RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 PMP2P02689 132 aa1.98□□□□□ -2.09
HMGB3P31-201ENST00000413333 CRHP06850 196 aa1.98□□□□□ -2.09
HMGB3P31-201ENST00000413333 METTL15P1P0C7V9 234 aa1.98□□□□□ -2.09
HMGB3P31-201ENST00000413333 SCGB1A1P11684 91 aa1.98□□□□□ -2.09
HMGB3P31-201ENST00000413333 CASP1P29466 404 aa1.98□□□□□ -2.09
HMGB3P31-201ENST00000413333 SMCO1Q147U7 214 aa1.98□□□□□ -2.09
HMGB3P31-201ENST00000413333 KRTAP13-4Q3LI77 160 aa1.98□□□□□ -2.09
HMGB3P31-201ENST00000413333 KHDC3LQ587J8 217 aa1.98□□□□□ -2.09
HMGB3P31-201ENST00000413333 TMEM78Q5T7P6 136 aa1.98□□□□□ -2.09
HMGB3P31-201ENST00000413333 HIST3H2BBQ8N257 126 aa1.98□□□□□ -2.09
HMGB3P31-201ENST00000413333 C12orf45Q8N5I9 185 aaPredicted RBP1.98□□□□□ -2.09
HMGB3P31-201ENST00000413333 OR13D1Q8NGV5 346 aa1.98□□□□□ -2.09
HMGB3P31-201ENST00000413333 PFN4Q8NHR9 129 aa1.98□□□□□ -2.09
HMGB3P31-201ENST00000413333 ZNF625Q96I27 306 aaPredicted RBP1.98□□□□□ -2.09
HMGB3P31-201ENST00000413333 CKLFQ9UBR5 152 aa1.98□□□□□ -2.09
HMGB3P31-201ENST00000413333 UTP11Q9Y3A2 253 aaKnown RBP1.98□□□□□ -2.09
HMGB3P31-201ENST00000413333 NEO1Q92859 1461 aa1.98□□□□□ -2.09
HMGB3P31-201ENST00000413333 SETD5Q9C0A6 1442 aa1.98□□□□□ -2.09
HMGB3P31-201ENST00000413333 YTHDC2Q9H6S0 1430 aaKnown RBP1.98□□□□□ -2.09
HMGB3P31-201ENST00000413333 C1orf196B1AJZ1 125 aa1.97□□□□□ -2.09
HMGB3P31-201ENST00000413333 CLDN25C9JDP6 229 aa1.97□□□□□ -2.09
HMGB3P31-201ENST00000413333 HMGB3O15347 200 aaKnown RBP1.97□□□□□ -2.09
HMGB3P31-201ENST00000413333 ARPC5O15511 151 aa1.97□□□□□ -2.09
HMGB3P31-201ENST00000413333 MFSD11O43934 449 aa1.97□□□□□ -2.09
HMGB3P31-201ENST00000413333 CRPP02741 224 aa1.97□□□□□ -2.09
HMGB3P31-201ENST00000413333 G6PCP35575 357 aa1.97□□□□□ -2.09
HMGB3P31-201ENST00000413333 RHOBP62745 196 aa1.97□□□□□ -2.09
HMGB3P31-201ENST00000413333 Q6Q795 121 aa1.97□□□□□ -2.09
HMGB3P31-201ENST00000413333 LCN15Q6UWW0 184 aa1.97□□□□□ -2.09
HMGB3P31-201ENST00000413333 DPPA3Q6W0C5 159 aa1.97□□□□□ -2.09
HMGB3P31-201ENST00000413333 TRAPPC6BQ86SZ2 158 aa1.97□□□□□ -2.09
HMGB3P31-201ENST00000413333 COA5Q86WW8 74 aa1.97□□□□□ -2.09
HMGB3P31-201ENST00000413333 DHFR2Q86XF0 187 aa1.97□□□□□ -2.09
HMGB3P31-201ENST00000413333 STX19Q8N4C7 294 aa1.97□□□□□ -2.09
HMGB3P31-201ENST00000413333 ZNF439Q8NDP4 499 aa1.97□□□□□ -2.09
HMGB3P31-201ENST00000413333 OR11H6Q8NGC7 330 aa1.97□□□□□ -2.09
HMGB3P31-201ENST00000413333 BORCS5Q969J3 196 aa1.97□□□□□ -2.09
HMGB3P31-201ENST00000413333 TVP23BQ9NYZ1 205 aa1.97□□□□□ -2.09
HMGB3P31-201ENST00000413333 SS18L2Q9UHA2 77 aa1.97□□□□□ -2.09
HMGB3P31-201ENST00000413333 ARHGEF10O15013 1369 aa1.97□□□□□ -2.09
HMGB3P31-201ENST00000413333 CUL9Q8IWT3 2517 aa1.96□□□□□ -2.09
HMGB3P31-201ENST00000413333 ARAP1Q96P48 1450 aa1.96□□□□□ -2.1
HMGB3P31-201ENST00000413333 TRAPPC13A5PLN9 417 aa1.96□□□□□ -2.1
HMGB3P31-201ENST00000413333 IBA57-AS1B1ANH7 110 aa1.96□□□□□ -2.1
HMGB3P31-201ENST00000413333 KPNA4O00629 521 aaPredicted RBP1.96□□□□□ -2.1
HMGB3P31-201ENST00000413333 CLPSP04118 112 aa1.96□□□□□ -2.1
HMGB3P31-201ENST00000413333 UBBP0CG47 229 aa1.96□□□□□ -2.1
HMGB3P31-201ENST00000413333 CRYGAP11844 174 aa1.96□□□□□ -2.1
HMGB3P31-201ENST00000413333 GPX2P18283 190 aa1.96□□□□□ -2.1
HMGB3P31-201ENST00000413333 ZNF345Q14585 488 aa1.96□□□□□ -2.1
HMGB3P31-201ENST00000413333 SPCS2Q15005 226 aa1.96□□□□□ -2.1
HMGB3P31-201ENST00000413333 DEFB115Q30KQ5 88 aa1.96□□□□□ -2.1
HMGB3P31-201ENST00000413333 GOLT1AQ6ZVE7 132 aa1.96□□□□□ -2.1
HMGB3P31-201ENST00000413333 SIGLECL1Q8N7X8 197 aa1.96□□□□□ -2.1
HMGB3P31-201ENST00000413333 MAFIPQ8WZ33 124 aa1.96□□□□□ -2.1
HMGB3P31-201ENST00000413333 C2orf50Q96LR7 162 aa1.96□□□□□ -2.1
HMGB3P31-201ENST00000413333 FAM107BQ9H098 131 aa1.96□□□□□ -2.1
HMGB3P31-201ENST00000413333 PARVBQ9HBI1 364 aa1.96□□□□□ -2.1
HMGB3P31-201ENST00000413333 LRTM1Q9HBL6 345 aa1.96□□□□□ -2.1
HMGB3P31-201ENST00000413333 OSTCQ9NRP0 149 aa1.96□□□□□ -2.1
HMGB3P31-201ENST00000413333 PRNDQ9UKY0 176 aa1.96□□□□□ -2.1
HMGB3P31-201ENST00000413333 AMMECR1Q9Y4X0 333 aaPredicted RBP1.96□□□□□ -2.1
HMGB3P31-201ENST00000413333 RGS12O14924 1447 aa1.96□□□□□ -2.1
HMGB3P31-201ENST00000413333 MIA2Q96PC5 1412 aa1.96□□□□□ -2.1
HMGB3P31-201ENST00000413333 DOCK10Q96BY6 2186 aa1.96□□□□□ -2.1
HMGB3P31-201ENST00000413333 DISP1Q96F81 1524 aa1.96□□□□□ -2.1
HMGB3P31-201ENST00000413333 COL5A3P25940 1745 aaPredicted RBP1.95□□□□□ -2.1
HMGB3P31-201ENST00000413333 SHBGP04278 402 aa1.95□□□□□ -2.1
HMGB3P31-201ENST00000413333 HTR1AP08908 422 aa1.95□□□□□ -2.1
HMGB3P31-201ENST00000413333 SPI1P17947 270 aa1.95□□□□□ -2.1
HMGB3P31-201ENST00000413333 ELOBQ15370 118 aa1.95□□□□□ -2.1
HMGB3P31-201ENST00000413333 LINC01554Q52M75 96 aa1.95□□□□□ -2.1
HMGB3P31-201ENST00000413333 TOMM20LQ6UXN7 152 aa1.95□□□□□ -2.1
HMGB3P31-201ENST00000413333 Q6ZRN7 208 aaPredicted RBP1.95□□□□□ -2.1
HMGB3P31-201ENST00000413333 C10orf126Q8N4M7 172 aa1.95□□□□□ -2.1
HMGB3P31-201ENST00000413333 OR5A1Q8NGJ0 315 aa1.95□□□□□ -2.1
HMGB3P31-201ENST00000413333 MBD3L1Q8WWY6 194 aa1.95□□□□□ -2.1
HMGB3P31-201ENST00000413333 AIF1LQ9BQI0 150 aa1.95□□□□□ -2.1
HMGB3P31-201ENST00000413333 SH3BGRL3Q9H299 93 aa1.95□□□□□ -2.1
HMGB3P31-201ENST00000413333 LYRM2Q9NU23 88 aaPredicted RBP1.95□□□□□ -2.1
HMGB3P31-201ENST00000413333 OR52A1Q9UKL2 312 aa1.95□□□□□ -2.1
HMGB3P31-201ENST00000413333 HSPB11Q9Y547 144 aa1.95□□□□□ -2.1
HMGB3P31-201ENST00000413333 FN1P02751 2386 aaKnown RBP1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 XIRP1Q702N8 1843 aaKnown RBP1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 ZFHX2Q9C0A1 2572 aaPredicted RBP1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 IGKV1D-42A0A075B6H8 117 aa1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 TRGV2A0A075B6R0 118 aa1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 MEIKINA0A087WXM9 373 aa1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 A0A0D9SG52 128 aa1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 MAP1LC3B2A6NCE7 125 aa1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 EFCAB10A6NFE3 127 aa1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 J3QKU1 62 aa1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 M0QZK8 103 aa1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 S100GP29377 79 aa1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 AKR1C3P42330 323 aa1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 YPEL3P61236 119 aaPredicted RBP1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 PSPHP78330 225 aa1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 SURF2Q15527 256 aaPredicted RBP1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 NNATQ16517 81 aa1.94□□□□□ -2.1
HMGB3P31-201ENST00000413333 CCDC58Q4VC31 144 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms