RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 BTNL8Q6UX41 500 aa17.06■□□□□ 0.32
EPCAM-202ENST00000405271 GINS3Q9BRX5 216 aa17.06■□□□□ 0.32
EPCAM-202ENST00000405271 TRAV30A0A087WSZ9 112 aa17.05■□□□□ 0.32
EPCAM-202ENST00000405271 GNG7O60262 68 aa17.05■□□□□ 0.32
EPCAM-202ENST00000405271 RAB31Q13636 194 aa17.05■□□□□ 0.32
EPCAM-202ENST00000405271 Q56UQ5 140 aa17.05■□□□□ 0.32
EPCAM-202ENST00000405271 LCNL1Q6ZST4 164 aa17.05■□□□□ 0.32
EPCAM-202ENST00000405271 BAP18Q8IXM2 172 aa17.05■□□□□ 0.32
EPCAM-202ENST00000405271 ST8SIA2Q92186 375 aa17.05■□□□□ 0.32
EPCAM-202ENST00000405271 CCDC140Q96MF4 163 aa17.05■□□□□ 0.32
EPCAM-202ENST00000405271 NPCDR1Q9BY65 106 aa17.05■□□□□ 0.32
EPCAM-202ENST00000405271 S4R3C0 116 aa17.05■□□□□ 0.32
EPCAM-202ENST00000405271 IGKV1OR2-108A0A075B7D4 117 aa17.04■□□□□ 0.32
EPCAM-202ENST00000405271 ZFP92A6NM28 416 aa17.04■□□□□ 0.32
EPCAM-202ENST00000405271 F8W735 103 aaPredicted RBP17.04■□□□□ 0.32
EPCAM-202ENST00000405271 RPLP1P05386 114 aaKnown RBP17.04■□□□□ 0.32
EPCAM-202ENST00000405271 FOXL1Q12952 345 aa17.04■□□□□ 0.32
EPCAM-202ENST00000405271 C3orf56Q8N813 242 aa17.04■□□□□ 0.32
EPCAM-202ENST00000405271 ZNF491Q8N8L2 437 aa17.04■□□□□ 0.32
EPCAM-202ENST00000405271 HSD17B11Q8NBQ5 300 aa17.04■□□□□ 0.32
EPCAM-202ENST00000405271 GNPNAT1Q96EK6 184 aaPredicted RBP17.04■□□□□ 0.32
EPCAM-202ENST00000405271 MGST2Q99735 147 aa17.04■□□□□ 0.32
EPCAM-202ENST00000405271 KCNIP2Q9NS61 270 aa17.04■□□□□ 0.32
EPCAM-202ENST00000405271 TIMM9Q9Y5J7 89 aa17.04■□□□□ 0.32
EPCAM-202ENST00000405271 C17orf112F2Z3M2 114 aa17.03■□□□□ 0.32
EPCAM-202ENST00000405271 HAX1O00165 279 aa17.03■□□□□ 0.32
EPCAM-202ENST00000405271 IGHV3-23P01764 117 aa17.03■□□□□ 0.32
EPCAM-202ENST00000405271 OR10J1P30954 320 aa17.03■□□□□ 0.32
EPCAM-202ENST00000405271 KIAA0141Q14154 515 aaPredicted RBP17.03■□□□□ 0.32
EPCAM-202ENST00000405271 UBE2E2Q96LR5 201 aa17.03■□□□□ 0.32
EPCAM-202ENST00000405271 TRGV9Q99603 122 aa17.03■□□□□ 0.32
EPCAM-202ENST00000405271 IGKV1D-37A0A075B6S9 117 aa17.02■□□□□ 0.32
EPCAM-202ENST00000405271 AGPAT2O15120 278 aa17.02■□□□□ 0.32
EPCAM-202ENST00000405271 IGLC1P0CG04 106 aa17.02■□□□□ 0.32
EPCAM-202ENST00000405271 ATP6V0CP27449 155 aa17.02■□□□□ 0.32
EPCAM-202ENST00000405271 RUNX1Q01196 453 aa17.02■□□□□ 0.32
EPCAM-202ENST00000405271 ZNF343Q6P1L6 599 aa17.02■□□□□ 0.32
EPCAM-202ENST00000405271 PSMG3Q9BT73 122 aaPredicted RBP17.02■□□□□ 0.32
EPCAM-202ENST00000405271 GGTLC1Q9BX51 225 aa17.02■□□□□ 0.32
EPCAM-202ENST00000405271 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.01■□□□□ 0.31
EPCAM-202ENST00000405271 TCRBV4S1A1TA0A5B7 111 aa17.01■□□□□ 0.31
EPCAM-202ENST00000405271 FABP1P07148 127 aa17.01■□□□□ 0.31
EPCAM-202ENST00000405271 CAMLGP49069 296 aa17.01■□□□□ 0.31
EPCAM-202ENST00000405271 ZNF709Q8N972 641 aa17.01■□□□□ 0.31
EPCAM-202ENST00000405271 WFDC12Q8WWY7 111 aa17.01■□□□□ 0.31
EPCAM-202ENST00000405271 GPR183P32249 361 aa17.01■□□□□ 0.31
EPCAM-202ENST00000405271 EIF5AL1Q6IS14 154 aaKnown RBP17.01■□□□□ 0.31
EPCAM-202ENST00000405271 SPSB3Q6PJ21 355 aa17.01■□□□□ 0.31
EPCAM-202ENST00000405271 CLEC19AQ6UXS0 136 aa17.01■□□□□ 0.31
EPCAM-202ENST00000405271 PHYHIPLQ96FC7 376 aa17.01■□□□□ 0.31
EPCAM-202ENST00000405271 RSG1Q9BU20 258 aa17.01■□□□□ 0.31
EPCAM-202ENST00000405271 OR2T8A6NH00 312 aa17■□□□□ 0.31
EPCAM-202ENST00000405271 NUPL2O15504 423 aaKnown RBP17■□□□□ 0.31
EPCAM-202ENST00000405271 IGHV3-11P01762 117 aa17■□□□□ 0.31
EPCAM-202ENST00000405271 LGALS1P09382 135 aaKnown RBP17■□□□□ 0.31
EPCAM-202ENST00000405271 SPP1P10451 314 aa17■□□□□ 0.31
EPCAM-202ENST00000405271 SELENOTP62341 195 aa17■□□□□ 0.31
EPCAM-202ENST00000405271 TCTEX1D4Q5JR98 221 aa17■□□□□ 0.31
EPCAM-202ENST00000405271 CYP2G1PQ6ZSU1 146 aa17■□□□□ 0.31
EPCAM-202ENST00000405271 TGOLN2O43493 480 aa16.99■□□□□ 0.31
EPCAM-202ENST00000405271 SEC11BP0C7V7 166 aa16.99■□□□□ 0.31
EPCAM-202ENST00000405271 CDX1P47902 265 aaPredicted RBP16.99■□□□□ 0.31
EPCAM-202ENST00000405271 IGKV1-17P01599 117 aa16.98■□□□□ 0.31
EPCAM-202ENST00000405271 CLEC3BP05452 202 aa16.98■□□□□ 0.31
EPCAM-202ENST00000405271 RPL29P47914 159 aaKnown RBP16.98■□□□□ 0.31
EPCAM-202ENST00000405271 YPEL3P61236 119 aaPredicted RBP16.98■□□□□ 0.31
EPCAM-202ENST00000405271 TIGITQ495A1 244 aa16.98■□□□□ 0.31
EPCAM-202ENST00000405271 OR2G3Q8NGZ4 309 aa16.98■□□□□ 0.31
EPCAM-202ENST00000405271 SH3BGRL3Q9H299 93 aa16.98■□□□□ 0.31
EPCAM-202ENST00000405271 SLC25A32Q9H2D1 315 aa16.98■□□□□ 0.31
EPCAM-202ENST00000405271 GNB4Q9HAV0 340 aa16.98■□□□□ 0.31
EPCAM-202ENST00000405271 SLC45A2Q9UMX9 530 aa16.98■□□□□ 0.31
EPCAM-202ENST00000405271 NBEAL1Q6ZS30 2694 aa16.98■□□□□ 0.31
EPCAM-202ENST00000405271 CTSGP08311 255 aa16.97■□□□□ 0.31
EPCAM-202ENST00000405271 ARL3P36405 182 aa16.97■□□□□ 0.31
EPCAM-202ENST00000405271 SERF2P84101 59 aa16.97■□□□□ 0.31
EPCAM-202ENST00000405271 KHDC1LQ5JSQ8 128 aa16.97■□□□□ 0.31
EPCAM-202ENST00000405271 PXMP4Q9Y6I8 212 aa16.97■□□□□ 0.31
EPCAM-202ENST00000405271 TOMM40O96008 361 aa16.96■□□□□ 0.31
EPCAM-202ENST00000405271 CD28P10747 220 aa16.96■□□□□ 0.31
EPCAM-202ENST00000405271 PRR20EP86478 221 aa16.96■□□□□ 0.31
EPCAM-202ENST00000405271 PRR20CP86479 221 aa16.96■□□□□ 0.31
EPCAM-202ENST00000405271 PRR20DP86480 221 aa16.96■□□□□ 0.31
EPCAM-202ENST00000405271 PRR20BP86481 221 aa16.96■□□□□ 0.31
EPCAM-202ENST00000405271 PRR20AP86496 221 aa16.96■□□□□ 0.31
EPCAM-202ENST00000405271 ZNF90Q03938 601 aa16.96■□□□□ 0.31
EPCAM-202ENST00000405271 STPG3Q8N7X2 389 aa16.96■□□□□ 0.31
EPCAM-202ENST00000405271 C4orf3Q8WVX3 66 aa16.96■□□□□ 0.31
EPCAM-202ENST00000405271 ZNF747Q9BV97 191 aa16.96■□□□□ 0.31
EPCAM-202ENST00000405271 PEF1Q9UBV8 284 aaKnown RBP16.96■□□□□ 0.31
EPCAM-202ENST00000405271 TSPAN15O95858 294 aa16.96■□□□□ 0.3
EPCAM-202ENST00000405271 CFDP00746 253 aaPredicted RBP16.96■□□□□ 0.3
EPCAM-202ENST00000405271 ADMP35318 185 aa16.96■□□□□ 0.3
EPCAM-202ENST00000405271 B2MP61769 119 aa16.96■□□□□ 0.3
EPCAM-202ENST00000405271 RELQ04864 619 aaPredicted RBP16.96■□□□□ 0.3
EPCAM-202ENST00000405271 ZNF616Q08AN1 781 aa16.96■□□□□ 0.3
EPCAM-202ENST00000405271 MIC13Q5XKP0 118 aa16.96■□□□□ 0.3
EPCAM-202ENST00000405271 BPIFCQ8NFQ6 507 aa16.96■□□□□ 0.3
EPCAM-202ENST00000405271 TMED6Q8WW62 240 aa16.96■□□□□ 0.3
EPCAM-202ENST00000405271 CHRDL1Q9BU40 450 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms