RNA–Protein interactions for RNA: ENST00000379472.4

KCNC1-202, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 1 (best) BASIC

Gene KCNC1, Length 7,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-202ENST00000379472 LINC00312Q9Y6C7 94 aa13.37□□□□□ -0.27
KCNC1-202ENST00000379472 KIAA1551Q9HCM1 1747 aa13.36□□□□□ -0.27
KCNC1-202ENST00000379472 IGHV2OR16-5A0A0B4J2B6 119 aa13.36□□□□□ -0.27
KCNC1-202ENST00000379472 TEX38Q6PEX7 206 aa13.36□□□□□ -0.27
KCNC1-202ENST00000379472 GAGE2BQ13066 116 aa13.36□□□□□ -0.27
KCNC1-202ENST00000379472 SPSB3Q6PJ21 355 aa13.36□□□□□ -0.27
KCNC1-202ENST00000379472 NPIPB13A6NJU9 1138 aa13.36□□□□□ -0.27
KCNC1-202ENST00000379472 NPIPB5A8MRT5 1133 aa13.36□□□□□ -0.27
KCNC1-202ENST00000379472 FCN3O75636 299 aa13.36□□□□□ -0.27
KCNC1-202ENST00000379472 F8VVB4 439 aa13.36□□□□□ -0.27
KCNC1-202ENST00000379472 F8VWA3 439 aa13.36□□□□□ -0.27
KCNC1-202ENST00000379472 PVRIGQ6DKI7 326 aa13.36□□□□□ -0.27
KCNC1-202ENST00000379472 LHFPL6Q9Y693 200 aa13.36□□□□□ -0.27
KCNC1-202ENST00000379472 FXYD1O00168 92 aa13.35□□□□□ -0.27
KCNC1-202ENST00000379472 IGHG3P01860 377 aa13.35□□□□□ -0.27
KCNC1-202ENST00000379472 DUTP33316 252 aaKnown RBP13.35□□□□□ -0.27
KCNC1-202ENST00000379472 VMO1Q7Z5L0 202 aa13.35□□□□□ -0.27
KCNC1-202ENST00000379472 F2Z2F3 143 aa13.35□□□□□ -0.27
KCNC1-202ENST00000379472 SP7Q8TDD2 431 aaPredicted RBP13.35□□□□□ -0.27
KCNC1-202ENST00000379472 A0A1W2PPV9 198 aa13.35□□□□□ -0.27
KCNC1-202ENST00000379472 SIGMAR1Q99720 223 aa13.35□□□□□ -0.27
KCNC1-202ENST00000379472 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.35□□□□□ -0.27
KCNC1-202ENST00000379472 PLXNA1Q9UIW2 1896 aa13.35□□□□□ -0.27
KCNC1-202ENST00000379472 PAPPAQ13219 1627 aa13.35□□□□□ -0.27
KCNC1-202ENST00000379472 TRIOBPQ9H2D6 2365 aa13.34□□□□□ -0.27
KCNC1-202ENST00000379472 A0A1W2PQF6 199 aa13.34□□□□□ -0.27
KCNC1-202ENST00000379472 C4orf48Q5BLP8 95 aa13.34□□□□□ -0.27
KCNC1-202ENST00000379472 RNASE7Q9H1E1 156 aaKnown RBP13.34□□□□□ -0.27
KCNC1-202ENST00000379472 USP54Q70EL1 1684 aa13.34□□□□□ -0.27
KCNC1-202ENST00000379472 C5orf67F2Z3F1 127 aa13.34□□□□□ -0.27
KCNC1-202ENST00000379472 SSBP2P81877 361 aaPredicted RBP13.34□□□□□ -0.27
KCNC1-202ENST00000379472 RIPPLY2Q5TAB7 128 aa13.34□□□□□ -0.27
KCNC1-202ENST00000379472 ZNF831Q5JPB2 1677 aa13.34□□□□□ -0.27
KCNC1-202ENST00000379472 SRRM4A7MD48 611 aaKnown RBP13.34□□□□□ -0.27
KCNC1-202ENST00000379472 SEC11AP67812 179 aa13.34□□□□□ -0.27
KCNC1-202ENST00000379472 PRIMA1Q86XR5 153 aa13.34□□□□□ -0.27
KCNC1-202ENST00000379472 MESP2Q0VG99 397 aa13.34□□□□□ -0.27
KCNC1-202ENST00000379472 KLF5Q13887 457 aaPredicted RBP13.34□□□□□ -0.27
KCNC1-202ENST00000379472 GGACTQ9BVM4 153 aa13.34□□□□□ -0.27
KCNC1-202ENST00000379472 CD5P06127 495 aa13.33□□□□□ -0.27
KCNC1-202ENST00000379472 OR9G9P0C7N8 305 aa13.33□□□□□ -0.27
KCNC1-202ENST00000379472 TMEM133Q9H2Q1 129 aa13.33□□□□□ -0.27
KCNC1-202ENST00000379472 INAFM2P0DMQ5 153 aa13.33□□□□□ -0.28
KCNC1-202ENST00000379472 ZNF250P15622 560 aa13.33□□□□□ -0.28
KCNC1-202ENST00000379472 PLEKHB2Q96CS7 222 aa13.33□□□□□ -0.28
KCNC1-202ENST00000379472 A8MXK9 166 aa13.33□□□□□ -0.28
KCNC1-202ENST00000379472 GNLYP22749 145 aa13.33□□□□□ -0.28
KCNC1-202ENST00000379472 GAGE13Q4V321 117 aa13.33□□□□□ -0.28
KCNC1-202ENST00000379472 IGKV2-40A0A087WW87 121 aaPredicted RBP13.33□□□□□ -0.28
KCNC1-202ENST00000379472 IGKV2D-40P01614 121 aaPredicted RBP13.33□□□□□ -0.28
KCNC1-202ENST00000379472 FSTP19883 344 aa13.33□□□□□ -0.28
KCNC1-202ENST00000379472 FAM181AQ8N9Y4 354 aa13.33□□□□□ -0.28
KCNC1-202ENST00000379472 PCNX2A6NKB5 2137 aa13.33□□□□□ -0.28
KCNC1-202ENST00000379472 RPL15P61313 204 aaKnown RBP13.33□□□□□ -0.28
KCNC1-202ENST00000379472 MSRB3Q8IXL7 192 aa13.33□□□□□ -0.28
KCNC1-202ENST00000379472 ZCCHC24Q8N2G6 241 aaKnown RBP13.33□□□□□ -0.28
KCNC1-202ENST00000379472 AQP3Q92482 292 aa13.33□□□□□ -0.28
KCNC1-202ENST00000379472 C17orf98A8MV24 154 aa13.32□□□□□ -0.28
KCNC1-202ENST00000379472 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.32□□□□□ -0.28
KCNC1-202ENST00000379472 ALS2Q96Q42 1657 aa13.32□□□□□ -0.28
KCNC1-202ENST00000379472 NDPQ00604 133 aa13.32□□□□□ -0.28
KCNC1-202ENST00000379472 FOXL1Q12952 345 aa13.32□□□□□ -0.28
KCNC1-202ENST00000379472 NGFRP08138 427 aa13.32□□□□□ -0.28
KCNC1-202ENST00000379472 NDUFAF3Q9BU61 184 aa13.32□□□□□ -0.28
KCNC1-202ENST00000379472 CENPVL1A0A0U1RR11 272 aa13.32□□□□□ -0.28
KCNC1-202ENST00000379472 Q96M66 194 aa13.32□□□□□ -0.28
KCNC1-202ENST00000379472 TIMM23O14925 209 aa13.32□□□□□ -0.28
KCNC1-202ENST00000379472 CELA3AP09093 270 aa13.32□□□□□ -0.28
KCNC1-202ENST00000379472 ZNF236Q9UL36 1845 aa13.32□□□□□ -0.28
KCNC1-202ENST00000379472 ALPK2Q86TB3 2170 aa13.32□□□□□ -0.28
KCNC1-202ENST00000379472 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.32□□□□□ -0.28
KCNC1-202ENST00000379472 APCDD1LQ8NCL9 501 aa13.32□□□□□ -0.28
KCNC1-202ENST00000379472 PSG8Q9UQ74 426 aa13.32□□□□□ -0.28
KCNC1-202ENST00000379472 CXCL2P19875 107 aa13.31□□□□□ -0.28
KCNC1-202ENST00000379472 IGHV1-2P23083 117 aa13.31□□□□□ -0.28
KCNC1-202ENST00000379472 TMEM187Q14656 261 aa13.31□□□□□ -0.28
KCNC1-202ENST00000379472 WDYHV1Q96HA8 205 aa13.31□□□□□ -0.28
KCNC1-202ENST00000379472 NRXN3Q9Y4C0 1643 aa13.31□□□□□ -0.28
KCNC1-202ENST00000379472 APOC4P55056 127 aa13.31□□□□□ -0.28
KCNC1-202ENST00000379472 BRD3OSQ6XYD6 125 aa13.31□□□□□ -0.28
KCNC1-202ENST00000379472 TMEM144Q7Z5S9 345 aa13.31□□□□□ -0.28
KCNC1-202ENST00000379472 DEFB105AQ8NG35 78 aa13.31□□□□□ -0.28
KCNC1-202ENST00000379472 DSCR8Q96T75 97 aa13.31□□□□□ -0.28
KCNC1-202ENST00000379472 MPDZO75970 2070 aa13.31□□□□□ -0.28
KCNC1-202ENST00000379472 ATP5G3P48201 142 aa13.31□□□□□ -0.28
KCNC1-202ENST00000379472 H3BUX3 64 aa13.31□□□□□ -0.28
KCNC1-202ENST00000379472 C15orf32Q32M92 178 aa13.31□□□□□ -0.28
KCNC1-202ENST00000379472 CFHR5Q9BXR6 569 aa13.31□□□□□ -0.28
KCNC1-202ENST00000379472 B4DSR2 109 aa13.31□□□□□ -0.28
KCNC1-202ENST00000379472 TNFSF13O75888 250 aa13.31□□□□□ -0.28
KCNC1-202ENST00000379472 MIXL1Q9H2W2 232 aa13.31□□□□□ -0.28
KCNC1-202ENST00000379472 SAMD5Q5TGI4 173 aa13.31□□□□□ -0.28
KCNC1-202ENST00000379472 DOCK6Q96HP0 2047 aa13.3□□□□□ -0.28
KCNC1-202ENST00000379472 PEX11BO96011 259 aa13.3□□□□□ -0.28
KCNC1-202ENST00000379472 ASPHD2Q6ICH7 369 aa13.3□□□□□ -0.28
KCNC1-202ENST00000379472 SAA2-SAA4A0A096LPE2 208 aa13.3□□□□□ -0.28
KCNC1-202ENST00000379472 SAA2P0DJI9 122 aaPredicted RBP13.3□□□□□ -0.28
KCNC1-202ENST00000379472 CFHR1Q03591 330 aa13.3□□□□□ -0.28
KCNC1-202ENST00000379472 OR10W1Q8NGF6 305 aa13.3□□□□□ -0.28
KCNC1-202ENST00000379472 C12orf77C9JDV5 145 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms