RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 SEC22CQ9BRL7 303 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 SHANK2-AS3Q9BTD1 123 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 C20orf27Q9GZN8 174 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 WDR61Q9GZS3 305 aaKnown RBP4.38□□□□□ -1.71
TRAV35-201ENST00000390462 TPT1P8Q9HAU6 139 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 C21orf62Q9NYP8 219 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 MED11Q9P086 117 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 HELZP42694 1942 aaKnown RBP4.38□□□□□ -1.71
TRAV35-201ENST00000390462 PCDH15Q96QU1 1955 aa4.38□□□□□ -1.71
TRAV35-201ENST00000390462 PLXND1Q9Y4D7 1925 aa4.37□□□□□ -1.71
TRAV35-201ENST00000390462 IGHV3OR15-7A0A075B7D8 119 aa4.37□□□□□ -1.71
TRAV35-201ENST00000390462 IGHV3-43A0A0B4J1X8 118 aa4.37□□□□□ -1.71
TRAV35-201ENST00000390462 OR5H14A6NHG9 310 aa4.37□□□□□ -1.71
TRAV35-201ENST00000390462 RIIAD1A6NNX1 92 aa4.37□□□□□ -1.71
TRAV35-201ENST00000390462 DEGS1O15121 323 aa4.37□□□□□ -1.71
TRAV35-201ENST00000390462 CST8O60676 142 aa4.37□□□□□ -1.71
TRAV35-201ENST00000390462 IFNA7P01567 189 aa4.37□□□□□ -1.71
TRAV35-201ENST00000390462 CD7P09564 240 aa4.37□□□□□ -1.71
TRAV35-201ENST00000390462 RPS4Y1P22090 263 aaKnown RBP4.37□□□□□ -1.71
TRAV35-201ENST00000390462 FGF12P61328 243 aa4.37□□□□□ -1.71
TRAV35-201ENST00000390462 BSPH1Q075Z2 132 aa4.37□□□□□ -1.71
TRAV35-201ENST00000390462 SYCNQ0VAF6 134 aa4.37□□□□□ -1.71
TRAV35-201ENST00000390462 LTC4SQ16873 150 aa4.37□□□□□ -1.71
TRAV35-201ENST00000390462 SCGB2B2Q4G0G5 96 aa4.37□□□□□ -1.71
TRAV35-201ENST00000390462 RPL13AP3Q6NVV1 102 aa4.37□□□□□ -1.71
TRAV35-201ENST00000390462 WDR59Q6PJI9 974 aa4.37□□□□□ -1.71
TRAV35-201ENST00000390462 THEM6Q8WUY1 208 aa4.37□□□□□ -1.71
TRAV35-201ENST00000390462 ITLN2Q8WWU7 325 aaPredicted RBP4.37□□□□□ -1.71
TRAV35-201ENST00000390462 SLC7A6Q92536 515 aa4.37□□□□□ -1.71
TRAV35-201ENST00000390462 B9D2Q9BPU9 175 aa4.37□□□□□ -1.71
TRAV35-201ENST00000390462 C11orf68Q9H3H3 251 aaKnown RBP4.37□□□□□ -1.71
TRAV35-201ENST00000390462 ZNRD1Q9P1U0 126 aa4.37□□□□□ -1.71
TRAV35-201ENST00000390462 PTPRJQ12913 1337 aa4.37□□□□□ -1.71
TRAV35-201ENST00000390462 MGAQ8IWI9 3026 aa4.37□□□□□ -1.71
TRAV35-201ENST00000390462 RELNP78509 3460 aa4.37□□□□□ -1.71
TRAV35-201ENST00000390462 ZNF638Q14966 1978 aaKnown RBP4.36□□□□□ -1.71
TRAV35-201ENST00000390462 TRBV20OR9-2A0A075B6H5 130 aa4.36□□□□□ -1.71
TRAV35-201ENST00000390462 A0A087WX48 190 aa4.36□□□□□ -1.71
TRAV35-201ENST00000390462 TMEM223A0PJW6 202 aa4.36□□□□□ -1.71
TRAV35-201ENST00000390462 IZUMO1RA6ND01 250 aa4.36□□□□□ -1.71
TRAV35-201ENST00000390462 CLDN25C9JDP6 229 aa4.36□□□□□ -1.71
TRAV35-201ENST00000390462 C11orf94C9JXX5 98 aa4.36□□□□□ -1.71
TRAV35-201ENST00000390462 OR2J2O76002 312 aa4.36□□□□□ -1.71
TRAV35-201ENST00000390462 HLA-DQB1P01920 261 aa4.36□□□□□ -1.71
TRAV35-201ENST00000390462 INAFM2P0DMQ5 153 aa4.36□□□□□ -1.71
TRAV35-201ENST00000390462 COX4I1P13073 169 aa4.36□□□□□ -1.71
TRAV35-201ENST00000390462 TBPL1P62380 186 aa4.36□□□□□ -1.71
TRAV35-201ENST00000390462 SP6Q3SY56 376 aa4.36□□□□□ -1.71
TRAV35-201ENST00000390462 Q6Q795 121 aa4.36□□□□□ -1.71
TRAV35-201ENST00000390462 ANGPTL5Q86XS5 388 aa4.36□□□□□ -1.71
TRAV35-201ENST00000390462 OR9A2Q8NGT5 310 aa4.36□□□□□ -1.71
TRAV35-201ENST00000390462 LMX1AQ8TE12 382 aa4.36□□□□□ -1.71
TRAV35-201ENST00000390462 OR5P3Q8WZ94 311 aa4.36□□□□□ -1.71
TRAV35-201ENST00000390462 RMI2Q96E14 147 aa4.36□□□□□ -1.71
TRAV35-201ENST00000390462 TBL1YQ9BQ87 522 aa4.36□□□□□ -1.71
TRAV35-201ENST00000390462 DOHHQ9BU89 302 aa4.36□□□□□ -1.71
TRAV35-201ENST00000390462 PLA2G12AQ9BZM1 189 aa4.36□□□□□ -1.71
TRAV35-201ENST00000390462 TVP23BQ9NYZ1 205 aa4.36□□□□□ -1.71
TRAV35-201ENST00000390462 PRSS21Q9Y6M0 314 aa4.36□□□□□ -1.71
TRAV35-201ENST00000390462 YLPM1P49750 1951 aaKnown RBP4.36□□□□□ -1.71
TRAV35-201ENST00000390462 TRIP11Q15643 1979 aa4.36□□□□□ -1.71
TRAV35-201ENST00000390462 ABCA12Q86UK0 2595 aa4.36□□□□□ -1.71
TRAV35-201ENST00000390462 UBR5O95071 2799 aaPredicted RBP4.36□□□□□ -1.71
TRAV35-201ENST00000390462 DENND4CQ5VZ89 1909 aa4.35□□□□□ -1.71
TRAV35-201ENST00000390462 MIF4GDA9UHW6 222 aaKnown RBP4.35□□□□□ -1.71
TRAV35-201ENST00000390462 CCL16O15467 120 aa4.35□□□□□ -1.71
TRAV35-201ENST00000390462 BANF1O75531 89 aa4.35□□□□□ -1.71
TRAV35-201ENST00000390462 CD28P10747 220 aa4.35□□□□□ -1.71
TRAV35-201ENST00000390462 ZNF32P17041 273 aa4.35□□□□□ -1.71
TRAV35-201ENST00000390462 BLVRBP30043 206 aaPredicted RBP4.35□□□□□ -1.71
TRAV35-201ENST00000390462 TGFBR1P36897 503 aa4.35□□□□□ -1.71
TRAV35-201ENST00000390462 RPS28P62857 69 aaKnown RBP4.35□□□□□ -1.71
TRAV35-201ENST00000390462 GNB2P62879 340 aa4.35□□□□□ -1.71
TRAV35-201ENST00000390462 OR8B8Q15620 311 aa4.35□□□□□ -1.71
TRAV35-201ENST00000390462 DNAJC9Q8WXX5 260 aa4.35□□□□□ -1.71
TRAV35-201ENST00000390462 L3HYPDHQ96EM0 354 aa4.35□□□□□ -1.71
TRAV35-201ENST00000390462 IMMP1LQ96LU5 166 aa4.35□□□□□ -1.71
TRAV35-201ENST00000390462 ZNF222Q9UK12 451 aa4.35□□□□□ -1.71
TRAV35-201ENST00000390462 COL1A2P08123 1366 aa4.35□□□□□ -1.71
TRAV35-201ENST00000390462 C2CD3Q4AC94 2353 aa4.35□□□□□ -1.71
TRAV35-201ENST00000390462 MYLKQ15746 1914 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 TP53BP1Q12888 1972 aaPredicted RBP4.34□□□□□ -1.71
TRAV35-201ENST00000390462 TRAV9-1A0A075B6T8 112 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 A0A087WYN8 130 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 IGHV1-3A0A0C4DH29 117 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 DPRXA6NFQ7 191 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 LINC00587B1AMM8 73 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 J3KT08 172 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 K7EP13 123 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 SULT1C4O75897 302 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 PIAS1O75925 651 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 APOC1P02654 83 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 ADRA2AP08913 450 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 OR5AC1P0C628 307 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 RPL7P18124 248 aaKnown RBP4.34□□□□□ -1.71
TRAV35-201ENST00000390462 SDC4P31431 198 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 OPRK1P41145 380 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 SERPINB10P48595 397 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 HBA1P69905 142 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 SCXQ7RTU7 201 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms