RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 SCGB1C2P0DMR2 95 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 MPV17P39210 176 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 LPAR6P43657 344 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 C1DQ13901 141 aaKnown RBP2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 DIAPH2-AS1Q14236 149 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 MEIG1Q5JSS6 88 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 LHFPL1Q86WI0 220 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 YIPF7Q8N8F6 280 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 BPIFB6Q8NFQ5 453 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 SCGB1C1Q8TD33 95 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 CT55Q8WUE5 264 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 TWIST2Q8WVJ9 160 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 ITLN2Q8WWU7 325 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 TMEM106AQ96A25 262 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 STARD4Q96DR4 205 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 SLC25A44Q96H78 314 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 OR4C12Q96R67 309 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 PEBP4Q96S96 227 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 POMPQ9Y244 141 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 AP4S1Q9Y587 144 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 ERVK-7P63135 1459 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 SHANK2Q9UPX8 1470 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 KIF1AQ12756 1690 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 EPRSP07814 1512 aaKnown RBP2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 KIF13BQ9NQT8 1826 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 RPRD2Q5VT52 1461 aaKnown RBP2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 NRXN1Q9ULB1 1477 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 IGLV3-12A0A075B6K2 115 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 ODAMA1E959 279 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 B4DEV8 164 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 FNDC10F2Z333 226 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 WISP3O95389 354 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 IGHG2P01859 326 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 SHBGP04278 402 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 HLA-DQB2P05538 268 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 SPINK8P0C7L1 97 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 PPP1CCP36873 323 aaKnown RBP2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 NUDT2P50583 147 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 FUT5Q11128 374 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 MMDQ15546 238 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 C10orf91Q5T1B1 145 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 MRPL2Q5T653 305 aaKnown RBP2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 TMEM244Q5VVB8 128 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 TMEM14EPQ6UXP3 125 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 FAM19A3Q7Z5A8 133 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 ZFP62Q8NB50 900 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 APCDD1LQ8NCL9 501 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 OR51T1Q8NGJ9 327 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 KLF14Q8TD94 323 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 HYLS1Q96M11 299 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 ZNF586Q9NXT0 402 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 SPANXCQ9NY87 97 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 RPUSD1Q9UJJ7 312 aaKnown RBP2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 PCYT1BQ9Y5K3 369 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 SOX21Q9Y651 276 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 DISP1Q96F81 1524 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 SCN4AP35499 1836 aa2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 DNMT1P26358 1616 aaKnown RBP2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 ZCCHC11Q5TAX3 1644 aaKnown RBP2.86□□□□□ -1.95
HMGB1P13-201ENST00000406019 MAGI2Q86UL8 1455 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 ARAP3Q8WWN8 1544 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 UGGT2Q9NYU1 1516 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 TRDV1A0A1B0GX56 115 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 LRCOL1A6NCL2 159 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 OR51F1A6NGY5 319 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 RIIAD1A6NNX1 92 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 C16orf90A8MZG2 172 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 F5H5P2 479 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 GABARAPH6UMI1 98 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 M0R129 80 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 NDUFC2O95298 119 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 CFDP00746 253 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 GPX1P07203 203 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 H2BFSP57053 126 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 MOBPQ13875 183 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 FKBP1CQ5VVH2 108 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 TTC9CQ8N5M4 171 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 LY6G5BQ8NDX9 201 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 OR52R1Q8NGF1 315 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 HIST1H2BLQ99880 126 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 WDR61Q9GZS3 305 aaKnown RBP2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 SMCO4Q9NRQ5 59 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 AMMECR1Q9Y4X0 333 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 MYH13Q9UKX3 1938 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 ABCA3Q99758 1704 aa2.85□□□□□ -1.95
HMGB1P13-201ENST00000406019 A2ML1A8K2U0 1454 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 ZSWIM8A7E2V4 1837 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 BRWD3Q6RI45 1802 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 KDM5CP41229 1560 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 ATG2AQ2TAZ0 1938 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 hCG_1818297A0A087WSY0 165 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 IGHV3-43A0A0B4J1X8 118 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 TRAV5A0A0B4J249 113 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 TRAV4A0A0B4J268 109 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 TEX50A0A1B0GTY4 177 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 GGT3PA6NGU5 568 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 A8MT66 165 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 A8MUU9 505 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms