RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 ZFP30Q9Y2G7 519 aa7.92□□□□□ -1.14
CD44-206ENST00000415148 FAM215AQ9Y5M1 114 aa7.92□□□□□ -1.14
CD44-206ENST00000415148 RAI1Q7Z5J4 1906 aaPredicted RBP7.92□□□□□ -1.14
CD44-206ENST00000415148 TCRBV4S1A1TA0A5B7 111 aa7.92□□□□□ -1.14
CD44-206ENST00000415148 COX7A2P2O60397 106 aa7.92□□□□□ -1.14
CD44-206ENST00000415148 IGHV3-48P01763 117 aa7.92□□□□□ -1.14
CD44-206ENST00000415148 CD40P25942 277 aa7.92□□□□□ -1.14
CD44-206ENST00000415148 HINT1P49773 126 aaPredicted RBP7.92□□□□□ -1.14
CD44-206ENST00000415148 DEFB109BQ30KR1 87 aa7.92□□□□□ -1.14
CD44-206ENST00000415148 ERASQ7Z444 233 aa7.92□□□□□ -1.14
CD44-206ENST00000415148 ZNF329Q86UD4 541 aa7.92□□□□□ -1.14
CD44-206ENST00000415148 LINC00311Q8N616 119 aa7.92□□□□□ -1.14
CD44-206ENST00000415148 OR2T6Q8NHC8 308 aa7.92□□□□□ -1.14
CD44-206ENST00000415148 RNASE8Q8TDE3 154 aaKnown RBP7.92□□□□□ -1.14
CD44-206ENST00000415148 TMEM186Q96B77 213 aa7.92□□□□□ -1.14
CD44-206ENST00000415148 SNRNP40Q96DI7 357 aaKnown RBP7.92□□□□□ -1.14
CD44-206ENST00000415148 PAXXQ9BUH6 204 aa7.92□□□□□ -1.14
CD44-206ENST00000415148 MRPL20Q9BYC9 149 aaKnown RBP7.92□□□□□ -1.14
CD44-206ENST00000415148 CSMD1Q96PZ7 3565 aa7.91□□□□□ -1.14
CD44-206ENST00000415148 DPRXA6NFQ7 191 aa7.91□□□□□ -1.14
CD44-206ENST00000415148 VWC2LB2RUY7 222 aa7.91□□□□□ -1.14
CD44-206ENST00000415148 CORTO00230 105 aa7.91□□□□□ -1.14
CD44-206ENST00000415148 CEACAM8P31997 349 aaPredicted RBP7.91□□□□□ -1.14
CD44-206ENST00000415148 KLF5Q13887 457 aaPredicted RBP7.91□□□□□ -1.14
CD44-206ENST00000415148 TNXAQ16473 311 aa7.91□□□□□ -1.14
CD44-206ENST00000415148 TBR1Q16650 682 aa7.91□□□□□ -1.14
CD44-206ENST00000415148 EBLN2Q6P2I7 272 aa7.91□□□□□ -1.14
CD44-206ENST00000415148 C18orf32Q8TCD1 76 aa7.91□□□□□ -1.14
CD44-206ENST00000415148 SSBP4Q9BWG4 385 aaPredicted RBP7.91□□□□□ -1.14
CD44-206ENST00000415148 PPP1R14DQ9NXH3 145 aa7.91□□□□□ -1.14
CD44-206ENST00000415148 LAMTOR2Q9Y2Q5 125 aa7.91□□□□□ -1.14
CD44-206ENST00000415148 SH2D7A6NKC9 451 aaPredicted RBP7.91□□□□□ -1.14
CD44-206ENST00000415148 PEX7O00628 323 aa7.91□□□□□ -1.14
CD44-206ENST00000415148 FTH1P19P0C7X4 201 aa7.91□□□□□ -1.14
CD44-206ENST00000415148 MYCNOSP40205 109 aa7.91□□□□□ -1.14
CD44-206ENST00000415148 PCP4P48539 62 aa7.91□□□□□ -1.14
CD44-206ENST00000415148 KLHDC1Q8N7A1 406 aa7.91□□□□□ -1.14
CD44-206ENST00000415148 RND1Q92730 232 aa7.91□□□□□ -1.14
CD44-206ENST00000415148 BORCS7Q96B45 105 aa7.91□□□□□ -1.14
CD44-206ENST00000415148 SGK494Q96LW2 274 aa7.91□□□□□ -1.14
CD44-206ENST00000415148 TXN2Q99757 166 aa7.91□□□□□ -1.14
CD44-206ENST00000415148 ZNF355PQ9NSJ1 428 aa7.91□□□□□ -1.14
CD44-206ENST00000415148 DYSFO75923 2080 aa7.91□□□□□ -1.14
CD44-206ENST00000415148 CACNA1GO43497 2377 aa7.91□□□□□ -1.14
CD44-206ENST00000415148 E7EUB6 86 aa7.9□□□□□ -1.14
CD44-206ENST00000415148 M0QZ24 198 aa7.9□□□□□ -1.14
CD44-206ENST00000415148 OR2J3O76001 311 aa7.9□□□□□ -1.14
CD44-206ENST00000415148 FSTL3O95633 263 aa7.9□□□□□ -1.14
CD44-206ENST00000415148 PYYP10082 97 aa7.9□□□□□ -1.14
CD44-206ENST00000415148 HIST1H1EP10412 219 aaKnown RBP7.9□□□□□ -1.14
CD44-206ENST00000415148 HNRNPA3P51991 378 aaKnown RBP7.9□□□□□ -1.14
CD44-206ENST00000415148 PMCHL1Q16048 86 aa7.9□□□□□ -1.14
CD44-206ENST00000415148 PVRIGQ6DKI7 326 aa7.9□□□□□ -1.14
CD44-206ENST00000415148 ETFRF1Q6IPR1 90 aa7.9□□□□□ -1.14
CD44-206ENST00000415148 PATE2Q6UY27 113 aa7.9□□□□□ -1.14
CD44-206ENST00000415148 ZNF841Q6ZN19 808 aa7.9□□□□□ -1.14
CD44-206ENST00000415148 ATP5L2Q7Z4Y8 100 aa7.9□□□□□ -1.14
CD44-206ENST00000415148 SPACA3Q8IXA5 215 aa7.9□□□□□ -1.14
CD44-206ENST00000415148 NUDT10Q8NFP7 164 aa7.9□□□□□ -1.14
CD44-206ENST00000415148 NUDT11Q96G61 164 aa7.9□□□□□ -1.14
CD44-206ENST00000415148 UQCR10Q9UDW1 63 aa7.9□□□□□ -1.14
CD44-206ENST00000415148 DMXL1Q9Y485 3027 aa7.9□□□□□ -1.14
CD44-206ENST00000415148 IGKV1D-37A0A075B6S9 117 aa7.9□□□□□ -1.15
CD44-206ENST00000415148 MC5RP33032 325 aa7.9□□□□□ -1.15
CD44-206ENST00000415148 ZNF137PP52743 207 aa7.9□□□□□ -1.15
CD44-206ENST00000415148 FAM162BQ5T6X4 162 aa7.9□□□□□ -1.15
CD44-206ENST00000415148 TMEM200BQ69YZ2 307 aa7.9□□□□□ -1.15
CD44-206ENST00000415148 ZCCHC24Q8N2G6 241 aaKnown RBP7.9□□□□□ -1.15
CD44-206ENST00000415148 NPIPB3Q92617 1050 aa7.9□□□□□ -1.15
CD44-206ENST00000415148 ST6GALNAC6Q969X2 333 aa7.9□□□□□ -1.15
CD44-206ENST00000415148 FXYD5Q96DB9 178 aa7.9□□□□□ -1.15
CD44-206ENST00000415148 URB1-AS1Q96HZ7 61 aa7.9□□□□□ -1.15
CD44-206ENST00000415148 WASHC3Q9Y3C0 194 aa7.9□□□□□ -1.15
CD44-206ENST00000415148 KLF12Q9Y4X4 402 aa7.9□□□□□ -1.15
CD44-206ENST00000415148 PLCE1Q9P212 2302 aa7.9□□□□□ -1.15
CD44-206ENST00000415148 CGB1A6NKQ9 187 aa7.89□□□□□ -1.15
CD44-206ENST00000415148 WT1-ASQ06250 92 aa7.89□□□□□ -1.15
CD44-206ENST00000415148 RUSC1-AS1Q66K80 236 aa7.89□□□□□ -1.15
CD44-206ENST00000415148 TMEM108Q6UXF1 575 aa7.89□□□□□ -1.15
CD44-206ENST00000415148 Q6ZS92 163 aa7.89□□□□□ -1.15
CD44-206ENST00000415148 RBMXL3Q8N7X1 1067 aaKnown RBP7.89□□□□□ -1.15
CD44-206ENST00000415148 NUP35Q8NFH5 326 aa7.89□□□□□ -1.15
CD44-206ENST00000415148 PERPQ96FX8 193 aa7.89□□□□□ -1.15
CD44-206ENST00000415148 FNDC4Q9H6D8 234 aaPredicted RBP7.89□□□□□ -1.15
CD44-206ENST00000415148 CLEC5AQ9NY25 188 aa7.89□□□□□ -1.15
CD44-206ENST00000415148 EPDR1Q9UM22 224 aa7.89□□□□□ -1.15
CD44-206ENST00000415148 SSUH2Q9Y2M2 353 aa7.89□□□□□ -1.15
CD44-206ENST00000415148 C20orf202A1L168 122 aa7.89□□□□□ -1.15
CD44-206ENST00000415148 C17orf100A8MU93 164 aa7.89□□□□□ -1.15
CD44-206ENST00000415148 IGLV2-23P01705 113 aa7.89□□□□□ -1.15
CD44-206ENST00000415148 TSPOP30536 169 aa7.89□□□□□ -1.15
CD44-206ENST00000415148 GNG5P63218 68 aa7.89□□□□□ -1.15
CD44-206ENST00000415148 FAM27E3Q08E93 113 aa7.89□□□□□ -1.15
CD44-206ENST00000415148 VMA21Q3ZAQ7 101 aa7.89□□□□□ -1.15
CD44-206ENST00000415148 Q56UQ5 140 aa7.89□□□□□ -1.15
CD44-206ENST00000415148 LINC00173Q6ZV60 143 aa7.89□□□□□ -1.15
CD44-206ENST00000415148 Q71RC1 249 aaPredicted RBP7.89□□□□□ -1.15
CD44-206ENST00000415148 SSX8Q7RTT4 187 aa7.89□□□□□ -1.15
CD44-206ENST00000415148 ASCL5Q7RTU5 278 aa7.89□□□□□ -1.15
CD44-206ENST00000415148 OR10X1Q8NGY0 326 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms