RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 TRAV41A0A0B4J266 112 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 PNMA8CA0A1B0GUJ8 204 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 TMEM72A0PK05 275 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 ARRDC5A6NEK1 342 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 TLCD2A6NGC4 264 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 C1orf196B1AJZ1 125 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 ZNF670-ZNF695F2Z2N8 137 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 CCDC179H3BU77 68 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 GABARAPH6UMI1 98 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 J3QRK9 145 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 M0R1X1 148 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 M0R378 163 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 COX7A2LO14548 114 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 UBFD1O14562 309 aaKnown RBP1.18□□□□□ -2.22
TRAV40-201ENST00000390467 LYZL6O75951 148 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 SNAPC5O75971 98 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 NCR2O95944 276 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 IGLV2-8P01709 118 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 IGLV3-27P01718 113 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 HLA-DQB1P01920 261 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 HIST1H1DP16402 221 aaKnown RBP1.18□□□□□ -2.22
TRAV40-201ENST00000390467 CRHBPP24387 322 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 IL3RAP26951 378 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 DAPP51397 102 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 INSL3P51460 131 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 FOXA3P55318 350 aaPredicted RBP1.18□□□□□ -2.22
TRAV40-201ENST00000390467 RBM11P57052 281 aaKnown RBP1.18□□□□□ -2.22
TRAV40-201ENST00000390467 RPL23P62829 140 aaKnown RBP1.18□□□□□ -2.22
TRAV40-201ENST00000390467 BTG2P78543 158 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 PDGFRLQ15198 375 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 SP6Q3SY56 376 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 VMA21Q3ZAQ7 101 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 TCEAL5Q5H9L2 206 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 MEIG1Q5JSS6 88 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 UBE2NLQ5JXB2 153 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 MRPL2Q5T653 305 aaKnown RBP1.18□□□□□ -2.22
TRAV40-201ENST00000390467 C1orf140Q5VVS0 124 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 EBLN2Q6P2I7 272 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 Q6ZS49 121 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 GTF2H5Q6ZYL4 71 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 KTN1-AS1Q86SY8 53 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 LINC00596Q86U02 117 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 C1orf174Q8IYL3 243 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 RPP25LQ8N5L8 163 aaKnown RBP1.18□□□□□ -2.22
TRAV40-201ENST00000390467 ZDHHC22Q8N966 263 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 ZNF555Q8NEP9 628 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 OR4S1Q8NGB4 309 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 OR5D14Q8NGL3 314 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 PPTC7Q8NI37 304 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 RPS4Y2Q8TD47 263 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 LCN9Q8WX39 176 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 MAGOHBQ96A72 148 aaKnown RBP1.18□□□□□ -2.22
TRAV40-201ENST00000390467 TOMM6Q96B49 74 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 MS4A6EQ96DS6 147 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 BORCS8Q96FH0 119 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 ABHD14BQ96IU4 210 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 C18orf15Q96N68 181 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 YPEL4Q96NS1 127 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 PEBP4Q96S96 227 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 CCL13Q99616 98 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 ADAT1Q9BUB4 502 aaKnown RBP1.18□□□□□ -2.22
TRAV40-201ENST00000390467 GGTLC1Q9BX51 225 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 WDR61Q9GZS3 305 aaKnown RBP1.18□□□□□ -2.22
TRAV40-201ENST00000390467 TMEM191AQ9H0A3 160 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 MED28Q9H204 178 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 PRO1933Q9H354 126 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 C11orf68Q9H3H3 251 aaKnown RBP1.18□□□□□ -2.22
TRAV40-201ENST00000390467 Q9H521 79 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 RNF122Q9H9V4 155 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 CBLN4Q9NTU7 201 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 FAM49BQ9NUQ9 324 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 MED9Q9NWA0 146 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 AK3Q9UIJ7 227 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 IER3IP1Q9Y5U9 82 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 ZNF706Q9Y5V0 76 aaPredicted RBP1.18□□□□□ -2.22
TRAV40-201ENST00000390467 SOX21Q9Y651 276 aaPredicted RBP1.18□□□□□ -2.22
TRAV40-201ENST00000390467 LOXHD1Q8IVV2 1947 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 ZFYVE16Q7Z3T8 1539 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 KDM5DQ9BY66 1539 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 NISCHQ9Y2I1 1504 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 PLXNB1O43157 2135 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 ADGRL1O94910 1474 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 ADGRL2O95490 1459 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 PZPP20742 1482 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 NEO1Q92859 1461 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 KIAA1551Q9HCM1 1747 aa1.18□□□□□ -2.22
TRAV40-201ENST00000390467 REREQ9P2R6 1566 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 PSME4Q14997 1843 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 ATRNO75882 1429 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 CPSF1Q10570 1443 aaKnown RBP1.17□□□□□ -2.22
TRAV40-201ENST00000390467 TROQ12816 1431 aaPredicted RBP1.17□□□□□ -2.22
TRAV40-201ENST00000390467 MYOM3Q5VTT5 1437 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 FMN1Q68DA7 1419 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 POLEQ07864 2286 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 AKAP12Q02952 1782 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 TRAV9-1A0A075B6T8 112 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 A0A087X0T9 212 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 IGKV1D-43A0A0B4J1Z2 117 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 IGHV1-58A0A0C4DH39 117 aa1.17□□□□□ -2.22
TRAV40-201ENST00000390467 A0A0G2JMM0 328 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms