RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 B3GALT5-AS1P59052 145 aa11.24□□□□□ -0.61
GPC6-201ENST00000377047 UQCR10Q9UDW1 63 aa11.24□□□□□ -0.61
GPC6-201ENST00000377047 GAGE10A6NGK3 116 aa11.24□□□□□ -0.61
GPC6-201ENST00000377047 J3QRE1 110 aa11.24□□□□□ -0.61
GPC6-201ENST00000377047 M0R1W7 72 aa11.24□□□□□ -0.61
GPC6-201ENST00000377047 CDX1P47902 265 aaPredicted RBP11.24□□□□□ -0.61
GPC6-201ENST00000377047 GAFA1Q96PS6 74 aa11.24□□□□□ -0.61
GPC6-201ENST00000377047 LILRA1O75019 489 aa11.23□□□□□ -0.61
GPC6-201ENST00000377047 ATP5LO75964 103 aa11.23□□□□□ -0.61
GPC6-201ENST00000377047 SOD3P08294 240 aa11.23□□□□□ -0.61
GPC6-201ENST00000377047 PPIFP30405 207 aaKnown RBP11.23□□□□□ -0.61
GPC6-201ENST00000377047 VGLL1Q99990 258 aa11.23□□□□□ -0.61
GPC6-201ENST00000377047 ST20Q9HBF5 79 aa11.23□□□□□ -0.61
GPC6-201ENST00000377047 TRGV11A0A075B6L2 103 aa11.23□□□□□ -0.61
GPC6-201ENST00000377047 C3orf56Q8N813 242 aa11.23□□□□□ -0.61
GPC6-201ENST00000377047 EPDR1Q9UM22 224 aa11.23□□□□□ -0.61
GPC6-201ENST00000377047 HIGD1CA8MV81 97 aa11.23□□□□□ -0.61
GPC6-201ENST00000377047 RPL35AP18077 110 aaKnown RBP11.23□□□□□ -0.61
GPC6-201ENST00000377047 HOXA5P20719 270 aa11.23□□□□□ -0.61
GPC6-201ENST00000377047 KLHL30-AS1Q8NEE0 82 aa11.23□□□□□ -0.61
GPC6-201ENST00000377047 RNASE7Q9H1E1 156 aaKnown RBP11.23□□□□□ -0.61
GPC6-201ENST00000377047 A0A1B0GW15 77 aa11.23□□□□□ -0.61
GPC6-201ENST00000377047 ERVH48-1M5A8F1 160 aa11.23□□□□□ -0.61
GPC6-201ENST00000377047 RPL15P61313 204 aaKnown RBP11.23□□□□□ -0.61
GPC6-201ENST00000377047 EFNB1P98172 346 aa11.23□□□□□ -0.61
GPC6-201ENST00000377047 ORMDL3Q8N138 153 aa11.23□□□□□ -0.61
GPC6-201ENST00000377047 RTTNQ86VV8 2226 aa11.23□□□□□ -0.61
GPC6-201ENST00000377047 FAM90A9PA6NNJ1 464 aa11.22□□□□□ -0.61
GPC6-201ENST00000377047 NDUFA3O95167 84 aa11.22□□□□□ -0.61
GPC6-201ENST00000377047 SRP19P09132 144 aaKnown RBP11.22□□□□□ -0.61
GPC6-201ENST00000377047 ARHGEF17Q96PE2 2063 aaPredicted RBP11.22□□□□□ -0.61
GPC6-201ENST00000377047 DPRXA6NFQ7 191 aa11.22□□□□□ -0.61
GPC6-201ENST00000377047 PSG8Q9UQ74 426 aa11.22□□□□□ -0.61
GPC6-201ENST00000377047 SOX21Q9Y651 276 aaPredicted RBP11.22□□□□□ -0.61
GPC6-201ENST00000377047 OVOL1O14753 267 aa11.22□□□□□ -0.61
GPC6-201ENST00000377047 CNTFRP26992 372 aa11.22□□□□□ -0.61
GPC6-201ENST00000377047 LYPD2Q6UXB3 125 aa11.22□□□□□ -0.61
GPC6-201ENST00000377047 MAPK1IP1LQ8NDC0 245 aa11.22□□□□□ -0.61
GPC6-201ENST00000377047 IZUMO1RA6ND01 250 aa11.22□□□□□ -0.61
GPC6-201ENST00000377047 E7EQL1 145 aa11.22□□□□□ -0.61
GPC6-201ENST00000377047 LCNL1Q6ZST4 164 aa11.22□□□□□ -0.61
GPC6-201ENST00000377047 ZNF329Q86UD4 541 aa11.22□□□□□ -0.61
GPC6-201ENST00000377047 OR9G4Q8NGQ1 327 aa11.22□□□□□ -0.61
GPC6-201ENST00000377047 ESPL1Q14674 2120 aa11.21□□□□□ -0.61
GPC6-201ENST00000377047 OOSP1A8MZH6 123 aa11.21□□□□□ -0.61
GPC6-201ENST00000377047 BUB1B-PAK6H3BSN5 160 aa11.21□□□□□ -0.61
GPC6-201ENST00000377047 CMC4P56277 68 aaPredicted RBP11.21□□□□□ -0.61
GPC6-201ENST00000377047 Q5PR19 223 aa11.21□□□□□ -0.61
GPC6-201ENST00000377047 SLC25A48Q6ZT89 311 aaKnown RBP11.21□□□□□ -0.61
GPC6-201ENST00000377047 TCF21O43680 179 aa11.21□□□□□ -0.61
GPC6-201ENST00000377047 PIP4P2Q8N4L2 257 aa11.21□□□□□ -0.61
GPC6-201ENST00000377047 FNDC1Q4ZHG4 1894 aaPredicted RBP11.21□□□□□ -0.62
GPC6-201ENST00000377047 DTX2Q86UW9 622 aa11.21□□□□□ -0.62
GPC6-201ENST00000377047 F8VVB4 439 aa11.21□□□□□ -0.62
GPC6-201ENST00000377047 F8VWA3 439 aa11.21□□□□□ -0.62
GPC6-201ENST00000377047 GFI1Q99684 422 aa11.21□□□□□ -0.62
GPC6-201ENST00000377047 TRAV5A0A0B4J249 113 aa11.2□□□□□ -0.62
GPC6-201ENST00000377047 RNF222A6NCQ9 220 aa11.2□□□□□ -0.62
GPC6-201ENST00000377047 C5orf63A6NC05 138 aa11.2□□□□□ -0.62
GPC6-201ENST00000377047 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.2□□□□□ -0.62
GPC6-201ENST00000377047 TEX38Q6PEX7 206 aa11.2□□□□□ -0.62
GPC6-201ENST00000377047 PNRC2Q9NPJ4 139 aaKnown RBP11.2□□□□□ -0.62
GPC6-201ENST00000377047 EFNB3Q15768 340 aa11.2□□□□□ -0.62
GPC6-201ENST00000377047 PMCHL2Q9BQD1 86 aa11.2□□□□□ -0.62
GPC6-201ENST00000377047 DPH3P1Q9H4G8 78 aa11.2□□□□□ -0.62
GPC6-201ENST00000377047 TCF20Q9UGU0 1960 aaKnown RBP11.2□□□□□ -0.62
GPC6-201ENST00000377047 NDPQ00604 133 aa11.2□□□□□ -0.62
GPC6-201ENST00000377047 FXYD7P58549 80 aa11.2□□□□□ -0.62
GPC6-201ENST00000377047 GFI1BQ5VTD9 330 aa11.2□□□□□ -0.62
GPC6-201ENST00000377047 IGKV2-40A0A087WW87 121 aaPredicted RBP11.19□□□□□ -0.62
GPC6-201ENST00000377047 IGKV2D-40P01614 121 aaPredicted RBP11.19□□□□□ -0.62
GPC6-201ENST00000377047 IFI27P40305 119 aaPredicted RBP11.19□□□□□ -0.62
GPC6-201ENST00000377047 KLF17Q5JT82 389 aaPredicted RBP11.19□□□□□ -0.62
GPC6-201ENST00000377047 VCX2Q9H322 139 aa11.19□□□□□ -0.62
GPC6-201ENST00000377047 TBL2Q9Y4P3 447 aaKnown RBP11.19□□□□□ -0.62
GPC6-201ENST00000377047 Q96MF0 132 aa11.19□□□□□ -0.62
GPC6-201ENST00000377047 CHCHD5Q9BSY4 110 aa11.19□□□□□ -0.62
GPC6-201ENST00000377047 RNF126Q9BV68 326 aa11.19□□□□□ -0.62
GPC6-201ENST00000377047 C5orf64Q2M2E5 130 aa11.19□□□□□ -0.62
GPC6-201ENST00000377047 MGAMO43451 1857 aa11.19□□□□□ -0.62
GPC6-201ENST00000377047 J3QKU1 62 aa11.19□□□□□ -0.62
GPC6-201ENST00000377047 JKAMPQ9P055 326 aa11.19□□□□□ -0.62
GPC6-201ENST00000377047 H0YJW9 148 aa11.19□□□□□ -0.62
GPC6-201ENST00000377047 RUSC1-AS1Q66K80 236 aa11.19□□□□□ -0.62
GPC6-201ENST00000377047 SAA4P35542 130 aa11.18□□□□□ -0.62
GPC6-201ENST00000377047 ALPK2Q86TB3 2170 aa11.18□□□□□ -0.62
GPC6-201ENST00000377047 TRBV7-1A0A0A6YYK4 115 aa11.18□□□□□ -0.62
GPC6-201ENST00000377047 ZNF688P0C7X2 276 aa11.18□□□□□ -0.62
GPC6-201ENST00000377047 CCL20P78556 96 aa11.18□□□□□ -0.62
GPC6-201ENST00000377047 ACTL10Q5JWF8 245 aa11.18□□□□□ -0.62
GPC6-201ENST00000377047 TMEM183AQ8IXX5 376 aa11.18□□□□□ -0.62
GPC6-201ENST00000377047 VWA8A3KMH1 1905 aa11.18□□□□□ -0.62
GPC6-201ENST00000377047 TICRRQ7Z2Z1 1910 aa11.18□□□□□ -0.62
GPC6-201ENST00000377047 SSBP4Q9BWG4 385 aaPredicted RBP11.18□□□□□ -0.62
GPC6-201ENST00000377047 ZSWIM8A7E2V4 1837 aa11.18□□□□□ -0.62
GPC6-201ENST00000377047 IGKV1D-17A0A075B6S4 117 aa11.18□□□□□ -0.62
GPC6-201ENST00000377047 PMS2P5A8MQ11 134 aa11.18□□□□□ -0.62
GPC6-201ENST00000377047 PSG1P11464 419 aa11.18□□□□□ -0.62
GPC6-201ENST00000377047 EVI2AP22794 236 aa11.18□□□□□ -0.62
GPC6-201ENST00000377047 TRBV7-9A0A0J9YWB2 115 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms