RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 SPTAN1Q13813 2472 aaKnown RBP13.78□□□□□ -0.2
PCDHA13-202ENST00000409494 KIAA1644Q3SXP7 199 aa13.78□□□□□ -0.2
PCDHA13-202ENST00000409494 DKK1O94907 266 aa13.78□□□□□ -0.2
PCDHA13-202ENST00000409494 RPL23P62829 140 aaKnown RBP13.78□□□□□ -0.2
PCDHA13-202ENST00000409494 TEX36Q5VZQ5 186 aa13.78□□□□□ -0.2
PCDHA13-202ENST00000409494 UQCR10Q9UDW1 63 aa13.78□□□□□ -0.2
PCDHA13-202ENST00000409494 OVOL1O14753 267 aa13.78□□□□□ -0.2
PCDHA13-202ENST00000409494 A0A1B0GWJ7 208 aa13.78□□□□□ -0.2
PCDHA13-202ENST00000409494 C5orf63A6NC05 138 aa13.78□□□□□ -0.2
PCDHA13-202ENST00000409494 IGHV3OR16-12A0A075B7B8 117 aa13.77□□□□□ -0.2
PCDHA13-202ENST00000409494 H3BUX3 64 aa13.77□□□□□ -0.2
PCDHA13-202ENST00000409494 CGAP01215 116 aa13.77□□□□□ -0.2
PCDHA13-202ENST00000409494 TRGV9Q99603 122 aa13.77□□□□□ -0.2
PCDHA13-202ENST00000409494 MPDZO75970 2070 aa13.77□□□□□ -0.2
PCDHA13-202ENST00000409494 NMSQ5H8A3 153 aa13.77□□□□□ -0.21
PCDHA13-202ENST00000409494 DKK4Q9UBT3 224 aa13.77□□□□□ -0.21
PCDHA13-202ENST00000409494 FAM223BA6NKX1 122 aa13.77□□□□□ -0.21
PCDHA13-202ENST00000409494 IGHV3-11P01762 117 aa13.77□□□□□ -0.21
PCDHA13-202ENST00000409494 C19orf54Q5BKX5 351 aa13.77□□□□□ -0.21
PCDHA13-202ENST00000409494 TEX38Q6PEX7 206 aa13.77□□□□□ -0.21
PCDHA13-202ENST00000409494 FAM223AQ8IWN6 122 aa13.77□□□□□ -0.21
PCDHA13-202ENST00000409494 LINC00311Q8N616 119 aa13.77□□□□□ -0.21
PCDHA13-202ENST00000409494 ATG101Q9BSB4 218 aa13.77□□□□□ -0.21
PCDHA13-202ENST00000409494 IFITM10A6NMD0 228 aa13.76□□□□□ -0.21
PCDHA13-202ENST00000409494 ATP5G3P48201 142 aa13.76□□□□□ -0.21
PCDHA13-202ENST00000409494 HBBP68871 147 aa13.76□□□□□ -0.21
PCDHA13-202ENST00000409494 OR8A1Q8NGG7 326 aa13.76□□□□□ -0.21
PCDHA13-202ENST00000409494 KAAG1Q9UBP8 84 aa13.76□□□□□ -0.21
PCDHA13-202ENST00000409494 FAM181BA6NEQ2 426 aa13.76□□□□□ -0.21
PCDHA13-202ENST00000409494 LYL1P12980 280 aa13.76□□□□□ -0.21
PCDHA13-202ENST00000409494 KIR3DL3Q8N743 410 aa13.76□□□□□ -0.21
PCDHA13-202ENST00000409494 MBD3L1Q8WWY6 194 aa13.76□□□□□ -0.21
PCDHA13-202ENST00000409494 PGLYRP4Q96LB8 373 aa13.76□□□□□ -0.21
PCDHA13-202ENST00000409494 TMEM70Q9BUB7 260 aa13.76□□□□□ -0.21
PCDHA13-202ENST00000409494 Q9H3A6 140 aa13.76□□□□□ -0.21
PCDHA13-202ENST00000409494 BEX4Q9NWD9 120 aaPredicted RBP13.76□□□□□ -0.21
PCDHA13-202ENST00000409494 KLF2Q9Y5W3 355 aaPredicted RBP13.76□□□□□ -0.21
PCDHA13-202ENST00000409494 FABP5P3A8MUU1 101 aa13.76□□□□□ -0.21
PCDHA13-202ENST00000409494 PSMG4Q5JS54 123 aa13.76□□□□□ -0.21
PCDHA13-202ENST00000409494 SCGB1D4Q6XE38 83 aa13.76□□□□□ -0.21
PCDHA13-202ENST00000409494 SIGLEC9Q9Y336 463 aa13.76□□□□□ -0.21
PCDHA13-202ENST00000409494 HIST1H2BKO60814 126 aa13.75□□□□□ -0.21
PCDHA13-202ENST00000409494 HIST1H2BJP06899 126 aa13.75□□□□□ -0.21
PCDHA13-202ENST00000409494 HIST1H2BOP23527 126 aa13.75□□□□□ -0.21
PCDHA13-202ENST00000409494 HIST1H2BBP33778 126 aa13.75□□□□□ -0.21
PCDHA13-202ENST00000409494 HIST1H2BDP58876 126 aa13.75□□□□□ -0.21
PCDHA13-202ENST00000409494 HIST1H2BCP62807 126 aa13.75□□□□□ -0.21
PCDHA13-202ENST00000409494 HIST2H2BEQ16778 126 aa13.75□□□□□ -0.21
PCDHA13-202ENST00000409494 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.75□□□□□ -0.21
PCDHA13-202ENST00000409494 HIST1H2BHQ93079 126 aa13.75□□□□□ -0.21
PCDHA13-202ENST00000409494 HIST1H2BNQ99877 126 aa13.75□□□□□ -0.21
PCDHA13-202ENST00000409494 HIST1H2BMQ99879 126 aa13.75□□□□□ -0.21
PCDHA13-202ENST00000409494 IL36BQ9NZH7 164 aa13.75□□□□□ -0.21
PCDHA13-202ENST00000409494 HEATR5AQ86XA9 2040 aa13.75□□□□□ -0.21
PCDHA13-202ENST00000409494 C5orf52A6NGY3 159 aa13.75□□□□□ -0.21
PCDHA13-202ENST00000409494 TFF1P04155 84 aa13.75□□□□□ -0.21
PCDHA13-202ENST00000409494 LDLRAD2Q5SZI1 272 aa13.75□□□□□ -0.21
PCDHA13-202ENST00000409494 A0A1B0GW64 132 aa13.75□□□□□ -0.21
PCDHA13-202ENST00000409494 IGHV3-23P01764 117 aa13.75□□□□□ -0.21
PCDHA13-202ENST00000409494 RNF114Q9Y508 228 aa13.75□□□□□ -0.21
PCDHA13-202ENST00000409494 F11RQ9Y624 299 aaKnown RBP13.75□□□□□ -0.21
PCDHA13-202ENST00000409494 A0A1B0GV90 55 aa13.75□□□□□ -0.21
PCDHA13-202ENST00000409494 PHF3Q92576 2039 aaKnown RBP13.75□□□□□ -0.21
PCDHA13-202ENST00000409494 ITLN2Q8WWU7 325 aaPredicted RBP13.74□□□□□ -0.21
PCDHA13-202ENST00000409494 DMRTA2Q96SC8 542 aa13.74□□□□□ -0.21
PCDHA13-202ENST00000409494 SCO2A0A1W2PP80 73 aa13.74□□□□□ -0.21
PCDHA13-202ENST00000409494 LEPROTL1O95214 131 aa13.74□□□□□ -0.21
PCDHA13-202ENST00000409494 ERVK11-1P61568 191 aa13.74□□□□□ -0.21
PCDHA13-202ENST00000409494 MIR17HGQ75NE6 70 aa13.74□□□□□ -0.21
PCDHA13-202ENST00000409494 SNRNP200O75643 2136 aaKnown RBP13.74□□□□□ -0.21
PCDHA13-202ENST00000409494 A6NDN8 102 aa13.74□□□□□ -0.21
PCDHA13-202ENST00000409494 SRD5A1P18405 259 aa13.74□□□□□ -0.21
PCDHA13-202ENST00000409494 RPRMLQ8N4K4 120 aa13.74□□□□□ -0.21
PCDHA13-202ENST00000409494 COPS9Q8WXC6 57 aa13.74□□□□□ -0.21
PCDHA13-202ENST00000409494 IGHV3OR16-13A0A075B7E8 117 aa13.74□□□□□ -0.21
PCDHA13-202ENST00000409494 IGHV3-74A0A0B4J1X5 117 aa13.74□□□□□ -0.21
PCDHA13-202ENST00000409494 TMEM14EPQ6UXP3 125 aa13.74□□□□□ -0.21
PCDHA13-202ENST00000409494 NEUROG1Q92886 237 aa13.74□□□□□ -0.21
PCDHA13-202ENST00000409494 Q5PR19 223 aa13.73□□□□□ -0.21
PCDHA13-202ENST00000409494 C1orf122Q6ZSJ8 110 aa13.73□□□□□ -0.21
PCDHA13-202ENST00000409494 PKDREJQ9NTG1 2253 aa13.73□□□□□ -0.21
PCDHA13-202ENST00000409494 A0A1B0GUT8 65 aa13.73□□□□□ -0.21
PCDHA13-202ENST00000409494 SLC17A3O00476 420 aa13.73□□□□□ -0.21
PCDHA13-202ENST00000409494 TCF21O43680 179 aa13.73□□□□□ -0.21
PCDHA13-202ENST00000409494 SCGB1C2P0DMR2 95 aa13.73□□□□□ -0.21
PCDHA13-202ENST00000409494 SGK494Q96LW2 274 aa13.73□□□□□ -0.21
PCDHA13-202ENST00000409494 ZNF207O43670 478 aaKnown RBP13.73□□□□□ -0.21
PCDHA13-202ENST00000409494 LYPD2Q6UXB3 125 aa13.73□□□□□ -0.21
PCDHA13-202ENST00000409494 TRAV1-1A0A0B4J248 108 aa13.73□□□□□ -0.21
PCDHA13-202ENST00000409494 H3BTX0 84 aa13.73□□□□□ -0.21
PCDHA13-202ENST00000409494 STHQ8IWL8 128 aa13.73□□□□□ -0.21
PCDHA13-202ENST00000409494 OR10AG1Q8NH19 301 aa13.73□□□□□ -0.21
PCDHA13-202ENST00000409494 TRAV21A0A0B4J279 112 aa13.72□□□□□ -0.21
PCDHA13-202ENST00000409494 IGHV2-70DA0A0C4DH43 119 aa13.72□□□□□ -0.21
PCDHA13-202ENST00000409494 ZNF56Q15929 161 aa13.72□□□□□ -0.21
PCDHA13-202ENST00000409494 ZNF562Q6V9R5 426 aa13.72□□□□□ -0.21
PCDHA13-202ENST00000409494 TMEM242Q9NWH2 141 aa13.72□□□□□ -0.21
PCDHA13-202ENST00000409494 CD24P25063 80 aa13.72□□□□□ -0.21
PCDHA13-202ENST00000409494 HINT1P49773 126 aaPredicted RBP13.72□□□□□ -0.21
PCDHA13-202ENST00000409494 C15orf32Q32M92 178 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms