RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 PRR13Q9NZ81 148 aa18.67■□□□□ 0.58
VEGFA-208ENST00000417285 SHPKQ9UHJ6 478 aa18.67■□□□□ 0.58
VEGFA-208ENST00000417285 PIGBOS1A0A0B4J2F0 54 aa18.66■□□□□ 0.58
VEGFA-208ENST00000417285 NXPH3O95157 252 aa18.66■□□□□ 0.58
VEGFA-208ENST00000417285 APOHP02749 345 aaPredicted RBP18.66■□□□□ 0.58
VEGFA-208ENST00000417285 SLC25A4P12235 298 aa18.66■□□□□ 0.58
VEGFA-208ENST00000417285 CCR6P51684 374 aa18.66■□□□□ 0.58
VEGFA-208ENST00000417285 RPL11P62913 178 aaKnown RBP18.66■□□□□ 0.58
VEGFA-208ENST00000417285 SUPT4H1P63272 117 aaKnown RBP18.66■□□□□ 0.58
VEGFA-208ENST00000417285 NMSQ5H8A3 153 aa18.66■□□□□ 0.58
VEGFA-208ENST00000417285 LGI3Q8N145 548 aa18.66■□□□□ 0.58
VEGFA-208ENST00000417285 TRIM63Q969Q1 353 aa18.66■□□□□ 0.58
VEGFA-208ENST00000417285 MS4A6AQ9H2W1 248 aa18.66■□□□□ 0.58
VEGFA-208ENST00000417285 IGHV3-66A0A0C4DH42 116 aa18.65■□□□□ 0.58
VEGFA-208ENST00000417285 NPY1RP25929 384 aa18.65■□□□□ 0.58
VEGFA-208ENST00000417285 SMCO1Q147U7 214 aa18.65■□□□□ 0.58
VEGFA-208ENST00000417285 ETFRF1Q6IPR1 90 aa18.65■□□□□ 0.58
VEGFA-208ENST00000417285 LILRB2Q8N423 598 aa18.65■□□□□ 0.58
VEGFA-208ENST00000417285 OR1S2Q8NGQ3 325 aa18.65■□□□□ 0.58
VEGFA-208ENST00000417285 NARS2Q96I59 477 aaKnown RBP18.65■□□□□ 0.58
VEGFA-208ENST00000417285 V9GYH0 126 aa18.65■□□□□ 0.58
VEGFA-208ENST00000417285 PLECQ15149 4684 aaKnown RBP18.64■□□□□ 0.58
VEGFA-208ENST00000417285 IGKV1-17P01599 117 aa18.64■□□□□ 0.57
VEGFA-208ENST00000417285 PMS2P11Q13670 270 aa18.64■□□□□ 0.57
VEGFA-208ENST00000417285 TIGITQ495A1 244 aa18.64■□□□□ 0.57
VEGFA-208ENST00000417285 CEMP1Q6PRD7 247 aaPredicted RBP18.64■□□□□ 0.57
VEGFA-208ENST00000417285 LYZL2Q7Z4W2 148 aa18.64■□□□□ 0.57
VEGFA-208ENST00000417285 CRYBB3P26998 211 aa18.63■□□□□ 0.57
VEGFA-208ENST00000417285 RND2P52198 227 aa18.63■□□□□ 0.57
VEGFA-208ENST00000417285 EWSR1Q01844 656 aaKnown RBP eCLIP18.63■□□□□ 0.573e-7■■■□□ 16.8
VEGFA-208ENST00000417285 ZNF124Q15973 351 aa18.63■□□□□ 0.57
VEGFA-208ENST00000417285 PRSS54Q6PEW0 395 aa18.63■□□□□ 0.57
VEGFA-208ENST00000417285 TMED4Q7Z7H5 227 aa18.63■□□□□ 0.57
VEGFA-208ENST00000417285 DEDD2Q8WXF8 326 aa18.63■□□□□ 0.57
VEGFA-208ENST00000417285 HSPB7Q9UBY9 170 aa18.63■□□□□ 0.57
VEGFA-208ENST00000417285 KLK5Q9Y337 293 aaPredicted RBP18.63■□□□□ 0.57
VEGFA-208ENST00000417285 IGLC1P0CG04 106 aa18.62■□□□□ 0.57
VEGFA-208ENST00000417285 DTD1Q8TEA8 209 aa18.62■□□□□ 0.57
VEGFA-208ENST00000417285 RARRES2Q99969 163 aa18.62■□□□□ 0.57
VEGFA-208ENST00000417285 U3KQ87 197 aa18.62■□□□□ 0.57
VEGFA-208ENST00000417285 IFNA10P01566 189 aa18.61■□□□□ 0.57
VEGFA-208ENST00000417285 OR10J1P30954 320 aa18.61■□□□□ 0.57
VEGFA-208ENST00000417285 ZNF79Q15937 498 aa18.61■□□□□ 0.57
VEGFA-208ENST00000417285 TMEM128Q5BJH2 165 aa18.61■□□□□ 0.57
VEGFA-208ENST00000417285 CCDC190Q86UF4 302 aa18.61■□□□□ 0.57
VEGFA-208ENST00000417285 Q8WTZ3 238 aa18.61■□□□□ 0.57
VEGFA-208ENST00000417285 TMEM170AQ8WVE7 144 aa18.61■□□□□ 0.57
VEGFA-208ENST00000417285 GRAMD2BQ96HH9 432 aa18.61■□□□□ 0.57
VEGFA-208ENST00000417285 RBM38Q9H0Z9 239 aaKnown RBP18.61■□□□□ 0.57
VEGFA-208ENST00000417285 DUXBA0A1W2PPF3 345 aa18.6■□□□□ 0.57
VEGFA-208ENST00000417285 ZNF701M0R085 212 aaPredicted RBP18.6■□□□□ 0.57
VEGFA-208ENST00000417285 DEFB131AP59861 70 aa18.6■□□□□ 0.57
VEGFA-208ENST00000417285 YPEL3P61236 119 aaPredicted RBP18.6■□□□□ 0.57
VEGFA-208ENST00000417285 OR1S1Q8NH92 325 aa18.6■□□□□ 0.57
VEGFA-208ENST00000417285 LINC00476Q8WZB0 136 aa18.6■□□□□ 0.57
VEGFA-208ENST00000417285 SLC25A21Q9BQT8 299 aaPredicted RBP18.6■□□□□ 0.57
VEGFA-208ENST00000417285 RBKSQ9H477 322 aa18.6■□□□□ 0.57
VEGFA-208ENST00000417285 RABAC1Q9UI14 185 aa18.6■□□□□ 0.57
VEGFA-208ENST00000417285 P2RY1P47900 373 aa18.59■□□□□ 0.57
VEGFA-208ENST00000417285 EIF2B2P49770 351 aaKnown RBP18.58■□□□□ 0.56
VEGFA-208ENST00000417285 ATP5IP56385 69 aaPredicted RBP18.58■□□□□ 0.56
VEGFA-208ENST00000417285 SPANXN2Q5MJ10 180 aa18.58■□□□□ 0.56
VEGFA-208ENST00000417285 NPIPB3Q92617 1050 aa18.58■□□□□ 0.56
VEGFA-208ENST00000417285 ACY3Q96HD9 319 aa18.58■□□□□ 0.56
VEGFA-208ENST00000417285 VAMP1P23763 118 aa18.57■□□□□ 0.56
VEGFA-208ENST00000417285 STXBP6Q8NFX7 210 aa18.57■□□□□ 0.56
VEGFA-208ENST00000417285 OR11H2Q8NH07 326 aa18.57■□□□□ 0.56
VEGFA-208ENST00000417285 EPPK1P58107 5090 aaKnown RBP18.56■□□□□ 0.56
VEGFA-208ENST00000417285 HNRNPCP07910 306 aaKnown RBP eCLIP18.56■□□□□ 0.56
VEGFA-208ENST00000417285 AP2S1P53680 142 aaPredicted RBP18.56■□□□□ 0.56
VEGFA-208ENST00000417285 LEMD1Q68G75 181 aa18.56■□□□□ 0.56
VEGFA-208ENST00000417285 STHQ8IWL8 128 aa18.56■□□□□ 0.56
VEGFA-208ENST00000417285 U3KQE9 123 aa18.56■□□□□ 0.56
VEGFA-208ENST00000417285 HELTA6NFD8 242 aa18.55■□□□□ 0.56
VEGFA-208ENST00000417285 K7EQG2 157 aa18.55■□□□□ 0.56
VEGFA-208ENST00000417285 LY6G6CO95867 125 aa18.55■□□□□ 0.56
VEGFA-208ENST00000417285 CA1P00915 261 aaPredicted RBP18.55■□□□□ 0.56
VEGFA-208ENST00000417285 IFNA4P05014 189 aa18.55■□□□□ 0.56
VEGFA-208ENST00000417285 RBMS2Q15434 407 aaKnown RBP18.55■□□□□ 0.56
VEGFA-208ENST00000417285 FAM24BQ8N5W8 94 aa18.55■□□□□ 0.56
VEGFA-208ENST00000417285 LRTM2Q8N967 370 aa18.55■□□□□ 0.56
VEGFA-208ENST00000417285 MFFQ9GZY8 342 aa18.55■□□□□ 0.56
VEGFA-208ENST00000417285 C11orf68Q9H3H3 251 aaKnown RBP18.55■□□□□ 0.56
VEGFA-208ENST00000417285 ALMS1Q8TCU4 4167 aa18.55■□□□□ 0.56
VEGFA-208ENST00000417285 HYDINQ4G0P3 5121 aa18.54■□□□□ 0.56
VEGFA-208ENST00000417285 TOMM40O96008 361 aa18.54■□□□□ 0.56
VEGFA-208ENST00000417285 IL4P05112 153 aa18.54■□□□□ 0.56
VEGFA-208ENST00000417285 RD3LP0DJH9 198 aa18.54■□□□□ 0.56
VEGFA-208ENST00000417285 TMEM41BQ5BJD5 291 aa18.54■□□□□ 0.56
VEGFA-208ENST00000417285 PHLDA1Q8WV24 401 aaPredicted RBP18.54■□□□□ 0.56
VEGFA-208ENST00000417285 PITX3O75364 302 aa18.53■□□□□ 0.56
VEGFA-208ENST00000417285 SLC25A6P12236 298 aa18.53■□□□□ 0.56
VEGFA-208ENST00000417285 INPP1P49441 399 aa18.53■□□□□ 0.56
VEGFA-208ENST00000417285 CENPSQ8N2Z9 138 aa18.53■□□□□ 0.56
VEGFA-208ENST00000417285 SRRQ9GZT4 340 aa18.53■□□□□ 0.56
VEGFA-208ENST00000417285 TMED3Q9Y3Q3 217 aa18.53■□□□□ 0.56
VEGFA-208ENST00000417285 SFT2D2O95562 160 aa18.52■□□□□ 0.56
VEGFA-208ENST00000417285 GPX4P36969 197 aaPredicted RBP18.52■□□□□ 0.56
VEGFA-208ENST00000417285 PPP1R1AQ13522 171 aa18.52■□□□□ 0.56
VEGFA-208ENST00000417285 C16orf54Q6UWD8 224 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms