RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 SULT1A3P0DMM9 295 aa13.43□□□□□ -0.26
FXN-203ENST00000396366 SULT1A4P0DMN0 295 aa13.43□□□□□ -0.26
FXN-203ENST00000396366 NMSQ5H8A3 153 aa13.43□□□□□ -0.26
FXN-203ENST00000396366 IL22RA2Q969J5 263 aa13.43□□□□□ -0.26
FXN-203ENST00000396366 METTL26Q96S19 204 aa13.43□□□□□ -0.26
FXN-203ENST00000396366 TRAV30A0A087WSZ9 112 aa13.42□□□□□ -0.26
FXN-203ENST00000396366 RPS10-NUDT3A0A1W2PQS6 291 aa13.42□□□□□ -0.26
FXN-203ENST00000396366 P2RY1P47900 373 aa13.42□□□□□ -0.26
FXN-203ENST00000396366 KLF9Q13886 244 aaPredicted RBP13.42□□□□□ -0.26
FXN-203ENST00000396366 STXBP6Q8NFX7 210 aa13.42□□□□□ -0.26
FXN-203ENST00000396366 RNASEH2CQ8TDP1 164 aaKnown RBP13.42□□□□□ -0.26
FXN-203ENST00000396366 RBKSQ9H477 322 aa13.42□□□□□ -0.26
FXN-203ENST00000396366 AGRNO00468 2067 aa13.41□□□□□ -0.26
FXN-203ENST00000396366 A0A1W2PS18 150 aa13.41□□□□□ -0.26
FXN-203ENST00000396366 NPY1RP25929 384 aa13.41□□□□□ -0.26
FXN-203ENST00000396366 OR10J1P30954 320 aa13.41□□□□□ -0.26
FXN-203ENST00000396366 PYDC2Q56P42 97 aa13.41□□□□□ -0.26
FXN-203ENST00000396366 OR1S2Q8NGQ3 325 aa13.41□□□□□ -0.26
FXN-203ENST00000396366 NPIPB3Q92617 1050 aa13.41□□□□□ -0.26
FXN-203ENST00000396366 SCGB3A2Q96PL1 93 aa13.41□□□□□ -0.26
FXN-203ENST00000396366 TMEM231Q9H6L2 316 aa13.41□□□□□ -0.26
FXN-203ENST00000396366 U3KQE9 123 aa13.41□□□□□ -0.26
FXN-203ENST00000396366 V9GYH0 126 aa13.41□□□□□ -0.26
FXN-203ENST00000396366 TRAV2A0A0B4J234 112 aa13.4□□□□□ -0.26
FXN-203ENST00000396366 A0A0B4J2A0 478 aa13.4□□□□□ -0.26
FXN-203ENST00000396366 K7EQG2 157 aa13.4□□□□□ -0.26
FXN-203ENST00000396366 CA1P00915 261 aaPredicted RBP13.4□□□□□ -0.26
FXN-203ENST00000396366 IFNA10P01566 189 aa13.4□□□□□ -0.26
FXN-203ENST00000396366 SLC25A4P12235 298 aa13.4□□□□□ -0.26
FXN-203ENST00000396366 SMCO1Q147U7 214 aa13.4□□□□□ -0.26
FXN-203ENST00000396366 TMED4Q7Z7H5 227 aa13.4□□□□□ -0.26
FXN-203ENST00000396366 Q8WTZ3 238 aa13.4□□□□□ -0.26
FXN-203ENST00000396366 TRIM63Q969Q1 353 aa13.4□□□□□ -0.26
FXN-203ENST00000396366 ACY3Q96HD9 319 aa13.4□□□□□ -0.26
FXN-203ENST00000396366 RARRES2Q99969 163 aa13.4□□□□□ -0.26
FXN-203ENST00000396366 HSPB7Q9UBY9 170 aa13.4□□□□□ -0.26
FXN-203ENST00000396366 SHPKQ9UHJ6 478 aa13.4□□□□□ -0.26
FXN-203ENST00000396366 SCGB2A1O75556 95 aa13.39□□□□□ -0.27
FXN-203ENST00000396366 CCR6P51684 374 aa13.39□□□□□ -0.27
FXN-203ENST00000396366 YPEL3P61236 119 aaPredicted RBP13.39□□□□□ -0.27
FXN-203ENST00000396366 USF2Q15853 346 aaPredicted RBP13.39□□□□□ -0.27
FXN-203ENST00000396366 ZNF79Q15937 498 aa13.39□□□□□ -0.27
FXN-203ENST00000396366 CEMP1Q6PRD7 247 aaPredicted RBP13.39□□□□□ -0.27
FXN-203ENST00000396366 OR11H2Q8NH07 326 aa13.39□□□□□ -0.27
FXN-203ENST00000396366 DTD1Q8TEA8 209 aa13.39□□□□□ -0.27
FXN-203ENST00000396366 DCANP1Q8TF63 244 aa13.39□□□□□ -0.27
FXN-203ENST00000396366 CCDC160A6NGH7 325 aa13.38□□□□□ -0.27
FXN-203ENST00000396366 KNCNA6PVL3 124 aa13.38□□□□□ -0.27
FXN-203ENST00000396366 DEFB4AO15263 64 aa13.38□□□□□ -0.27
FXN-203ENST00000396366 ZNF688P0C7X2 276 aa13.38□□□□□ -0.27
FXN-203ENST00000396366 C16orf54Q6UWD8 224 aa13.38□□□□□ -0.27
FXN-203ENST00000396366 LGI3Q8N145 548 aa13.38□□□□□ -0.27
FXN-203ENST00000396366 TOMM5Q8N4H5 51 aa13.38□□□□□ -0.27
FXN-203ENST00000396366 GATAD1Q8WUU5 269 aa13.38□□□□□ -0.27
FXN-203ENST00000396366 BIRC6Q9NR09 4857 aa13.38□□□□□ -0.27
FXN-203ENST00000396366 IL4P05112 153 aa13.37□□□□□ -0.27
FXN-203ENST00000396366 HNRNPCP07910 306 aaKnown RBP eCLIP13.37□□□□□ -0.27
FXN-203ENST00000396366 GIG44P09565 113 aaPredicted RBP13.37□□□□□ -0.27
FXN-203ENST00000396366 ETFRF1Q6IPR1 90 aa13.37□□□□□ -0.27
FXN-203ENST00000396366 OR1S1Q8NH92 325 aa13.37□□□□□ -0.27
FXN-203ENST00000396366 GLMPQ8WWB7 406 aa13.37□□□□□ -0.27
FXN-203ENST00000396366 LINC00476Q8WZB0 136 aa13.37□□□□□ -0.27
FXN-203ENST00000396366 NARS2Q96I59 477 aaKnown RBP13.37□□□□□ -0.27
FXN-203ENST00000396366 U3KQ87 197 aa13.37□□□□□ -0.27
FXN-203ENST00000396366 NUPR2A6NF83 97 aa13.36□□□□□ -0.27
FXN-203ENST00000396366 RD3LP0DJH9 198 aa13.36□□□□□ -0.27
FXN-203ENST00000396366 ANXA3P12429 323 aa13.36□□□□□ -0.27
FXN-203ENST00000396366 ATF4P18848 351 aaPredicted RBP13.36□□□□□ -0.27
FXN-203ENST00000396366 DHRS2Q13268 280 aa13.36□□□□□ -0.27
FXN-203ENST00000396366 TRPT1Q86TN4 253 aaKnown RBP13.36□□□□□ -0.27
FXN-203ENST00000396366 STHQ8IWL8 128 aa13.36□□□□□ -0.27
FXN-203ENST00000396366 GRAMD2BQ96HH9 432 aa13.36□□□□□ -0.27
FXN-203ENST00000396366 LY6G6CO95867 125 aa13.35□□□□□ -0.27
FXN-203ENST00000396366 TOMM40O96008 361 aa13.35□□□□□ -0.27
FXN-203ENST00000396366 PSG1P11464 419 aa13.35□□□□□ -0.27
FXN-203ENST00000396366 FAUP35544 74 aaKnown RBP13.35□□□□□ -0.27
FXN-203ENST00000396366 NANOS2P60321 138 aaKnown RBP13.35□□□□□ -0.27
FXN-203ENST00000396366 TMEM128Q5BJH2 165 aa13.35□□□□□ -0.27
FXN-203ENST00000396366 CCDC190Q86UF4 302 aa13.35□□□□□ -0.27
FXN-203ENST00000396366 NOXA1Q86UR1 476 aa13.35□□□□□ -0.27
FXN-203ENST00000396366 TMEM217Q8N7C4 229 aa13.35□□□□□ -0.27
FXN-203ENST00000396366 OR51G1Q8NGK1 321 aa13.35□□□□□ -0.27
FXN-203ENST00000396366 PHLDA1Q8WV24 401 aaPredicted RBP13.35□□□□□ -0.27
FXN-203ENST00000396366 RBM38Q9H0Z9 239 aaKnown RBP13.35□□□□□ -0.27
FXN-203ENST00000396366 CACFD1Q9UGQ2 172 aa13.35□□□□□ -0.27
FXN-203ENST00000396366 HELTA6NFD8 242 aa13.34□□□□□ -0.27
FXN-203ENST00000396366 PITX3O75364 302 aa13.34□□□□□ -0.27
FXN-203ENST00000396366 IFNA4P05014 189 aa13.34□□□□□ -0.27
FXN-203ENST00000396366 VAMP1P23763 118 aa13.34□□□□□ -0.27
FXN-203ENST00000396366 AP3S2P59780 193 aa13.34□□□□□ -0.27
FXN-203ENST00000396366 SRPXP78539 464 aa13.34□□□□□ -0.27
FXN-203ENST00000396366 GAMTQ14353 236 aa13.34□□□□□ -0.27
FXN-203ENST00000396366 ACTL10Q5JWF8 245 aa13.34□□□□□ -0.27
FXN-203ENST00000396366 IGKV1D-37A0A075B6S9 117 aa13.33□□□□□ -0.28
FXN-203ENST00000396366 BUB3O43684 328 aa13.33□□□□□ -0.28
FXN-203ENST00000396366 IAPPP10997 89 aa13.33□□□□□ -0.28
FXN-203ENST00000396366 C4BPBP20851 252 aa13.33□□□□□ -0.28
FXN-203ENST00000396366 S100A5P33763 92 aa13.33□□□□□ -0.28
FXN-203ENST00000396366 ZNF90Q03938 601 aa13.33□□□□□ -0.28
FXN-203ENST00000396366 PSMG4Q5JS54 123 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 220.5 ms