RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 IFITM10A6NMD0 228 aa17.25■□□□□ 0.35
TRIM54-202ENST00000380075 COX7A1P24310 79 aa17.25■□□□□ 0.35
TRIM54-202ENST00000380075 OR10G8Q8NGN5 311 aa17.25■□□□□ 0.35
TRIM54-202ENST00000380075 OR1P1Q8NH06 330 aa17.25■□□□□ 0.35
TRIM54-202ENST00000380075 ITPR2Q14571 2701 aa17.24■□□□□ 0.35
TRIM54-202ENST00000380075 PPP1R27Q86WC6 154 aa17.24■□□□□ 0.35
TRIM54-202ENST00000380075 SRSF8Q9BRL6 282 aaKnown RBP17.24■□□□□ 0.35
TRIM54-202ENST00000380075 ONECUT1Q9UBC0 465 aa17.24■□□□□ 0.35
TRIM54-202ENST00000380075 SPG11Q96JI7 2443 aa17.24■□□□□ 0.35
TRIM54-202ENST00000380075 IGKV1D-37A0A075B6S9 117 aa17.24■□□□□ 0.35
TRIM54-202ENST00000380075 PGPEP1LA6NFU8 196 aa17.24■□□□□ 0.35
TRIM54-202ENST00000380075 M0R1W7 72 aa17.24■□□□□ 0.35
TRIM54-202ENST00000380075 ACTL10Q5JWF8 245 aa17.24■□□□□ 0.35
TRIM54-202ENST00000380075 C10orf113Q5VZT2 155 aa17.24■□□□□ 0.35
TRIM54-202ENST00000380075 EAF1Q96JC9 268 aaPredicted RBP17.24■□□□□ 0.35
TRIM54-202ENST00000380075 FAM167A-AS1Q96KT0 104 aa17.24■□□□□ 0.35
TRIM54-202ENST00000380075 DTX2Q86UW9 622 aa17.23■□□□□ 0.35
TRIM54-202ENST00000380075 OR11H6Q8NGC7 330 aa17.23■□□□□ 0.35
TRIM54-202ENST00000380075 TRGV9Q99603 122 aa17.23■□□□□ 0.35
TRIM54-202ENST00000380075 SLC25A2Q9BXI2 301 aa17.23■□□□□ 0.35
TRIM54-202ENST00000380075 AURKAIP1Q9NWT8 199 aaPredicted RBP17.23■□□□□ 0.35
TRIM54-202ENST00000380075 POLQO75417 2590 aa17.23■□□□□ 0.35
TRIM54-202ENST00000380075 HELTA6NFD8 242 aa17.22■□□□□ 0.35
TRIM54-202ENST00000380075 C22orf46C9J442 243 aa17.22■□□□□ 0.35
TRIM54-202ENST00000380075 COA6Q5JTJ3 125 aaKnown RBP17.22■□□□□ 0.35
TRIM54-202ENST00000380075 NIT2Q9NQR4 276 aa17.22■□□□□ 0.35
TRIM54-202ENST00000380075 UBE2L3P68036 154 aaKnown RBP17.22■□□□□ 0.35
TRIM54-202ENST00000380075 TPTE2P1Q5T6R2 138 aa17.22■□□□□ 0.35
TRIM54-202ENST00000380075 TMEM116Q8NCL8 245 aa17.22■□□□□ 0.35
TRIM54-202ENST00000380075 SGMS2Q8NHU3 365 aa17.22■□□□□ 0.35
TRIM54-202ENST00000380075 REG1AP05451 166 aa17.21■□□□□ 0.35
TRIM54-202ENST00000380075 CNTFRP26992 372 aa17.21■□□□□ 0.35
TRIM54-202ENST00000380075 CEACAM3P40198 252 aa17.21■□□□□ 0.35
TRIM54-202ENST00000380075 GNG4P50150 75 aa17.21■□□□□ 0.35
TRIM54-202ENST00000380075 SSBP2P81877 361 aaPredicted RBP17.21■□□□□ 0.35
TRIM54-202ENST00000380075 TMEM183AQ8IXX5 376 aa17.21■□□□□ 0.35
TRIM54-202ENST00000380075 STXBP6Q8NFX7 210 aa17.21■□□□□ 0.35
TRIM54-202ENST00000380075 OR5AU1Q8NGC0 362 aa17.21■□□□□ 0.35
TRIM54-202ENST00000380075 MISP3Q96FF7 219 aa17.21■□□□□ 0.35
TRIM54-202ENST00000380075 F11RQ9Y624 299 aaKnown RBP17.21■□□□□ 0.35
TRIM54-202ENST00000380075 GGTLC3B5MD39 225 aa17.2■□□□□ 0.34
TRIM54-202ENST00000380075 CRYBB3P26998 211 aa17.2■□□□□ 0.34
TRIM54-202ENST00000380075 HTR1DP28221 377 aa17.2■□□□□ 0.34
TRIM54-202ENST00000380075 DLX1P56177 255 aa17.2■□□□□ 0.34
TRIM54-202ENST00000380075 SSBP3Q9BWW4 388 aaPredicted RBP17.2■□□□□ 0.34
TRIM54-202ENST00000380075 TNFRSF19Q9NS68 423 aa17.2■□□□□ 0.34
TRIM54-202ENST00000380075 ZNF355PQ9NSJ1 428 aa17.2■□□□□ 0.34
TRIM54-202ENST00000380075 DPM3Q9P2X0 92 aa17.2■□□□□ 0.34
TRIM54-202ENST00000380075 SETXQ7Z333 2677 aaKnown RBP17.2■□□□□ 0.34
TRIM54-202ENST00000380075 OR10J4P0C629 311 aa17.2■□□□□ 0.34
TRIM54-202ENST00000380075 ZNF90Q03938 601 aa17.2■□□□□ 0.34
TRIM54-202ENST00000380075 CLEC12BQ2HXU8 276 aa17.2■□□□□ 0.34
TRIM54-202ENST00000380075 HCP5Q6MZN7 132 aa17.2■□□□□ 0.34
TRIM54-202ENST00000380075 GPR61Q9BZJ8 451 aa17.2■□□□□ 0.34
TRIM54-202ENST00000380075 OR51M1Q9H341 326 aa17.2■□□□□ 0.34
TRIM54-202ENST00000380075 IL36BQ9NZH7 164 aa17.2■□□□□ 0.34
TRIM54-202ENST00000380075 LOC105371242A0A075B767 164 aa17.19■□□□□ 0.34
TRIM54-202ENST00000380075 A0A0U1RQK1 487 aa17.19■□□□□ 0.34
TRIM54-202ENST00000380075 ZNF320A2RRD8 509 aa17.19■□□□□ 0.34
TRIM54-202ENST00000380075 TEX22C9J3V5 150 aa17.19■□□□□ 0.34
TRIM54-202ENST00000380075 K7EN84 100 aa17.19■□□□□ 0.34
TRIM54-202ENST00000380075 PATE2Q6UY27 113 aa17.19■□□□□ 0.34
TRIM54-202ENST00000380075 IGFBPL1Q8WX77 278 aa17.19■□□□□ 0.34
TRIM54-202ENST00000380075 PERPQ96FX8 193 aa17.19■□□□□ 0.34
TRIM54-202ENST00000380075 CCL19Q99731 98 aa17.19■□□□□ 0.34
TRIM54-202ENST00000380075 PAXXQ9BUH6 204 aa17.19■□□□□ 0.34
TRIM54-202ENST00000380075 MRPL36Q9P0J6 103 aaKnown RBP17.19■□□□□ 0.34
TRIM54-202ENST00000380075 MFAP2P55001 183 aa17.19■□□□□ 0.34
TRIM54-202ENST00000380075 SUMO1P63165 101 aaKnown RBP17.19■□□□□ 0.34
TRIM54-202ENST00000380075 TIGITQ495A1 244 aa17.19■□□□□ 0.34
TRIM54-202ENST00000380075 CENPWQ5EE01 88 aa17.19■□□□□ 0.34
TRIM54-202ENST00000380075 PRTN3P24158 256 aa17.18■□□□□ 0.34
TRIM54-202ENST00000380075 RPL15P61313 204 aaKnown RBP17.18■□□□□ 0.34
TRIM54-202ENST00000380075 GFI1BQ5VTD9 330 aa17.18■□□□□ 0.34
TRIM54-202ENST00000380075 SRSF12Q8WXF0 261 aaKnown RBP17.18■□□□□ 0.34
TRIM54-202ENST00000380075 FBXL15Q9H469 300 aa17.18■□□□□ 0.34
TRIM54-202ENST00000380075 MALRD1Q5VYJ5 2156 aa17.17■□□□□ 0.34
TRIM54-202ENST00000380075 PDLIM4P50479 330 aa17.17■□□□□ 0.34
TRIM54-202ENST00000380075 TAS2R60P59551 318 aa17.17■□□□□ 0.34
TRIM54-202ENST00000380075 DNLZQ5SXM8 178 aa17.17■□□□□ 0.34
TRIM54-202ENST00000380075 MORN5Q5VZ52 161 aa17.17■□□□□ 0.34
TRIM54-202ENST00000380075 C1orf122Q6ZSJ8 110 aa17.17■□□□□ 0.34
TRIM54-202ENST00000380075 TRAV5A0A0B4J249 113 aa17.17■□□□□ 0.34
TRIM54-202ENST00000380075 TIMM23O14925 209 aa17.17■□□□□ 0.34
TRIM54-202ENST00000380075 LY6HO94772 140 aa17.17■□□□□ 0.34
TRIM54-202ENST00000380075 HNF1AP20823 631 aa17.17■□□□□ 0.34
TRIM54-202ENST00000380075 CDKN1AP38936 164 aa17.17■□□□□ 0.34
TRIM54-202ENST00000380075 PLP1P60201 277 aa17.17■□□□□ 0.34
TRIM54-202ENST00000380075 PRB3Q04118 309 aaPredicted RBP17.17■□□□□ 0.34
TRIM54-202ENST00000380075 PLGLAQ15195 96 aa17.17■□□□□ 0.34
TRIM54-202ENST00000380075 KIR3DL3Q8N743 410 aa17.17■□□□□ 0.34
TRIM54-202ENST00000380075 OR10D4PQ8NGN7 298 aa17.17■□□□□ 0.34
TRIM54-202ENST00000380075 ODF3BA8MYP8 253 aa17.16■□□□□ 0.34
TRIM54-202ENST00000380075 IGHV3-48P01763 117 aa17.16■□□□□ 0.34
TRIM54-202ENST00000380075 ARF6P62330 175 aa17.16■□□□□ 0.34
TRIM54-202ENST00000380075 LINC00305Q7Z4B0 112 aa17.16■□□□□ 0.34
TRIM54-202ENST00000380075 OSTCQ9NRP0 149 aa17.16■□□□□ 0.34
TRIM54-202ENST00000380075 XKRY2A2RUG3 117 aa17.15■□□□□ 0.34
TRIM54-202ENST00000380075 ERVFC1-1P60608 527 aa17.15■□□□□ 0.34
TRIM54-202ENST00000380075 RPL19P84098 196 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms