■□□□□ 0.3
HOMER3-203ENST00000433218 C8orf88P0DMB2 117 aa16.9■□□□□ 0.3
HOMER3-203ENST00000433218 ID3Q02535 119 aa16.9■□□□□ 0.3
HOMER3-203ENST00000433218 VN1R17PQ8TDU5 208 aa16.9■□□□□ 0.3
HOMER3-203ENST00000433218 TMEM190Q8WZ59 177 aa16.9■□□□□ 0.3
HOMER3-203ENST00000433218 ZNF436Q9C0F3 470 aaPredicted RBP16.9■□□□□ 0.3
HOMER3-203ENST00000433218 UBQLN2Q9UHD9 624 aa16.9■□□□□ 0.3
HOMER3-203ENST00000433218 SSSCA1O60232 199 aa16.89■□□□□ 0.29
HOMER3-203ENST00000433218 POLR2GP62487 172 aaKnown RBP eCLIP16.89■□□□□ 0.29
HOMER3-203ENST00000433218 BSXQ3C1V8 233 aa16.89■□□□□ 0.29
HOMER3-203ENST00000433218 MGAT4CQ9UBM8 478 aa16.89■□□□□ 0.29
HOMER3-203ENST00000433218 U3KQ87 197 aa16.89■□□□□ 0.29
HOMER3-203ENST00000433218 ZNF207O43670 478 aaKnown RBP16.88■□□□□ 0.29
HOMER3-203ENST00000433218 ADMP35318 185 aa16.88■□□□□ 0.29
HOMER3-203ENST00000433218 RPP30P78346 268 aaKnown RBP16.88■□□□□ 0.29
HOMER3-203ENST00000433218 EWSR1Q01844 656 aaKnown RBP eCLIP16.88■□□□□ 0.29
HOMER3-203ENST00000433218 C2orf83Q53S99 150 aa16.88■□□□□ 0.29
HOMER3-203ENST00000433218 SLC16A13Q7RTY0 426 aa16.88■□□□□ 0.29
HOMER3-203ENST00000433218 K7EIM0 57 aa16.87■□□□□ 0.29
HOMER3-203ENST00000433218 SIX6O95475 246 aa16.87■□□□□ 0.29
HOMER3-203ENST00000433218 MT-CO2P00403 227 aa16.87■□□□□ 0.29
HOMER3-203ENST00000433218 OVOL2Q9BRP0 275 aa16.87■□□□□ 0.29
HOMER3-203ENST00000433218 C21orf62Q9NYP8 219 aa16.87■□□□□ 0.29
HOMER3-203ENST00000433218 PAIP2BQ9ULR5 123 aaKnown RBP16.87■□□□□ 0.29
HOMER3-203ENST00000433218 LSM5Q9Y4Y9 91 aaKnown RBP16.87■□□□□ 0.29
HOMER3-203ENST00000433218 MBPP02686 304 aaPredicted RBP16.87■□□□□ 0.29
HOMER3-203ENST00000433218 OPRK1P41145 380 aa16.87■□□□□ 0.29
HOMER3-203ENST00000433218 S100A10P60903 97 aa16.87■□□□□ 0.29
HOMER3-203ENST00000433218 SCARB1Q8WTV0 552 aa16.87■□□□□ 0.29
HOMER3-203ENST00000433218 MED28Q9H204 178 aa16.87■□□□□ 0.29
HOMER3-203ENST00000433218 RPS10-NUDT3A0A1W2PQS6 291 aa16.86■□□□□ 0.29
HOMER3-203ENST00000433218 I3L2K1 104 aa16.86■□□□□ 0.29
HOMER3-203ENST00000433218 IFNA4P05014 189 aa16.86■□□□□ 0.29
HOMER3-203ENST00000433218 ATP5IP56385 69 aaPredicted RBP16.86■□□□□ 0.29
HOMER3-203ENST00000433218 RAB11AP62491 216 aa16.86■□□□□ 0.29
HOMER3-203ENST00000433218 UBAC2Q8NBM4 344 aa16.86■□□□□ 0.29
HOMER3-203ENST00000433218 GGTLC1Q9BX51 225 aa16.86■□□□□ 0.29
HOMER3-203ENST00000433218 RCL1Q9Y2P8 373 aaKnown RBP16.86■□□□□ 0.29
HOMER3-203ENST00000433218 H3BP45 60 aa16.85■□□□□ 0.29
HOMER3-203ENST00000433218 L7N2F9 121 aa16.85■□□□□ 0.29
HOMER3-203ENST00000433218 VAMP2P63027 116 aa16.85■□□□□ 0.29
HOMER3-203ENST00000433218 CYCSP99999 105 aaKnown RBP16.85■□□□□ 0.29
HOMER3-203ENST00000433218 ODF3L2Q3SX64 289 aa16.85■□□□□ 0.29
HOMER3-203ENST00000433218 Q56UQ5 140 aa16.85■□□□□ 0.29
HOMER3-203ENST00000433218 SPANXN5Q5MJ07 72 aa16.85■□□□□ 0.29
HOMER3-203ENST00000433218 PVRIGQ6DKI7 326 aa16.85■□□□□ 0.29
HOMER3-203ENST00000433218 RNASEH2CQ8TDP1 164 aaKnown RBP16.85■□□□□ 0.29
HOMER3-203ENST00000433218 RAB40CQ96S21 281 aa16.85■□□□□ 0.29
HOMER3-203ENST00000433218 PSENENQ9NZ42 101 aa16.85■□□□□ 0.29
HOMER3-203ENST00000433218 STRAPQ9Y3F4 350 aaKnown RBP16.85■□□□□ 0.29
HOMER3-203ENST00000433218 IGHV3-48P01763 117 aa16.84■□□□□ 0.29
HOMER3-203ENST00000433218 MFAP4P55083 255 aa16.84■□□□□ 0.29
HOMER3-203ENST00000433218 NMES1Q9C002 83 aa16.84■□□□□ 0.29
HOMER3-203ENST00000433218 MRPL27Q9P0M9 148 aaKnown RBP16.84■□□□□ 0.29
HOMER3-203ENST00000433218 UFC1Q9Y3C8 167 aa16.84■□□□□ 0.29
HOMER3-203ENST00000433218 K7EPK0 472 aa16.83■□□□□ 0.28
HOMER3-203ENST00000433218 PVALBP20472 110 aaPredicted RBP16.83■□□□□ 0.28
HOMER3-203ENST00000433218 TMEM170AQ8WVE7 144 aa16.83■□□□□ 0.28
HOMER3-203ENST00000433218 BSCL2Q96G97 398 aaPredicted RBP16.83■□□□□ 0.28
HOMER3-203ENST00000433218 C20orf24Q9BUV8 137 aa16.83■□□□□ 0.28
HOMER3-203ENST00000433218 LOC102724200A0A096LPH7 203 aaPredicted RBP16.82■□□□□ 0.28
HOMER3-203ENST00000433218 C15orf62A8K5M9 175 aa16.82■□□□□ 0.28
HOMER3-203ENST00000433218 H2BFSP57053 126 aa16.82■□□□□ 0.28
HOMER3-203ENST00000433218 RAB32Q13637 225 aa16.82■□□□□ 0.28
HOMER3-203ENST00000433218 ZNF124Q15973 351 aa16.82■□□□□ 0.28
HOMER3-203ENST00000433218 ETFRF1Q6IPR1 90 aa16.82■□□□□ 0.28
HOMER3-203ENST00000433218 RBPMS2Q6ZRY4 209 aaKnown RBP16.82■□□□□ 0.28
HOMER3-203ENST00000433218 MARC2Q969Z3 335 aa16.82■□□□□ 0.28
HOMER3-203ENST00000433218 SMIM8Q96KF7 97 aa16.82■□□□□ 0.28
HOMER3-203ENST00000433218 ATP6V0BQ99437 205 aa16.82■□□□□ 0.28
HOMER3-203ENST00000433218 DAZ1Q9NQZ3 744 aaKnown RBP16.82■□□□□ 0.28
HOMER3-203ENST00000433218 IGHV3-49A0A0A0MS15 119 aa16.81■□□□□ 0.28
HOMER3-203ENST00000433218 GNG7O60262 68 aa16.81■□□□□ 0.28
HOMER3-203ENST00000433218 ELLP55199 621 aaPredicted RBP16.81■□□□□ 0.28
HOMER3-203ENST00000433218 TAS2R30P59541 319 aa16.81■□□□□ 0.28
HOMER3-203ENST00000433218 DEFB135Q30KP9 77 aa16.81■□□□□ 0.28
HOMER3-203ENST00000433218 TXN2Q99757 166 aa16.81■□□□□ 0.28
HOMER3-203ENST00000433218 AGRNO00468 2067 aa16.81■□□□□ 0.28
HOMER3-203ENST00000433218 TRAV25A0A0B4J276 109 aa16.8■□□□□ 0.28
HOMER3-203ENST00000433218 NPBWR1P48145 328 aa16.8■□□□□ 0.28
HOMER3-203ENST00000433218 IL15RAQ13261 267 aa16.8■□□□□ 0.28
HOMER3-203ENST00000433218 FCN2Q15485 313 aa16.8■□□□□ 0.28
HOMER3-203ENST00000433218 LRRC37A5PQ49AS3 106 aa16.8■□□□□ 0.28
HOMER3-203ENST00000433218 FNDC4Q9H6D8 234 aaPredicted RBP16.8■□□□□ 0.28
HOMER3-203ENST00000433218 NDUFA4O00483 81 aa16.79■□□□□ 0.28
HOMER3-203ENST00000433218 TSPAN4O14817 238 aa16.79■□□□□ 0.28
HOMER3-203ENST00000433218 TSC22D2O75157 780 aa16.79■□□□□ 0.28
HOMER3-203ENST00000433218 SCGB2A1O75556 95 aa16.79■□□□□ 0.28
HOMER3-203ENST00000433218 RLN2P04090 185 aa16.79■□□□□ 0.28
HOMER3-203ENST00000433218 SLC25A4P12235 298 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms