RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 LGALS9O00182 355 aa11.82□□□□□ -0.52
PDGFB-202ENST00000381551 OVOL1O14753 267 aa11.82□□□□□ -0.52
PDGFB-202ENST00000381551 CD33P20138 364 aa11.82□□□□□ -0.52
PDGFB-202ENST00000381551 DLK1P80370 383 aa11.82□□□□□ -0.52
PDGFB-202ENST00000381551 NHLH2Q02577 135 aa11.82□□□□□ -0.52
PDGFB-202ENST00000381551 FAM106AQ4KMX7 169 aa11.82□□□□□ -0.52
PDGFB-202ENST00000381551 STX12Q86Y82 276 aa11.82□□□□□ -0.52
PDGFB-202ENST00000381551 C1QL4Q86Z23 238 aa11.82□□□□□ -0.52
PDGFB-202ENST00000381551 TMEM217Q8N7C4 229 aa11.82□□□□□ -0.52
PDGFB-202ENST00000381551 OR2T35Q8NGX2 323 aa11.82□□□□□ -0.52
PDGFB-202ENST00000381551 SLC25A31Q9H0C2 315 aa11.82□□□□□ -0.52
PDGFB-202ENST00000381551 IGKV1D-37A0A075B6S9 117 aa11.81□□□□□ -0.52
PDGFB-202ENST00000381551 IGKV1OR2-108A0A075B7D4 117 aa11.81□□□□□ -0.52
PDGFB-202ENST00000381551 A0A1B0GVG6 124 aa11.81□□□□□ -0.52
PDGFB-202ENST00000381551 FNDC10F2Z333 226 aa11.81□□□□□ -0.52
PDGFB-202ENST00000381551 G3V3Q6 166 aa11.81□□□□□ -0.52
PDGFB-202ENST00000381551 NDUFA4O00483 81 aa11.81□□□□□ -0.52
PDGFB-202ENST00000381551 SCAF4O95104 1147 aaKnown RBP11.81□□□□□ -0.52
PDGFB-202ENST00000381551 OR10J1P30954 320 aa11.81□□□□□ -0.52
PDGFB-202ENST00000381551 S100A11P31949 105 aa11.81□□□□□ -0.52
PDGFB-202ENST00000381551 EWSR1Q01844 656 aaKnown RBP eCLIP11.81□□□□□ -0.52
PDGFB-202ENST00000381551 RELQ04864 619 aaPredicted RBP11.81□□□□□ -0.52
PDGFB-202ENST00000381551 TIGITQ495A1 244 aa11.81□□□□□ -0.52
PDGFB-202ENST00000381551 UNQ9165/PRO28630Q6UXU0 137 aa11.81□□□□□ -0.52
PDGFB-202ENST00000381551 THAP8Q8NA92 274 aa11.81□□□□□ -0.52
PDGFB-202ENST00000381551 OR1S2Q8NGQ3 325 aa11.81□□□□□ -0.52
PDGFB-202ENST00000381551 NPVFQ9HCQ7 196 aa11.81□□□□□ -0.52
PDGFB-202ENST00000381551 NBEAL1Q6ZS30 2694 aa11.8□□□□□ -0.52
PDGFB-202ENST00000381551 hCG_2014768A0A024R1R8 64 aa11.8□□□□□ -0.52
PDGFB-202ENST00000381551 ZNF320A2RRD8 509 aa11.8□□□□□ -0.52
PDGFB-202ENST00000381551 RPL12P30050 165 aaKnown RBP11.8□□□□□ -0.52
PDGFB-202ENST00000381551 YPEL3P61236 119 aaPredicted RBP11.8□□□□□ -0.52
PDGFB-202ENST00000381551 SLC38A11Q08AI6 406 aa11.8□□□□□ -0.52
PDGFB-202ENST00000381551 TOMM20LQ6UXN7 152 aa11.8□□□□□ -0.52
PDGFB-202ENST00000381551 IL34Q6ZMJ4 242 aa11.8□□□□□ -0.52
PDGFB-202ENST00000381551 ZNF600Q6ZNG1 722 aa11.8□□□□□ -0.52
PDGFB-202ENST00000381551 REC114Q7Z4M0 266 aa11.8□□□□□ -0.52
PDGFB-202ENST00000381551 TMEM144Q7Z5S9 345 aa11.8□□□□□ -0.52
PDGFB-202ENST00000381551 OR9G4Q8NGQ1 327 aa11.8□□□□□ -0.52
PDGFB-202ENST00000381551 ZFP92A6NM28 416 aa11.79□□□□□ -0.52
PDGFB-202ENST00000381551 SCGB2A1O75556 95 aa11.79□□□□□ -0.52
PDGFB-202ENST00000381551 HBG1P69891 147 aa11.79□□□□□ -0.52
PDGFB-202ENST00000381551 HBG2P69892 147 aa11.79□□□□□ -0.52
PDGFB-202ENST00000381551 BAXQ07812 192 aa11.79□□□□□ -0.52
PDGFB-202ENST00000381551 ATP6V1FQ16864 119 aa11.79□□□□□ -0.52
PDGFB-202ENST00000381551 TMEM190Q8WZ59 177 aa11.79□□□□□ -0.52
PDGFB-202ENST00000381551 RCC1LQ96I51 464 aaKnown RBP11.79□□□□□ -0.52
PDGFB-202ENST00000381551 SMCO3A2RU48 225 aa11.78□□□□□ -0.52
PDGFB-202ENST00000381551 SMLR1H3BR10 107 aa11.78□□□□□ -0.52
PDGFB-202ENST00000381551 YIF1AO95070 293 aa11.78□□□□□ -0.52
PDGFB-202ENST00000381551 IGLL1P15814 213 aa11.78□□□□□ -0.52
PDGFB-202ENST00000381551 ZNF90Q03938 601 aa11.78□□□□□ -0.52
PDGFB-202ENST00000381551 AKR1C1Q04828 323 aa11.78□□□□□ -0.52
PDGFB-202ENST00000381551 VWC2Q2TAL6 325 aa11.78□□□□□ -0.52
PDGFB-202ENST00000381551 OR5C1Q8NGR4 320 aa11.78□□□□□ -0.52
PDGFB-202ENST00000381551 Q8WTZ3 238 aa11.78□□□□□ -0.52
PDGFB-202ENST00000381551 ST6GAL2Q96JF0 529 aa11.78□□□□□ -0.52
PDGFB-202ENST00000381551 TRGV9Q99603 122 aa11.78□□□□□ -0.52
PDGFB-202ENST00000381551 MCRIP2Q9BUT9 160 aaKnown RBP11.78□□□□□ -0.52
PDGFB-202ENST00000381551 PEMTQ9UBM1 199 aa11.78□□□□□ -0.52
PDGFB-202ENST00000381551 PUS1Q9Y606 427 aaKnown RBP eCLIP11.78□□□□□ -0.52
PDGFB-202ENST00000381551 NOTCH3Q9UM47 2321 aa11.77□□□□□ -0.52
PDGFB-202ENST00000381551 A8MWP6 167 aa11.77□□□□□ -0.53
PDGFB-202ENST00000381551 SEC14L6B5MCN3 397 aa11.77□□□□□ -0.53
PDGFB-202ENST00000381551 K7EMT4 169 aa11.77□□□□□ -0.53
PDGFB-202ENST00000381551 TOMM40O96008 361 aa11.77□□□□□ -0.53
PDGFB-202ENST00000381551 CSN3P07498 182 aa11.77□□□□□ -0.53
PDGFB-202ENST00000381551 RD3LP0DJH9 198 aa11.77□□□□□ -0.53
PDGFB-202ENST00000381551 PSG1P11464 419 aa11.77□□□□□ -0.53
PDGFB-202ENST00000381551 ELLP55199 621 aaPredicted RBP11.77□□□□□ -0.53
PDGFB-202ENST00000381551 TM4SF20Q53R12 229 aa11.77□□□□□ -0.53
PDGFB-202ENST00000381551 ZNF546Q86UE3 836 aa11.77□□□□□ -0.53
PDGFB-202ENST00000381551 C20orf24Q9BUV8 137 aa11.77□□□□□ -0.53
PDGFB-202ENST00000381551 ELOVL1Q9BW60 279 aa11.77□□□□□ -0.53
PDGFB-202ENST00000381551 ZFAND3Q9H8U3 227 aa11.77□□□□□ -0.53
PDGFB-202ENST00000381551 UQCC1Q9NVA1 299 aa11.77□□□□□ -0.53
PDGFB-202ENST00000381551 UFC1Q9Y3C8 167 aa11.77□□□□□ -0.53
PDGFB-202ENST00000381551 LSM4Q9Y4Z0 139 aaKnown RBP11.77□□□□□ -0.53
PDGFB-202ENST00000381551 HSPB11Q9Y547 144 aa11.77□□□□□ -0.53
PDGFB-202ENST00000381551 IGHV3OR16-8A0A075B7F1 116 aa11.76□□□□□ -0.53
PDGFB-202ENST00000381551 TMEM213A2RRL7 107 aa11.76□□□□□ -0.53
PDGFB-202ENST00000381551 C2orf70A6NJV1 201 aa11.76□□□□□ -0.53
PDGFB-202ENST00000381551 C8orf88P0DMB2 117 aa11.76□□□□□ -0.53
PDGFB-202ENST00000381551 CBLN1P23435 193 aa11.76□□□□□ -0.53
PDGFB-202ENST00000381551 TEPPQ6URK8 271 aa11.76□□□□□ -0.53
PDGFB-202ENST00000381551 ADAMTSL5Q6ZMM2 481 aa11.76□□□□□ -0.53
PDGFB-202ENST00000381551 TMEM182Q6ZP80 229 aaPredicted RBP11.76□□□□□ -0.53
PDGFB-202ENST00000381551 LILRB2Q8N423 598 aa11.76□□□□□ -0.53
PDGFB-202ENST00000381551 AQP10Q96PS8 301 aa11.76□□□□□ -0.53
PDGFB-202ENST00000381551 TMEM147Q9BVK8 224 aa11.76□□□□□ -0.53
PDGFB-202ENST00000381551 SIGLEC8Q9NYZ4 499 aa11.76□□□□□ -0.53
PDGFB-202ENST00000381551 TNFSF18Q9UNG2 199 aa11.76□□□□□ -0.53
PDGFB-202ENST00000381551 FXYD6-FXYD2A0A087WZ82 144 aa11.75□□□□□ -0.53
PDGFB-202ENST00000381551 FABP1P07148 127 aa11.75□□□□□ -0.53
PDGFB-202ENST00000381551 FOLR2P14207 255 aa11.75□□□□□ -0.53
PDGFB-202ENST00000381551 EDN2P20800 178 aa11.75□□□□□ -0.53
PDGFB-202ENST00000381551 OXLD1Q5BKU9 147 aa11.75□□□□□ -0.53
PDGFB-202ENST00000381551 C9orf66Q5T8R8 295 aa11.75□□□□□ -0.53
PDGFB-202ENST00000381551 DAZ1Q9NQZ3 744 aaKnown RBP11.75□□□□□ -0.53
PDGFB-202ENST00000381551 MRPL27Q9P0M9 148 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms