RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 VSIRQ9H7M9 311 aa10.2□□□□□ -0.78
CXCL12-205ENST00000395794 ZFAND3Q9H8U3 227 aa10.2□□□□□ -0.78
CXCL12-205ENST00000395794 PRR13Q9NZ81 148 aa10.2□□□□□ -0.78
CXCL12-205ENST00000395794 DFFBO76075 338 aa10.19□□□□□ -0.78
CXCL12-205ENST00000395794 EIF2B2P49770 351 aaKnown RBP10.19□□□□□ -0.78
CXCL12-205ENST00000395794 KLF9Q13886 244 aaPredicted RBP10.19□□□□□ -0.78
CXCL12-205ENST00000395794 DEFB135Q30KP9 77 aa10.19□□□□□ -0.78
CXCL12-205ENST00000395794 TIGITQ495A1 244 aa10.19□□□□□ -0.78
CXCL12-205ENST00000395794 NMSQ5H8A3 153 aa10.19□□□□□ -0.78
CXCL12-205ENST00000395794 SPANXN2Q5MJ10 180 aa10.19□□□□□ -0.78
CXCL12-205ENST00000395794 FAM90A2PQ658T7 463 aa10.19□□□□□ -0.78
CXCL12-205ENST00000395794 LYZL2Q7Z4W2 148 aa10.19□□□□□ -0.78
CXCL12-205ENST00000395794 OR1S2Q8NGQ3 325 aa10.19□□□□□ -0.78
CXCL12-205ENST00000395794 DEDD2Q8WXF8 326 aa10.19□□□□□ -0.78
CXCL12-205ENST00000395794 SLC25A21Q9BQT8 299 aaPredicted RBP10.19□□□□□ -0.78
CXCL12-205ENST00000395794 MS4A6AQ9H2W1 248 aa10.19□□□□□ -0.78
CXCL12-205ENST00000395794 MRPL36Q9P0J6 103 aaKnown RBP10.19□□□□□ -0.78
CXCL12-205ENST00000395794 U3KQ87 197 aa10.19□□□□□ -0.78
CXCL12-205ENST00000395794 TRAV2A0A0B4J234 112 aa10.18□□□□□ -0.78
CXCL12-205ENST00000395794 LCE6AA0A183 80 aa10.18□□□□□ -0.78
CXCL12-205ENST00000395794 APOHP02749 345 aaPredicted RBP10.18□□□□□ -0.78
CXCL12-205ENST00000395794 VAMP1P23763 118 aa10.18□□□□□ -0.78
CXCL12-205ENST00000395794 OR10J1P30954 320 aa10.18□□□□□ -0.78
CXCL12-205ENST00000395794 INPP1P49441 399 aa10.18□□□□□ -0.78
CXCL12-205ENST00000395794 RND2P52198 227 aa10.18□□□□□ -0.78
CXCL12-205ENST00000395794 SUPT4H1P63272 117 aaKnown RBP10.18□□□□□ -0.78
CXCL12-205ENST00000395794 TNFRSF9Q07011 255 aa10.18□□□□□ -0.78
CXCL12-205ENST00000395794 TMEM128Q5BJH2 165 aa10.18□□□□□ -0.78
CXCL12-205ENST00000395794 PRSS54Q6PEW0 395 aa10.18□□□□□ -0.78
CXCL12-205ENST00000395794 OR1S1Q8NH92 325 aa10.18□□□□□ -0.78
CXCL12-205ENST00000395794 DTD1Q8TEA8 209 aa10.18□□□□□ -0.78
CXCL12-205ENST00000395794 TRIM63Q969Q1 353 aa10.18□□□□□ -0.78
CXCL12-205ENST00000395794 MAP6D1Q9H9H5 199 aa10.18□□□□□ -0.78
CXCL12-205ENST00000395794 RABAC1Q9UI14 185 aa10.18□□□□□ -0.78
CXCL12-205ENST00000395794 V9GYH0 126 aa10.18□□□□□ -0.78
CXCL12-205ENST00000395794 DUXBA0A1W2PPF3 345 aa10.17□□□□□ -0.78
CXCL12-205ENST00000395794 MPTX1A8MV57 137 aa10.17□□□□□ -0.78
CXCL12-205ENST00000395794 ZNF701M0R085 212 aaPredicted RBP10.17□□□□□ -0.78
CXCL12-205ENST00000395794 JTBO76095 146 aa10.17□□□□□ -0.78
CXCL12-205ENST00000395794 IGKV1-17P01599 117 aa10.17□□□□□ -0.78
CXCL12-205ENST00000395794 IFNA4P05014 189 aa10.17□□□□□ -0.78
CXCL12-205ENST00000395794 CRYBB3P26998 211 aa10.17□□□□□ -0.78
CXCL12-205ENST00000395794 ATP5IP56385 69 aaPredicted RBP10.17□□□□□ -0.78
CXCL12-205ENST00000395794 TMEM217Q8N7C4 229 aa10.17□□□□□ -0.78
CXCL12-205ENST00000395794 ACY3Q96HD9 319 aa10.17□□□□□ -0.78
CXCL12-205ENST00000395794 CSTL1Q9H114 145 aa10.17□□□□□ -0.78
CXCL12-205ENST00000395794 RBKSQ9H477 322 aa10.17□□□□□ -0.78
CXCL12-205ENST00000395794 HSPB7Q9UBY9 170 aa10.17□□□□□ -0.78
CXCL12-205ENST00000395794 IGLC1P0CG04 106 aa10.16□□□□□ -0.78
CXCL12-205ENST00000395794 P2RY1P47900 373 aa10.16□□□□□ -0.78
CXCL12-205ENST00000395794 YPEL3P61236 119 aaPredicted RBP10.16□□□□□ -0.78
CXCL12-205ENST00000395794 CCDC190Q86UF4 302 aa10.16□□□□□ -0.78
CXCL12-205ENST00000395794 LILRB2Q8N423 598 aa10.16□□□□□ -0.78
CXCL12-205ENST00000395794 STXBP6Q8NFX7 210 aa10.16□□□□□ -0.78
CXCL12-205ENST00000395794 NPIPB3Q92617 1050 aa10.16□□□□□ -0.78
CXCL12-205ENST00000395794 RNF183Q96D59 192 aa10.16□□□□□ -0.78
CXCL12-205ENST00000395794 A0A0J9YWU9 116 aa10.15□□□□□ -0.78
CXCL12-205ENST00000395794 CXorf65A6NEN9 183 aa10.15□□□□□ -0.78
CXCL12-205ENST00000395794 HELTA6NFD8 242 aa10.15□□□□□ -0.78
CXCL12-205ENST00000395794 HNRNPCP07910 306 aaKnown RBP eCLIP10.15□□□□□ -0.78
CXCL12-205ENST00000395794 RD3LP0DJH9 198 aa10.15□□□□□ -0.78
CXCL12-205ENST00000395794 AP2S1P53680 142 aaPredicted RBP10.15□□□□□ -0.78
CXCL12-205ENST00000395794 DEFB131AP59861 70 aa10.15□□□□□ -0.78
CXCL12-205ENST00000395794 ZNF79Q15937 498 aa10.15□□□□□ -0.78
CXCL12-205ENST00000395794 ZNF124Q15973 351 aa10.15□□□□□ -0.78
CXCL12-205ENST00000395794 TRIQKQ629K1 86 aa10.15□□□□□ -0.78
CXCL12-205ENST00000395794 LYG2Q86SG7 212 aa10.15□□□□□ -0.78
CXCL12-205ENST00000395794 CENPSQ8N2Z9 138 aa10.15□□□□□ -0.78
CXCL12-205ENST00000395794 PFDN2Q9UHV9 154 aa10.15□□□□□ -0.78
CXCL12-205ENST00000395794 MED6O75586 246 aa10.14□□□□□ -0.79
CXCL12-205ENST00000395794 IL4P05112 153 aa10.14□□□□□ -0.79
CXCL12-205ENST00000395794 FABP1P07148 127 aa10.14□□□□□ -0.79
CXCL12-205ENST00000395794 GPX4P36969 197 aaPredicted RBP10.14□□□□□ -0.79
CXCL12-205ENST00000395794 RAB11AP62491 216 aa10.14□□□□□ -0.79
CXCL12-205ENST00000395794 RPP30P78346 268 aaKnown RBP10.14□□□□□ -0.79
CXCL12-205ENST00000395794 LEMD1Q68G75 181 aa10.14□□□□□ -0.79
CXCL12-205ENST00000395794 STHQ8IWL8 128 aa10.14□□□□□ -0.79
CXCL12-205ENST00000395794 GATAD1Q8WUU5 269 aa10.14□□□□□ -0.79
CXCL12-205ENST00000395794 TMEM170AQ8WVE7 144 aa10.14□□□□□ -0.79
CXCL12-205ENST00000395794 SLC35E1Q96K37 410 aa10.14□□□□□ -0.79
CXCL12-205ENST00000395794 RBM38Q9H0Z9 239 aaKnown RBP10.14□□□□□ -0.79
CXCL12-205ENST00000395794 TMED3Q9Y3Q3 217 aa10.14□□□□□ -0.79
CXCL12-205ENST00000395794 ZFP92A6NM28 416 aa10.13□□□□□ -0.79
CXCL12-205ENST00000395794 TOMM40O96008 361 aa10.13□□□□□ -0.79
CXCL12-205ENST00000395794 SLC25A6P12236 298 aa10.13□□□□□ -0.79
CXCL12-205ENST00000395794 RBMS2Q15434 407 aaKnown RBP10.13□□□□□ -0.79
CXCL12-205ENST00000395794 LRTM2Q8N967 370 aa10.13□□□□□ -0.79
CXCL12-205ENST00000395794 PAIP2BQ9ULR5 123 aaKnown RBP10.13□□□□□ -0.79
CXCL12-205ENST00000395794 STARD9Q9P2P6 4700 aa10.12□□□□□ -0.79
CXCL12-205ENST00000395794 CSMD3Q7Z407 3707 aa10.12□□□□□ -0.79
CXCL12-205ENST00000395794 NAP1L6A6NFF2 107 aa10.12□□□□□ -0.79
CXCL12-205ENST00000395794 CENPXA8MT69 81 aa10.12□□□□□ -0.79
CXCL12-205ENST00000395794 FAM90A26D6RGX4 464 aa10.12□□□□□ -0.79
CXCL12-205ENST00000395794 K7EQG2 157 aa10.12□□□□□ -0.79
CXCL12-205ENST00000395794 SFT2D2O95562 160 aa10.12□□□□□ -0.79
CXCL12-205ENST00000395794 CA1P00915 261 aaPredicted RBP10.12□□□□□ -0.79
CXCL12-205ENST00000395794 NUP62P37198 522 aaPredicted RBP10.12□□□□□ -0.79
CXCL12-205ENST00000395794 UBE2MP61081 183 aaKnown RBP10.12□□□□□ -0.79
CXCL12-205ENST00000395794 DHRS2Q13268 280 aa10.12□□□□□ -0.79
CXCL12-205ENST00000395794 PPP1R1AQ13522 171 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms