RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 IGHG4P01861 327 aa10.7□□□□□ -0.7
VAPB-202ENST00000395802 BLOC1S1P78537 153 aa10.7□□□□□ -0.7
VAPB-202ENST00000395802 CFHR3Q02985 330 aa10.7□□□□□ -0.7
VAPB-202ENST00000395802 ATP5G2Q06055 141 aa10.7□□□□□ -0.7
VAPB-202ENST00000395802 EIF4E3Q8N5X7 224 aaKnown RBP10.7□□□□□ -0.7
VAPB-202ENST00000395802 THAP8Q8NA92 274 aa10.7□□□□□ -0.7
VAPB-202ENST00000395802 LYPD6BQ8NI32 183 aa10.7□□□□□ -0.7
VAPB-202ENST00000395802 ANKRD34BA5PLL1 514 aa10.7□□□□□ -0.7
VAPB-202ENST00000395802 AGPAT2O15120 278 aa10.7□□□□□ -0.7
VAPB-202ENST00000395802 GNG7O60262 68 aa10.7□□□□□ -0.7
VAPB-202ENST00000395802 ELANEP08246 267 aa10.7□□□□□ -0.7
VAPB-202ENST00000395802 TPPP2P59282 170 aa10.7□□□□□ -0.7
VAPB-202ENST00000395802 MLANAQ16655 118 aa10.7□□□□□ -0.7
VAPB-202ENST00000395802 AKR1C8PQ5T2L2 129 aa10.7□□□□□ -0.7
VAPB-202ENST00000395802 TCRBV4S1A1TA0A5B7 111 aa10.69□□□□□ -0.7
VAPB-202ENST00000395802 NDUFB8O95169 186 aa10.69□□□□□ -0.7
VAPB-202ENST00000395802 PF4V1P10720 104 aa10.69□□□□□ -0.7
VAPB-202ENST00000395802 OR10J1P30954 320 aa10.69□□□□□ -0.7
VAPB-202ENST00000395802 RPL29P47914 159 aaKnown RBP10.69□□□□□ -0.7
VAPB-202ENST00000395802 FOXE3Q13461 319 aa10.69□□□□□ -0.7
VAPB-202ENST00000395802 Q56UQ5 140 aa10.69□□□□□ -0.7
VAPB-202ENST00000395802 DPPA3Q6W0C5 159 aa10.69□□□□□ -0.7
VAPB-202ENST00000395802 Q6ZSV7 163 aa10.69□□□□□ -0.7
VAPB-202ENST00000395802 MS4A10Q96PG2 267 aa10.69□□□□□ -0.7
VAPB-202ENST00000395802 TRGV9Q99603 122 aa10.69□□□□□ -0.7
VAPB-202ENST00000395802 TSPAN15O95858 294 aa10.68□□□□□ -0.7
VAPB-202ENST00000395802 RAB9AP51151 201 aa10.68□□□□□ -0.7
VAPB-202ENST00000395802 MGST2Q99735 147 aa10.68□□□□□ -0.7
VAPB-202ENST00000395802 HRH4Q9H3N8 390 aa10.68□□□□□ -0.7
VAPB-202ENST00000395802 C16orf95Q9H693 158 aa10.68□□□□□ -0.7
VAPB-202ENST00000395802 IGHV3-21A0A0B4J1V1 117 aa10.68□□□□□ -0.7
VAPB-202ENST00000395802 NUPL2O15504 423 aaKnown RBP10.68□□□□□ -0.7
VAPB-202ENST00000395802 NDUFA7O95182 113 aa10.68□□□□□ -0.7
VAPB-202ENST00000395802 PSMB8P28062 276 aa10.68□□□□□ -0.7
VAPB-202ENST00000395802 B2MP61769 119 aa10.68□□□□□ -0.7
VAPB-202ENST00000395802 ZNF616Q08AN1 781 aa10.68□□□□□ -0.7
VAPB-202ENST00000395802 ACOT6Q3I5F7 207 aaPredicted RBP10.68□□□□□ -0.7
VAPB-202ENST00000395802 TMEM95Q3KNT9 176 aa10.68□□□□□ -0.7
VAPB-202ENST00000395802 OR4F5Q8NH21 305 aa10.68□□□□□ -0.7
VAPB-202ENST00000395802 MARC2Q969Z3 335 aa10.68□□□□□ -0.7
VAPB-202ENST00000395802 C19orf24Q9BVV8 132 aa10.68□□□□□ -0.7
VAPB-202ENST00000395802 GGTLC1Q9BX51 225 aa10.68□□□□□ -0.7
VAPB-202ENST00000395802 SERTAD4Q9NUC0 356 aa10.68□□□□□ -0.7
VAPB-202ENST00000395802 NUDT19A8MXV4 375 aa10.67□□□□□ -0.7
VAPB-202ENST00000395802 IGHV3-48P01763 117 aa10.67□□□□□ -0.7
VAPB-202ENST00000395802 TOR2AQ5JU69 321 aa10.67□□□□□ -0.7
VAPB-202ENST00000395802 SPSB3Q6PJ21 355 aa10.67□□□□□ -0.7
VAPB-202ENST00000395802 IL34Q6ZMJ4 242 aa10.67□□□□□ -0.7
VAPB-202ENST00000395802 CYP2G1PQ6ZSU1 146 aa10.67□□□□□ -0.7
VAPB-202ENST00000395802 S100A7AQ86SG5 101 aa10.67□□□□□ -0.7
VAPB-202ENST00000395802 ZNF329Q86UD4 541 aa10.67□□□□□ -0.7
VAPB-202ENST00000395802 BPIFCQ8NFQ6 507 aa10.67□□□□□ -0.7
VAPB-202ENST00000395802 FAM213BQ8TBF2 198 aa10.67□□□□□ -0.7
VAPB-202ENST00000395802 PXMP4Q9Y6I8 212 aa10.67□□□□□ -0.7
VAPB-202ENST00000395802 IGKV1OR2-108A0A075B7D4 117 aa10.66□□□□□ -0.7
VAPB-202ENST00000395802 RAB19A4D1S5 217 aa10.66□□□□□ -0.7
VAPB-202ENST00000395802 CYSRT1A8MQ03 144 aa10.66□□□□□ -0.7
VAPB-202ENST00000395802 IGLC1P0CG04 106 aa10.66□□□□□ -0.7
VAPB-202ENST00000395802 S100A7P31151 101 aa10.66□□□□□ -0.7
VAPB-202ENST00000395802 FFAR4Q5NUL3 377 aa10.66□□□□□ -0.7
VAPB-202ENST00000395802 STPG3Q8N7X2 389 aa10.66□□□□□ -0.7
VAPB-202ENST00000395802 OR4X2Q8NGF9 303 aa10.66□□□□□ -0.7
VAPB-202ENST00000395802 ZNF502Q8TBZ5 544 aa10.66□□□□□ -0.7
VAPB-202ENST00000395802 VSIRQ9H7M9 311 aa10.66□□□□□ -0.7
VAPB-202ENST00000395802 SLC39A9Q9NUM3 307 aa10.66□□□□□ -0.7
VAPB-202ENST00000395802 SLC45A2Q9UMX9 530 aa10.66□□□□□ -0.7
VAPB-202ENST00000395802 I3L521 148 aa10.65□□□□□ -0.7
VAPB-202ENST00000395802 M6PRP20645 277 aa10.65□□□□□ -0.7
VAPB-202ENST00000395802 YPEL3P61236 119 aaPredicted RBP10.65□□□□□ -0.7
VAPB-202ENST00000395802 TMEM41BQ5BJD5 291 aa10.65□□□□□ -0.7
VAPB-202ENST00000395802 KLHDC1Q8N7A1 406 aa10.65□□□□□ -0.7
VAPB-202ENST00000395802 RNF152Q8N8N0 203 aa10.65□□□□□ -0.7
VAPB-202ENST00000395802 PFDN5Q99471 154 aa10.65□□□□□ -0.7
VAPB-202ENST00000395802 RPRMQ9NS64 109 aa10.65□□□□□ -0.7
VAPB-202ENST00000395802 FN1P02751 2386 aaKnown RBP10.65□□□□□ -0.7
VAPB-202ENST00000395802 A0A1B0GUS0 222 aa10.65□□□□□ -0.71
VAPB-202ENST00000395802 CLEC3BP05452 202 aa10.65□□□□□ -0.71
VAPB-202ENST00000395802 RD3LP0DJH9 198 aa10.65□□□□□ -0.71
VAPB-202ENST00000395802 RAB2AP61019 212 aa10.65□□□□□ -0.71
VAPB-202ENST00000395802 PRR20EP86478 221 aa10.65□□□□□ -0.71
VAPB-202ENST00000395802 PRR20CP86479 221 aa10.65□□□□□ -0.71
VAPB-202ENST00000395802 PRR20DP86480 221 aa10.65□□□□□ -0.71
VAPB-202ENST00000395802 PRR20BP86481 221 aa10.65□□□□□ -0.71
VAPB-202ENST00000395802 PRR20AP86496 221 aa10.65□□□□□ -0.71
VAPB-202ENST00000395802 RELQ04864 619 aaPredicted RBP10.65□□□□□ -0.71
VAPB-202ENST00000395802 OR1L4Q8NGR5 311 aa10.65□□□□□ -0.71
VAPB-202ENST00000395802 Q8WTZ3 238 aa10.65□□□□□ -0.71
VAPB-202ENST00000395802 MRPL36Q9P0J6 103 aaKnown RBP10.65□□□□□ -0.71
VAPB-202ENST00000395802 IGKV1D-37A0A075B6S9 117 aa10.64□□□□□ -0.71
VAPB-202ENST00000395802 ELOA3CA0A087WX78 387 aaPredicted RBP10.64□□□□□ -0.71
VAPB-202ENST00000395802 OR2T8A6NH00 312 aa10.64□□□□□ -0.71
VAPB-202ENST00000395802 ELLP55199 621 aaPredicted RBP10.64□□□□□ -0.71
VAPB-202ENST00000395802 MIC13Q5XKP0 118 aa10.64□□□□□ -0.71
VAPB-202ENST00000395802 UQCC3Q6UW78 93 aa10.64□□□□□ -0.71
VAPB-202ENST00000395802 OR51G1Q8NGK1 321 aa10.64□□□□□ -0.71
VAPB-202ENST00000395802 UBE2E2Q96LR5 201 aa10.64□□□□□ -0.71
VAPB-202ENST00000395802 RNF2Q99496 336 aa10.64□□□□□ -0.71
VAPB-202ENST00000395802 CUBNO60494 3623 aa10.64□□□□□ -0.71
VAPB-202ENST00000395802 A0A1W2PPV4 95 aa10.63□□□□□ -0.71
VAPB-202ENST00000395802 TOMM40O96008 361 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms