RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 CHTOPQ9Y3Y2 248 aaKnown RBP12.5□□□□□ -0.41
CHL1-202ENST00000397491 IGKV1-5P01602 117 aa12.5□□□□□ -0.41
CHL1-202ENST00000397491 PF4V1P10720 104 aa12.5□□□□□ -0.41
CHL1-202ENST00000397491 Q0VG73 95 aa12.5□□□□□ -0.41
CHL1-202ENST00000397491 TMEM155Q4W5P6 130 aa12.5□□□□□ -0.41
CHL1-202ENST00000397491 MRPL20Q9BYC9 149 aaKnown RBP12.5□□□□□ -0.41
CHL1-202ENST00000397491 FBXL15Q9H469 300 aa12.5□□□□□ -0.41
CHL1-202ENST00000397491 MOB4Q9Y3A3 225 aa12.5□□□□□ -0.41
CHL1-202ENST00000397491 TTC28Q96AY4 2481 aa12.5□□□□□ -0.41
CHL1-202ENST00000397491 QRFPP83859 136 aa12.5□□□□□ -0.41
CHL1-202ENST00000397491 SAA2-SAA4A0A096LPE2 208 aa12.5□□□□□ -0.41
CHL1-202ENST00000397491 SAA2P0DJI9 122 aaPredicted RBP12.5□□□□□ -0.41
CHL1-202ENST00000397491 ZNF138P52744 262 aa12.5□□□□□ -0.41
CHL1-202ENST00000397491 FAM201AQ5SY85 155 aa12.5□□□□□ -0.41
CHL1-202ENST00000397491 SLC25A45Q8N413 288 aa12.5□□□□□ -0.41
CHL1-202ENST00000397491 PRR33A8MZF0 331 aa12.49□□□□□ -0.41
CHL1-202ENST00000397491 SELLP14151 372 aa12.49□□□□□ -0.41
CHL1-202ENST00000397491 CD69Q07108 199 aa12.49□□□□□ -0.41
CHL1-202ENST00000397491 IGHV3OR16-8A0A075B7F1 116 aa12.49□□□□□ -0.41
CHL1-202ENST00000397491 IGKV3OR2-268A0A0C4DH90 116 aa12.49□□□□□ -0.41
CHL1-202ENST00000397491 TCRBV4S1A1TA0A5B7 111 aa12.49□□□□□ -0.41
CHL1-202ENST00000397491 FABP5P3A8MUU1 101 aa12.49□□□□□ -0.41
CHL1-202ENST00000397491 Q6ZWC4 215 aa12.49□□□□□ -0.41
CHL1-202ENST00000397491 SHISA5Q8N114 240 aa12.49□□□□□ -0.41
CHL1-202ENST00000397491 LY96Q9Y6Y9 160 aa12.49□□□□□ -0.41
CHL1-202ENST00000397491 D6R8Y8 96 aa12.49□□□□□ -0.41
CHL1-202ENST00000397491 DYNLRB2Q8TF09 96 aa12.49□□□□□ -0.41
CHL1-202ENST00000397491 SMPXQ9UHP9 88 aa12.49□□□□□ -0.41
CHL1-202ENST00000397491 TIAF1O95411 115 aa12.49□□□□□ -0.41
CHL1-202ENST00000397491 SLC25A48Q6ZT89 311 aaKnown RBP12.49□□□□□ -0.41
CHL1-202ENST00000397491 MGST2Q99735 147 aa12.49□□□□□ -0.41
CHL1-202ENST00000397491 DLX4Q92988 240 aaPredicted RBP12.48□□□□□ -0.41
CHL1-202ENST00000397491 EPOPA6NHQ4 379 aa12.48□□□□□ -0.41
CHL1-202ENST00000397491 PPIFP30405 207 aaKnown RBP12.48□□□□□ -0.41
CHL1-202ENST00000397491 PSG7Q13046 419 aa12.48□□□□□ -0.41
CHL1-202ENST00000397491 DDB2Q92466 427 aa12.48□□□□□ -0.41
CHL1-202ENST00000397491 MYOFQ9NZM1 2061 aa12.48□□□□□ -0.41
CHL1-202ENST00000397491 CEACAM4O75871 244 aa12.48□□□□□ -0.41
CHL1-202ENST00000397491 DUTP33316 252 aaKnown RBP12.48□□□□□ -0.41
CHL1-202ENST00000397491 FAM71F2Q6NXP2 309 aa12.48□□□□□ -0.41
CHL1-202ENST00000397491 FREM3P0C091 2139 aa12.48□□□□□ -0.41
CHL1-202ENST00000397491 BDP1A6H8Y1 2624 aa12.48□□□□□ -0.41
CHL1-202ENST00000397491 PRB4P10163 310 aaPredicted RBP12.48□□□□□ -0.41
CHL1-202ENST00000397491 CD300EQ496F6 205 aaPredicted RBP12.48□□□□□ -0.41
CHL1-202ENST00000397491 FAM216BQ8N7L0 139 aa12.48□□□□□ -0.41
CHL1-202ENST00000397491 IGKV1-27A0A075B6S5 117 aa12.47□□□□□ -0.41
CHL1-202ENST00000397491 NCR2O95944 276 aa12.47□□□□□ -0.41
CHL1-202ENST00000397491 NRN1LQ496H8 165 aa12.47□□□□□ -0.41
CHL1-202ENST00000397491 C5orf24Q7Z6I8 188 aa12.47□□□□□ -0.41
CHL1-202ENST00000397491 COL6A6A6NMZ7 2263 aa12.47□□□□□ -0.41
CHL1-202ENST00000397491 ERG28Q9UKR5 140 aa12.47□□□□□ -0.41
CHL1-202ENST00000397491 IGKV3-20P01619 116 aa12.47□□□□□ -0.41
CHL1-202ENST00000397491 MORN2Q502X0 79 aa12.47□□□□□ -0.41
CHL1-202ENST00000397491 RPRMLQ8N4K4 120 aa12.47□□□□□ -0.41
CHL1-202ENST00000397491 ESPL1Q14674 2120 aa12.47□□□□□ -0.41
CHL1-202ENST00000397491 IGHV3OR16-12A0A075B7B8 117 aa12.47□□□□□ -0.41
CHL1-202ENST00000397491 TMEM249Q2WGJ8 235 aa12.47□□□□□ -0.41
CHL1-202ENST00000397491 YPEL1O60688 119 aa12.46□□□□□ -0.41
CHL1-202ENST00000397491 TFF1P04155 84 aa12.46□□□□□ -0.41
CHL1-202ENST00000397491 PRCDQ00LT1 54 aa12.46□□□□□ -0.41
CHL1-202ENST00000397491 KLF17Q5JT82 389 aaPredicted RBP12.46□□□□□ -0.41
CHL1-202ENST00000397491 YPEL2Q96QA6 119 aa12.46□□□□□ -0.41
CHL1-202ENST00000397491 NPFFO15130 113 aa12.46□□□□□ -0.41
CHL1-202ENST00000397491 SSBP2P81877 361 aaPredicted RBP12.46□□□□□ -0.41
CHL1-202ENST00000397491 ATP5G2Q06055 141 aa12.46□□□□□ -0.41
CHL1-202ENST00000397491 LHFPL4Q7Z7J7 247 aa12.46□□□□□ -0.41
CHL1-202ENST00000397491 SRSF7Q16629 238 aaKnown RBP eCLIP12.46□□□□□ -0.41
CHL1-202ENST00000397491 TIMP4Q99727 224 aa12.46□□□□□ -0.41
CHL1-202ENST00000397491 TSSC4Q9Y5U2 329 aaPredicted RBP12.46□□□□□ -0.41
CHL1-202ENST00000397491 ORMDL2Q53FV1 153 aa12.45□□□□□ -0.42
CHL1-202ENST00000397491 C1orf122Q6ZSJ8 110 aa12.45□□□□□ -0.42
CHL1-202ENST00000397491 STPG4Q8N801 248 aa12.45□□□□□ -0.42
CHL1-202ENST00000397491 C21orf62Q9NYP8 219 aa12.45□□□□□ -0.42
CHL1-202ENST00000397491 FAM90A9PA6NNJ1 464 aa12.45□□□□□ -0.42
CHL1-202ENST00000397491 K7EP13 123 aa12.45□□□□□ -0.42
CHL1-202ENST00000397491 RGPD3A6NKT7 1758 aaPredicted RBP12.45□□□□□ -0.42
CHL1-202ENST00000397491 RGPD4Q7Z3J3 1758 aa12.45□□□□□ -0.42
CHL1-202ENST00000397491 BRWD3Q6RI45 1802 aa12.45□□□□□ -0.42
CHL1-202ENST00000397491 TRBV7-9A0A0J9YWB2 115 aa12.45□□□□□ -0.42
CHL1-202ENST00000397491 TM4SF5O14894 197 aa12.45□□□□□ -0.42
CHL1-202ENST00000397491 SMAD7O15105 426 aaKnown RBP12.45□□□□□ -0.42
CHL1-202ENST00000397491 EEF1AKMT3Q96AZ1 226 aa12.45□□□□□ -0.42
CHL1-202ENST00000397491 TNFRSF18Q9Y5U5 241 aa12.45□□□□□ -0.42
CHL1-202ENST00000397491 ARID2Q68CP9 1835 aa12.45□□□□□ -0.42
CHL1-202ENST00000397491 A0A0G2JRQ6 117 aa12.45□□□□□ -0.42
CHL1-202ENST00000397491 LHX2P50458 406 aa12.45□□□□□ -0.42
CHL1-202ENST00000397491 SRSF6Q13247 344 aaKnown RBP12.45□□□□□ -0.42
CHL1-202ENST00000397491 AHRRA9YTQ3 701 aa12.45□□□□□ -0.42
CHL1-202ENST00000397491 CELA3AP09093 270 aa12.45□□□□□ -0.42
CHL1-202ENST00000397491 PGPEP1Q9NXJ5 209 aa12.45□□□□□ -0.42
CHL1-202ENST00000397491 H3BRM9 83 aa12.44□□□□□ -0.42
CHL1-202ENST00000397491 RSPO3Q9BXY4 272 aaPredicted RBP12.44□□□□□ -0.42
CHL1-202ENST00000397491 DOCK4Q8N1I0 1966 aa12.44□□□□□ -0.42
CHL1-202ENST00000397491 ZNF831Q5JPB2 1677 aa12.44□□□□□ -0.42
CHL1-202ENST00000397491 ASCL2Q99929 193 aa12.44□□□□□ -0.42
CHL1-202ENST00000397491 CHAC1Q9BUX1 264 aa12.44□□□□□ -0.42
CHL1-202ENST00000397491 H7C1H1 209 aa12.44□□□□□ -0.42
CHL1-202ENST00000397491 CITED1Q99966 193 aa12.44□□□□□ -0.42
CHL1-202ENST00000397491 ZNF581Q9P0T4 197 aa12.44□□□□□ -0.42
CHL1-202ENST00000397491 Q6ZT83 130 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms