RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 EIF3GO75821 320 aaKnown RBP eCLIP11.96□□□□□ -0.49
SCAF11-204ENST00000395454 SNRNP70P08621 437 aaKnown RBP11.96□□□□□ -0.49
SCAF11-204ENST00000395454 AREGP15514 252 aa11.96□□□□□ -0.49
SCAF11-204ENST00000395454 MMDQ15546 238 aa11.96□□□□□ -0.49
SCAF11-204ENST00000395454 MLANAQ16655 118 aa11.96□□□□□ -0.49
SCAF11-204ENST00000395454 ETFRF1Q6IPR1 90 aa11.96□□□□□ -0.49
SCAF11-204ENST00000395454 F11RQ9Y624 299 aaKnown RBP11.96□□□□□ -0.49
SCAF11-204ENST00000395454 FCN1O00602 326 aa11.96□□□□□ -0.5
SCAF11-204ENST00000395454 TSPAN9O75954 239 aa11.96□□□□□ -0.5
SCAF11-204ENST00000395454 CXorf1O96002 111 aa11.96□□□□□ -0.5
SCAF11-204ENST00000395454 OR10J1P30954 320 aa11.96□□□□□ -0.5
SCAF11-204ENST00000395454 ABHD5Q8WTS1 349 aa11.96□□□□□ -0.5
SCAF11-204ENST00000395454 TXNDC17Q9BRA2 123 aa11.96□□□□□ -0.5
SCAF11-204ENST00000395454 NIPSNAP3BQ9BS92 247 aa11.96□□□□□ -0.5
SCAF11-204ENST00000395454 SMCO4Q9NRQ5 59 aa11.96□□□□□ -0.5
SCAF11-204ENST00000395454 IGKV1D-37A0A075B6S9 117 aa11.95□□□□□ -0.5
SCAF11-204ENST00000395454 A0A087WWC5 75 aa11.95□□□□□ -0.5
SCAF11-204ENST00000395454 OR5G3P0C626 314 aa11.95□□□□□ -0.5
SCAF11-204ENST00000395454 C5orf64Q2M2E5 130 aa11.95□□□□□ -0.5
SCAF11-204ENST00000395454 TMEM116Q8NCL8 245 aa11.95□□□□□ -0.5
SCAF11-204ENST00000395454 OR2T6Q8NHC8 308 aa11.95□□□□□ -0.5
SCAF11-204ENST00000395454 ZNF48Q96MX3 618 aaPredicted RBP11.95□□□□□ -0.5
SCAF11-204ENST00000395454 MEGF9Q9H1U4 602 aa11.95□□□□□ -0.5
SCAF11-204ENST00000395454 SEPSECSQ9HD40 501 aaKnown RBP11.95□□□□□ -0.5
SCAF11-204ENST00000395454 ARL2-SNX15V9GYD0 113 aa11.95□□□□□ -0.5
SCAF11-204ENST00000395454 TSPAN4O14817 238 aa11.94□□□□□ -0.5
SCAF11-204ENST00000395454 CRLF1O75462 422 aa11.94□□□□□ -0.5
SCAF11-204ENST00000395454 ARL14EPLP0DKL9 152 aa11.94□□□□□ -0.5
SCAF11-204ENST00000395454 CD24P25063 80 aa11.94□□□□□ -0.5
SCAF11-204ENST00000395454 PNRC1Q12796 327 aaPredicted RBP11.94□□□□□ -0.5
SCAF11-204ENST00000395454 FBLN7Q53RD9 439 aa11.94□□□□□ -0.5
SCAF11-204ENST00000395454 CYP2G1PQ6ZSU1 146 aa11.94□□□□□ -0.5
SCAF11-204ENST00000395454 TVP23CQ96ET8 276 aa11.94□□□□□ -0.5
SCAF11-204ENST00000395454 SSX3Q99909 188 aa11.94□□□□□ -0.5
SCAF11-204ENST00000395454 DMRT1Q9Y5R6 373 aa11.94□□□□□ -0.5
SCAF11-204ENST00000395454 TCRBV4S1A1TA0A5B7 111 aa11.94□□□□□ -0.5
SCAF11-204ENST00000395454 SELENOTP62341 195 aa11.94□□□□□ -0.5
SCAF11-204ENST00000395454 MRPL36Q9P0J6 103 aaKnown RBP11.94□□□□□ -0.5
SCAF11-204ENST00000395454 FUT9Q9Y231 359 aa11.94□□□□□ -0.5
SCAF11-204ENST00000395454 PUS1Q9Y606 427 aaKnown RBP eCLIP11.94□□□□□ -0.5
SCAF11-204ENST00000395454 B4DEV8 164 aa11.93□□□□□ -0.5
SCAF11-204ENST00000395454 M0R036 132 aa11.93□□□□□ -0.5
SCAF11-204ENST00000395454 REG1AP05451 166 aa11.93□□□□□ -0.5
SCAF11-204ENST00000395454 CTRB1P17538 263 aa11.93□□□□□ -0.5
SCAF11-204ENST00000395454 BRS3P32247 399 aa11.93□□□□□ -0.5
SCAF11-204ENST00000395454 CTRB2Q6GPI1 263 aa11.93□□□□□ -0.5
SCAF11-204ENST00000395454 SIGLECL1Q8N7X8 197 aa11.93□□□□□ -0.5
SCAF11-204ENST00000395454 GATAD1Q8WUU5 269 aa11.93□□□□□ -0.5
SCAF11-204ENST00000395454 RPS10P5Q9NQ39 176 aa11.93□□□□□ -0.5
SCAF11-204ENST00000395454 NF1P21359 2839 aa11.93□□□□□ -0.5
SCAF11-204ENST00000395454 H3BUX3 64 aa11.92□□□□□ -0.5
SCAF11-204ENST00000395454 PAGE4O60829 102 aa11.92□□□□□ -0.5
SCAF11-204ENST00000395454 GCHFRP30047 84 aa11.92□□□□□ -0.5
SCAF11-204ENST00000395454 GNB1P62873 340 aa11.92□□□□□ -0.5
SCAF11-204ENST00000395454 HES1Q14469 280 aa11.92□□□□□ -0.5
SCAF11-204ENST00000395454 Q6YL49 198 aa11.92□□□□□ -0.5
SCAF11-204ENST00000395454 C15orf54Q8N8G6 183 aa11.92□□□□□ -0.5
SCAF11-204ENST00000395454 ACY3Q96HD9 319 aa11.92□□□□□ -0.5
SCAF11-204ENST00000395454 RNF2Q99496 336 aa11.92□□□□□ -0.5
SCAF11-204ENST00000395454 MRPL32Q9BYC8 188 aaKnown RBP11.92□□□□□ -0.5
SCAF11-204ENST00000395454 TNFRSF19Q9NS68 423 aa11.92□□□□□ -0.5
SCAF11-204ENST00000395454 COLCA2A8K830 154 aa11.92□□□□□ -0.5
SCAF11-204ENST00000395454 PDE6DO43924 150 aa11.92□□□□□ -0.5
SCAF11-204ENST00000395454 MT-CO2P00403 227 aa11.92□□□□□ -0.5
SCAF11-204ENST00000395454 PLGLAQ15195 96 aa11.92□□□□□ -0.5
SCAF11-204ENST00000395454 SPATA31B1PQ5VZV4 182 aa11.92□□□□□ -0.5
SCAF11-204ENST00000395454 ZNF562Q6V9R5 426 aa11.92□□□□□ -0.5
SCAF11-204ENST00000395454 OR1L6Q8NGR2 347 aa11.92□□□□□ -0.5
SCAF11-204ENST00000395454 NPIPB3Q92617 1050 aa11.92□□□□□ -0.5
SCAF11-204ENST00000395454 TRGV9Q99603 122 aa11.92□□□□□ -0.5
SCAF11-204ENST00000395454 C20orf24Q9BUV8 137 aa11.92□□□□□ -0.5
SCAF11-204ENST00000395454 SDF2L1Q9HCN8 221 aa11.92□□□□□ -0.5
SCAF11-204ENST00000395454 C11orf94C9JXX5 98 aa11.91□□□□□ -0.5
SCAF11-204ENST00000395454 I3L2K1 104 aa11.91□□□□□ -0.5
SCAF11-204ENST00000395454 HOXA3O43365 443 aaPredicted RBP11.91□□□□□ -0.5
SCAF11-204ENST00000395454 IGHV4-59P01825 116 aa11.91□□□□□ -0.5
SCAF11-204ENST00000395454 IER3P46695 156 aa11.91□□□□□ -0.5
SCAF11-204ENST00000395454 RND2P52198 227 aa11.91□□□□□ -0.5
SCAF11-204ENST00000395454 TMEM37Q8WXS4 190 aa11.91□□□□□ -0.5
SCAF11-204ENST00000395454 YPEL4Q96NS1 127 aa11.91□□□□□ -0.5
SCAF11-204ENST00000395454 DUX5Q96PT3 197 aa11.91□□□□□ -0.5
SCAF11-204ENST00000395454 CLN5O75503 358 aa11.9□□□□□ -0.5
SCAF11-204ENST00000395454 FAM106CPP0CH98 169 aa11.9□□□□□ -0.5
SCAF11-204ENST00000395454 FAM78BQ5VT40 261 aa11.9□□□□□ -0.5
SCAF11-204ENST00000395454 PQLC2Q6ZP29 291 aa11.9□□□□□ -0.5
SCAF11-204ENST00000395454 PRDM13Q9H4Q3 707 aa11.9□□□□□ -0.5
SCAF11-204ENST00000395454 NPIPB5A8MRT5 1133 aa11.9□□□□□ -0.51
SCAF11-204ENST00000395454 F6UZH7 168 aa11.9□□□□□ -0.51
SCAF11-204ENST00000395454 GATA2P23769 480 aaPredicted RBP11.9□□□□□ -0.51
SCAF11-204ENST00000395454 AKR1C3P42330 323 aa11.9□□□□□ -0.51
SCAF11-204ENST00000395454 CEBPGP53567 150 aa11.9□□□□□ -0.51
SCAF11-204ENST00000395454 FXYD3Q14802 87 aa11.9□□□□□ -0.51
SCAF11-204ENST00000395454 LY6EQ16553 131 aa11.9□□□□□ -0.51
SCAF11-204ENST00000395454 MIR17HGQ75NE6 70 aa11.9□□□□□ -0.51
SCAF11-204ENST00000395454 OR4F5Q8NH21 305 aa11.9□□□□□ -0.51
SCAF11-204ENST00000395454 PIFOQ8TCI5 191 aa11.9□□□□□ -0.51
SCAF11-204ENST00000395454 ZNF418Q8TF45 676 aaPredicted RBP11.9□□□□□ -0.51
SCAF11-204ENST00000395454 MISP3Q96FF7 219 aa11.9□□□□□ -0.51
SCAF11-204ENST00000395454 OR4F4Q96R69 305 aa11.9□□□□□ -0.51
SCAF11-204ENST00000395454 PFDN5Q99471 154 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms