RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 FAM167A-AS1Q96KT0 104 aa16.43■□□□□ 0.22
USP39-203ENST00000409470 USP9XQ93008 2570 aaPredicted RBP16.42■□□□□ 0.22
USP39-203ENST00000409470 ELOA3CA0A087WX78 387 aaPredicted RBP16.42■□□□□ 0.22
USP39-203ENST00000409470 I3L2K1 104 aa16.42■□□□□ 0.22
USP39-203ENST00000409470 UBE2L3P68036 154 aaKnown RBP16.42■□□□□ 0.22
USP39-203ENST00000409470 CX3CL1P78423 397 aa16.42■□□□□ 0.22
USP39-203ENST00000409470 ZNF562Q6V9R5 426 aa16.42■□□□□ 0.22
USP39-203ENST00000409470 OR1L6Q8NGR2 347 aa16.42■□□□□ 0.22
USP39-203ENST00000409470 OR1B1Q8NGR6 318 aa16.42■□□□□ 0.22
USP39-203ENST00000409470 ARPC1AQ92747 370 aa16.42■□□□□ 0.22
USP39-203ENST00000409470 GSX1Q9H4S2 264 aaPredicted RBP16.42■□□□□ 0.22
USP39-203ENST00000409470 BIN3Q9NQY0 253 aa16.42■□□□□ 0.22
USP39-203ENST00000409470 IGHV4-61A0A0C4DH41 118 aa16.41■□□□□ 0.22
USP39-203ENST00000409470 H7BYZ3 331 aa16.41■□□□□ 0.22
USP39-203ENST00000409470 NDUFS8O00217 210 aa16.41■□□□□ 0.22
USP39-203ENST00000409470 LINC00305Q7Z4B0 112 aa16.41■□□□□ 0.22
USP39-203ENST00000409470 LINC01551Q86U37 167 aa16.41■□□□□ 0.22
USP39-203ENST00000409470 POLR3KQ9Y2Y1 108 aaPredicted RBP16.41■□□□□ 0.22
USP39-203ENST00000409470 ASH1LQ9NR48 2969 aaKnown RBP16.41■□□□□ 0.22
USP39-203ENST00000409470 BRS3P32247 399 aa16.41■□□□□ 0.22
USP39-203ENST00000409470 ZNF843Q8N446 348 aa16.41■□□□□ 0.22
USP39-203ENST00000409470 AURKAIP1Q9NWT8 199 aaPredicted RBP16.41■□□□□ 0.22
USP39-203ENST00000409470 ZFYVE26Q68DK2 2539 aa16.4■□□□□ 0.22
USP39-203ENST00000409470 NPFFO15130 113 aa16.4■□□□□ 0.22
USP39-203ENST00000409470 SMUG1Q53HV7 270 aa16.4■□□□□ 0.22
USP39-203ENST00000409470 FAM120AOSQ5T036 256 aa16.4■□□□□ 0.22
USP39-203ENST00000409470 C11orf52Q96A22 123 aa16.4■□□□□ 0.22
USP39-203ENST00000409470 ANAPC16Q96DE5 110 aa16.4■□□□□ 0.22
USP39-203ENST00000409470 PERPQ96FX8 193 aa16.4■□□□□ 0.22
USP39-203ENST00000409470 PAXXQ9BUH6 204 aa16.4■□□□□ 0.22
USP39-203ENST00000409470 PGPEP1LA6NFU8 196 aa16.4■□□□□ 0.22
USP39-203ENST00000409470 NECAP1Q8NC96 275 aa16.4■□□□□ 0.22
USP39-203ENST00000409470 AJUBAQ96IF1 538 aa16.4■□□□□ 0.22
USP39-203ENST00000409470 OR5B12Q96R08 314 aa16.4■□□□□ 0.22
USP39-203ENST00000409470 C1RLQ9NZP8 487 aa16.4■□□□□ 0.22
USP39-203ENST00000409470 FAM210BQ96KR6 192 aa16.39■□□□□ 0.21
USP39-203ENST00000409470 OR51M1Q9H341 326 aa16.39■□□□□ 0.21
USP39-203ENST00000409470 MYO18BQ8IUG5 2567 aa16.39■□□□□ 0.21
USP39-203ENST00000409470 TRBV20OR9-2A0A075B6H5 130 aa16.38■□□□□ 0.21
USP39-203ENST00000409470 A0A1W2PRE2 83 aa16.38■□□□□ 0.21
USP39-203ENST00000409470 K7EIM0 57 aa16.38■□□□□ 0.21
USP39-203ENST00000409470 HYPMO75409 117 aa16.38■□□□□ 0.21
USP39-203ENST00000409470 IGLC1P0CG04 106 aa16.38■□□□□ 0.21
USP39-203ENST00000409470 PYYP10082 97 aa16.38■□□□□ 0.21
USP39-203ENST00000409470 C1QL4Q86Z23 238 aa16.38■□□□□ 0.21
USP39-203ENST00000409470 RASL11BQ9BPW5 248 aa16.38■□□□□ 0.21
USP39-203ENST00000409470 CENPVL3A0A0U1RRI6 287 aa16.38■□□□□ 0.21
USP39-203ENST00000409470 VWC2LB2RUY7 222 aa16.38■□□□□ 0.21
USP39-203ENST00000409470 S100A6P06703 90 aa16.38■□□□□ 0.21
USP39-203ENST00000409470 S100PP25815 95 aa16.38■□□□□ 0.21
USP39-203ENST00000409470 CRYBB3P26998 211 aa16.38■□□□□ 0.21
USP39-203ENST00000409470 GALR1P47211 349 aa16.38■□□□□ 0.21
USP39-203ENST00000409470 SUMO1P63165 101 aaKnown RBP16.38■□□□□ 0.21
USP39-203ENST00000409470 NDPQ00604 133 aa16.38■□□□□ 0.21
USP39-203ENST00000409470 PAX8Q06710 450 aa16.38■□□□□ 0.21
USP39-203ENST00000409470 KLF17Q5JT82 389 aaPredicted RBP16.38■□□□□ 0.21
USP39-203ENST00000409470 RBM14Q96PK6 669 aaKnown RBP16.38■□□□□ 0.21
USP39-203ENST00000409470 IGHV4-30-2A0A087WSY4 118 aa16.37■□□□□ 0.21
USP39-203ENST00000409470 NPIPB5A8MRT5 1133 aa16.37■□□□□ 0.21
USP39-203ENST00000409470 GGTLC3B5MD39 225 aa16.37■□□□□ 0.21
USP39-203ENST00000409470 RPL35P42766 123 aaKnown RBP16.37■□□□□ 0.21
USP39-203ENST00000409470 TIGITQ495A1 244 aa16.37■□□□□ 0.21
USP39-203ENST00000409470 PIP4P2Q8N4L2 257 aa16.37■□□□□ 0.21
USP39-203ENST00000409470 HNF1AP20823 631 aa16.36■□□□□ 0.21
USP39-203ENST00000409470 ASPHD1Q5U4P2 390 aa16.36■□□□□ 0.21
USP39-203ENST00000409470 Q8N9W7 124 aa16.36■□□□□ 0.21
USP39-203ENST00000409470 PSG1P11464 419 aa16.36■□□□□ 0.21
USP39-203ENST00000409470 LYZP61626 148 aa16.36■□□□□ 0.21
USP39-203ENST00000409470 STXBP6Q8NFX7 210 aa16.36■□□□□ 0.21
USP39-203ENST00000409470 ABCA1O95477 2261 aa16.36■□□□□ 0.21
USP39-203ENST00000409470 TRBV24-1A0A075B6N3 115 aa16.35■□□□□ 0.21
USP39-203ENST00000409470 TTC9CQ8N5M4 171 aa16.35■□□□□ 0.21
USP39-203ENST00000409470 OCC1Q8TAD7 63 aa16.35■□□□□ 0.21
USP39-203ENST00000409470 ZNF462Q96JM2 2506 aa16.35■□□□□ 0.21
USP39-203ENST00000409470 IGHV3OR16-10A0A075B7F0 116 aa16.35■□□□□ 0.21
USP39-203ENST00000409470 MDFIC2A0A1B0GVS7 189 aa16.35■□□□□ 0.21
USP39-203ENST00000409470 HELTA6NFD8 242 aa16.35■□□□□ 0.21
USP39-203ENST00000409470 PFN1P07737 140 aaKnown RBP16.35■□□□□ 0.21
USP39-203ENST00000409470 CD99P14209 185 aa16.35■□□□□ 0.21
USP39-203ENST00000409470 PLP1P60201 277 aa16.35■□□□□ 0.21
USP39-203ENST00000409470 SNRPEP62304 92 aaKnown RBP16.35■□□□□ 0.21
USP39-203ENST00000409470 FXYD5Q96DB9 178 aa16.35■□□□□ 0.21
USP39-203ENST00000409470 IGHV7-81A0A0B4J1V7 117 aa16.34■□□□□ 0.21
USP39-203ENST00000409470 C9JCJ5 164 aa16.34■□□□□ 0.21
USP39-203ENST00000409470 FABP1P07148 127 aa16.34■□□□□ 0.21
USP39-203ENST00000409470 RD3LP0DJH9 198 aa16.34■□□□□ 0.21
USP39-203ENST00000409470 COX6B1P14854 86 aa16.34■□□□□ 0.21
USP39-203ENST00000409470 NRGNQ92686 78 aa16.34■□□□□ 0.21
USP39-203ENST00000409470 SFRP2Q96HF1 295 aa16.34■□□□□ 0.21
USP39-203ENST00000409470 ELOVL1Q9BW60 279 aa16.34■□□□□ 0.21
USP39-203ENST00000409470 HIGD1AQ9Y241 93 aa16.34■□□□□ 0.21
USP39-203ENST00000409470 IGLV11-55A0A075B6I3 123 aa16.33■□□□□ 0.21
USP39-203ENST00000409470 PPP1R2P9O14990 202 aa16.33■□□□□ 0.21
USP39-203ENST00000409470 IGKV1-17P01599 117 aa16.33■□□□□ 0.21
USP39-203ENST00000409470 FANCD2OSQ96PS1 177 aa16.33■□□□□ 0.21
USP39-203ENST00000409470 ABCA2Q9BZC7 2435 aa16.33■□□□□ 0.2
USP39-203ENST00000409470 HLA-DRB1P01911 266 aa16.33■□□□□ 0.2
USP39-203ENST00000409470 SNRPCP09234 159 aaKnown RBP16.33■□□□□ 0.2
USP39-203ENST00000409470 GNG4P50150 75 aa16.33■□□□□ 0.2
USP39-203ENST00000409470 S4R3C0 116 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms