RNA–Protein interactions for RNA: ENST00000423048.5

ALMS1-201, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 1 (best)

Gene ALMS1, Length 5,194 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-201ENST00000423048 CD5LO43866 347 aa5.87□□□□□ -1.47
ALMS1-201ENST00000423048 IGHV1-8P0DP01 117 aa5.87□□□□□ -1.47
ALMS1-201ENST00000423048 WNT5AP41221 380 aa5.87□□□□□ -1.47
ALMS1-201ENST00000423048 C9orf106Q8NAJ2 232 aa5.87□□□□□ -1.47
ALMS1-201ENST00000423048 FDCSPQ8NFU4 85 aa5.87□□□□□ -1.47
ALMS1-201ENST00000423048 PGLYRP4Q96LB8 373 aa5.87□□□□□ -1.47
ALMS1-201ENST00000423048 SHANK2-AS3Q9BTD1 123 aa5.87□□□□□ -1.47
ALMS1-201ENST00000423048 TRBV20OR9-2A0A075B6H5 130 aa5.87□□□□□ -1.47
ALMS1-201ENST00000423048 TRBV20-1A0A075B6N2 111 aa5.87□□□□□ -1.47
ALMS1-201ENST00000423048 PRSS46E5RG02 174 aa5.87□□□□□ -1.47
ALMS1-201ENST00000423048 H0Y8G0 127 aa5.87□□□□□ -1.47
ALMS1-201ENST00000423048 H0YJW9 148 aa5.87□□□□□ -1.47
ALMS1-201ENST00000423048 NUDT11Q96G61 164 aa5.87□□□□□ -1.47
ALMS1-201ENST00000423048 C1orf147Q96MC9 270 aaPredicted RBP5.87□□□□□ -1.47
ALMS1-201ENST00000423048 TIAF1O95411 115 aa5.87□□□□□ -1.47
ALMS1-201ENST00000423048 TCRAP04437 139 aa5.87□□□□□ -1.47
ALMS1-201ENST00000423048 IFI27P40305 119 aaPredicted RBP5.87□□□□□ -1.47
ALMS1-201ENST00000423048 KLF5Q13887 457 aaPredicted RBP5.87□□□□□ -1.47
ALMS1-201ENST00000423048 TNFRSF18Q9Y5U5 241 aa5.87□□□□□ -1.47
ALMS1-201ENST00000423048 LILRA1O75019 489 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 MGPP08493 103 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 PCM1Q15154 2024 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 IGKV1-12A0A0C4DH73 117 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 PRR32B1ATL7 298 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 HAX1O00165 279 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 OR2J3O76001 311 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 IGKV1D-12P01611 117 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 ZNF138P52744 262 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 CCL8P80075 99 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 FOXF2Q12947 444 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 ECSCRQ19T08 205 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 CCL19Q99731 98 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 HIST1H2BLQ99880 126 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 CHAC1Q9BUX1 264 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 WNT10AQ9GZT5 417 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 DPH3P1Q9H4G8 78 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 CCDC88CQ9P219 2028 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 IGKV1D-13A0A0B4J2D9 117 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 SCO2A0A1W2PP80 73 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 VCYO14598 125 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 TCF21O43680 179 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 CGAP01215 116 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 RFPL3SP0C7P2 107 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 IGKV1-13P0DP09 117 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 PF4V1P10720 104 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 MYF5P13349 255 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 PSG3Q16557 428 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 CR1LQ2VPA4 569 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 ALKBH6Q3KRA9 238 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 SCGB3A1Q96QR1 104 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 PGPEP1LA6NFU8 196 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 ATXN7O15265 892 aaPredicted RBP5.86□□□□□ -1.47
ALMS1-201ENST00000423048 NKX2-8O15522 239 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 APOHP02749 345 aaPredicted RBP5.86□□□□□ -1.47
ALMS1-201ENST00000423048 TFF3Q07654 80 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 ADIPOQQ15848 244 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 BATF2Q8N1L9 274 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 FAM168AQ92567 244 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 PRR13Q9NZ81 148 aa5.86□□□□□ -1.47
ALMS1-201ENST00000423048 EFNA2O43921 213 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 CEACAM4O75871 244 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 IGKV1-5P01602 117 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 TRGV3P03979 118 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 HINT1P49773 126 aaPredicted RBP5.85□□□□□ -1.47
ALMS1-201ENST00000423048 LAGE3Q14657 143 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 ZNF562Q6V9R5 426 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 GAFA1Q96PS6 74 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 C20orf78Q9BR46 151 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 WFDC1Q9HC57 220 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 C15orf62A8K5M9 175 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 RNASE2P10153 161 aaKnown RBP5.85□□□□□ -1.47
ALMS1-201ENST00000423048 C5orf64Q2M2E5 130 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 FZR1Q9UM11 496 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 IGHV1-69DA0A0B4J2H0 117 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 TEX48A0A1B0GUV7 120 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 HIGD1CA8MV81 97 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 IGKCP01834 107 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 PFN1P07737 140 aaKnown RBP5.85□□□□□ -1.47
ALMS1-201ENST00000423048 SCGB1A1P11684 91 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 VDAC2P45880 294 aaPredicted RBP5.85□□□□□ -1.47
ALMS1-201ENST00000423048 KHDC1LQ5JSQ8 128 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 FAM90A2PQ658T7 463 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 ZNF418Q8TF45 676 aaPredicted RBP5.85□□□□□ -1.47
ALMS1-201ENST00000423048 NEU1Q99519 415 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 IGHV2-26A0A0B4J1V2 119 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 C1QL1O75973 258 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 BSPH1Q075Z2 132 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 LGALS9BQ3B8N2 356 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 LGALS9CQ6DKI2 356 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 ZNF826PQ6ZT77 177 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 Q6ZVH6 145 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 MIR17HGQ75NE6 70 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 RTN4RQ9BZR6 473 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 SEPSECSQ9HD40 501 aaKnown RBP5.85□□□□□ -1.47
ALMS1-201ENST00000423048 RAXQ9Y2V3 346 aa5.85□□□□□ -1.47
ALMS1-201ENST00000423048 IGHV1-24A0A0C4DH33 117 aa5.84□□□□□ -1.47
ALMS1-201ENST00000423048 SPAARA0A1B0GVQ0 90 aa5.84□□□□□ -1.47
ALMS1-201ENST00000423048 CELA2AP08217 269 aa5.84□□□□□ -1.47
ALMS1-201ENST00000423048 HLA-DRB4P13762 266 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms