RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 H3BUX3 64 aa8.31□□□□□ -1.08
COL5A1-202ENST00000371820 TIMM23O14925 209 aa8.31□□□□□ -1.08
COL5A1-202ENST00000371820 FCGR3BO75015 233 aa8.31□□□□□ -1.08
COL5A1-202ENST00000371820 STAG3L2P0CL84 134 aa8.31□□□□□ -1.08
COL5A1-202ENST00000371820 STAG3L3P0CL85 134 aa8.31□□□□□ -1.08
COL5A1-202ENST00000371820 IGHV1-8P0DP01 117 aa8.31□□□□□ -1.08
COL5A1-202ENST00000371820 AREGP15514 252 aa8.31□□□□□ -1.08
COL5A1-202ENST00000371820 OR2B11Q5JQS5 317 aa8.31□□□□□ -1.08
COL5A1-202ENST00000371820 C11orf42Q8N5U0 333 aa8.31□□□□□ -1.08
COL5A1-202ENST00000371820 OR13A1Q8NGR1 328 aa8.31□□□□□ -1.08
COL5A1-202ENST00000371820 OR4X1Q8NH49 305 aa8.31□□□□□ -1.08
COL5A1-202ENST00000371820 SLC35E1Q96K37 410 aa8.31□□□□□ -1.08
COL5A1-202ENST00000371820 GAL3ST2Q9H3Q3 398 aa8.31□□□□□ -1.08
COL5A1-202ENST00000371820 C16orf95Q9H693 158 aa8.31□□□□□ -1.08
COL5A1-202ENST00000371820 TMEM167BQ9NRX6 74 aa8.31□□□□□ -1.08
COL5A1-202ENST00000371820 FOXA2Q9Y261 457 aaPredicted RBP8.31□□□□□ -1.08
COL5A1-202ENST00000371820 TGP01266 2768 aa8.3□□□□□ -1.08
COL5A1-202ENST00000371820 TRBV9A0A0B4J1U6 114 aa8.3□□□□□ -1.08
COL5A1-202ENST00000371820 M0R1X1 148 aa8.3□□□□□ -1.08
COL5A1-202ENST00000371820 VDAC2P45880 294 aaPredicted RBP8.3□□□□□ -1.08
COL5A1-202ENST00000371820 DLX6P56179 175 aa8.3□□□□□ -1.08
COL5A1-202ENST00000371820 TAS2R45P59539 299 aa8.3□□□□□ -1.08
COL5A1-202ENST00000371820 SSTP61278 116 aa8.3□□□□□ -1.08
COL5A1-202ENST00000371820 PAFAH1B2P68402 229 aa8.3□□□□□ -1.08
COL5A1-202ENST00000371820 RELBQ01201 579 aa8.3□□□□□ -1.08
COL5A1-202ENST00000371820 PYY3Q5JQD4 70 aa8.3□□□□□ -1.08
COL5A1-202ENST00000371820 MINOS1Q5TGZ0 78 aa8.3□□□□□ -1.08
COL5A1-202ENST00000371820 MRPL41Q8IXM3 137 aaKnown RBP8.3□□□□□ -1.08
COL5A1-202ENST00000371820 ZNF383Q8NA42 475 aa8.3□□□□□ -1.08
COL5A1-202ENST00000371820 OR11H6Q8NGC7 330 aa8.3□□□□□ -1.08
COL5A1-202ENST00000371820 OR4C13Q8NGP0 309 aa8.3□□□□□ -1.08
COL5A1-202ENST00000371820 LINC01006Q8NI28 216 aa8.3□□□□□ -1.08
COL5A1-202ENST00000371820 TMEM190Q8WZ59 177 aa8.3□□□□□ -1.08
COL5A1-202ENST00000371820 PACRGQ96M98 296 aaPredicted RBP8.3□□□□□ -1.08
COL5A1-202ENST00000371820 GPR61Q9BZJ8 451 aa8.3□□□□□ -1.08
COL5A1-202ENST00000371820 LINC00574Q9H8X3 128 aa8.3□□□□□ -1.08
COL5A1-202ENST00000371820 SLC25A22Q9H936 323 aa8.3□□□□□ -1.08
COL5A1-202ENST00000371820 MINOS1-NBL1R4GNA1 71 aa8.3□□□□□ -1.08
COL5A1-202ENST00000371820 PRKDCP78527 4128 aaKnown RBP8.3□□□□□ -1.08
COL5A1-202ENST00000371820 VWFP04275 2813 aa8.29□□□□□ -1.08
COL5A1-202ENST00000371820 KBTBD11-OT1A0A1B0GTJ5 212 aa8.29□□□□□ -1.08
COL5A1-202ENST00000371820 XKRY2A2RUG3 117 aa8.29□□□□□ -1.08
COL5A1-202ENST00000371820 LINC00473A8K010 186 aa8.29□□□□□ -1.08
COL5A1-202ENST00000371820 ODF3BA8MYP8 253 aa8.29□□□□□ -1.08
COL5A1-202ENST00000371820 C9JCJ5 164 aa8.29□□□□□ -1.08
COL5A1-202ENST00000371820 M0QZ24 198 aa8.29□□□□□ -1.08
COL5A1-202ENST00000371820 PHOX2AO14813 284 aa8.29□□□□□ -1.08
COL5A1-202ENST00000371820 IGKV1D-33P01593 117 aa8.29□□□□□ -1.08
COL5A1-202ENST00000371820 IGKV1-33P01594 117 aa8.29□□□□□ -1.08
COL5A1-202ENST00000371820 CGB3P0DN86 165 aa8.29□□□□□ -1.08
COL5A1-202ENST00000371820 CGB7P0DN87 165 aa8.29□□□□□ -1.08
COL5A1-202ENST00000371820 FABP4P15090 132 aa8.29□□□□□ -1.08
COL5A1-202ENST00000371820 BRWD1-AS2P59051 145 aa8.29□□□□□ -1.08
COL5A1-202ENST00000371820 CST9LP1Q5W188 147 aa8.29□□□□□ -1.08
COL5A1-202ENST00000371820 Q6ZSV7 163 aa8.29□□□□□ -1.08
COL5A1-202ENST00000371820 ZNF596Q8TC21 504 aa8.29□□□□□ -1.08
COL5A1-202ENST00000371820 CACNG8Q8WXS5 425 aa8.29□□□□□ -1.08
COL5A1-202ENST00000371820 CHRDL1Q9BU40 450 aa8.29□□□□□ -1.08
COL5A1-202ENST00000371820 CLEC7AQ9BXN2 247 aa8.29□□□□□ -1.08
COL5A1-202ENST00000371820 QTRT1Q9BXR0 403 aaKnown RBP8.29□□□□□ -1.08
COL5A1-202ENST00000371820 NPFFR1Q9GZQ6 430 aa8.29□□□□□ -1.08
COL5A1-202ENST00000371820 CALYQ9NYX4 217 aa8.29□□□□□ -1.08
COL5A1-202ENST00000371820 SLC45A2Q9UMX9 530 aa8.29□□□□□ -1.08
COL5A1-202ENST00000371820 PXMP4Q9Y6I8 212 aa8.29□□□□□ -1.08
COL5A1-202ENST00000371820 NOTCH1P46531 2555 aa8.29□□□□□ -1.08
COL5A1-202ENST00000371820 C15orf61A6NNL5 157 aa8.28□□□□□ -1.08
COL5A1-202ENST00000371820 NPY1RP25929 384 aa8.28□□□□□ -1.08
COL5A1-202ENST00000371820 GPX4P36969 197 aaPredicted RBP8.28□□□□□ -1.08
COL5A1-202ENST00000371820 CNN1P51911 297 aaKnown RBP8.28□□□□□ -1.08
COL5A1-202ENST00000371820 SUB1P53999 127 aaKnown RBP eCLIP8.28□□□□□ -1.08
COL5A1-202ENST00000371820 PROK1P58294 105 aa8.28□□□□□ -1.08
COL5A1-202ENST00000371820 YPEL3P61236 119 aaPredicted RBP8.28□□□□□ -1.08
COL5A1-202ENST00000371820 IQCJQ1A5X6 159 aa8.28□□□□□ -1.08
COL5A1-202ENST00000371820 ACTL10Q5JWF8 245 aa8.28□□□□□ -1.08
COL5A1-202ENST00000371820 PQLC2Q6ZP29 291 aa8.28□□□□□ -1.08
COL5A1-202ENST00000371820 SSX7Q7RTT5 188 aa8.28□□□□□ -1.08
COL5A1-202ENST00000371820 TCF23Q7RTU1 214 aa8.28□□□□□ -1.08
COL5A1-202ENST00000371820 REC114Q7Z4M0 266 aa8.28□□□□□ -1.08
COL5A1-202ENST00000371820 TPRX1Q8N7U7 411 aa8.28□□□□□ -1.08
COL5A1-202ENST00000371820 OR10G8Q8NGN5 311 aa8.28□□□□□ -1.08
COL5A1-202ENST00000371820 OR4A5Q8NH83 315 aa8.28□□□□□ -1.08
COL5A1-202ENST00000371820 OR2T6Q8NHC8 308 aa8.28□□□□□ -1.08
COL5A1-202ENST00000371820 RFESDQ8TAC1 157 aa8.28□□□□□ -1.08
COL5A1-202ENST00000371820 HIST1H2BLQ99880 126 aa8.28□□□□□ -1.08
COL5A1-202ENST00000371820 CITED1Q99966 193 aa8.28□□□□□ -1.08
COL5A1-202ENST00000371820 TMEM133Q9H2Q1 129 aa8.28□□□□□ -1.08
COL5A1-202ENST00000371820 TMEM140Q9NV12 185 aa8.28□□□□□ -1.08
COL5A1-202ENST00000371820 IDI2-AS1Q9NZ38 188 aa8.28□□□□□ -1.08
COL5A1-202ENST00000371820 TCF19Q9Y242 345 aa8.28□□□□□ -1.08
COL5A1-202ENST00000371820 TRAPPC1Q9Y5R8 145 aa8.28□□□□□ -1.08
COL5A1-202ENST00000371820 WNK1Q9H4A3 2382 aa8.28□□□□□ -1.08
COL5A1-202ENST00000371820 IGHV2-26A0A0B4J1V2 119 aa8.27□□□□□ -1.09
COL5A1-202ENST00000371820 ZNF320A2RRD8 509 aa8.27□□□□□ -1.09
COL5A1-202ENST00000371820 INS-IGF2F8WCM5 200 aa8.27□□□□□ -1.09
COL5A1-202ENST00000371820 OR9G9P0C7N8 305 aa8.27□□□□□ -1.09
COL5A1-202ENST00000371820 HTR1DP28221 377 aa8.27□□□□□ -1.09
COL5A1-202ENST00000371820 SSTR5P35346 364 aa8.27□□□□□ -1.09
COL5A1-202ENST00000371820 CEACAM3P40198 252 aa8.27□□□□□ -1.09
COL5A1-202ENST00000371820 LOXL3P58215 753 aa8.27□□□□□ -1.09
COL5A1-202ENST00000371820 RAB4BP61018 213 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms