RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 U3KQ87 197 aa2.8□□□□□ -1.96
MCF2-202ENST00000370573 NF1P21359 2839 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 FXYD6-FXYD2A0A087WZ82 144 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 DNAJC9-AS1A6NH13 148 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 C15orf61A6NNL5 157 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 E7EUB6 86 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 DEDDO75618 318 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 KBTBD11O94819 623 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 NDUFA3O95167 84 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 LY6G6DO95868 133 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 IFNA10P01566 189 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 FBP1P09467 338 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 CXCL2P19875 107 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 BRS3P32247 399 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 DYNLT3P51808 116 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 S100A10P60903 97 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 HSPE1P61604 102 aaKnown RBP2.79□□□□□ -1.96
MCF2-202ENST00000370573 TNFRSF9Q07011 255 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 FGL1Q08830 312 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 PRSS8Q16651 343 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 VMA21Q3ZAQ7 101 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 LGALSLQ3ZCW2 172 aaPredicted RBP2.79□□□□□ -1.96
MCF2-202ENST00000370573 C10orf55Q5SWW7 151 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 PRSS54Q6PEW0 395 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 ZNF429Q86V71 674 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 COMMD7Q86VX2 200 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 STPG2Q8N412 459 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 NANPQ8TBE9 248 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 MRPL53Q96EL3 112 aaKnown RBP2.79□□□□□ -1.96
MCF2-202ENST00000370573 CLCC1Q96S66 551 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 TSNAXQ99598 290 aaKnown RBP2.79□□□□□ -1.96
MCF2-202ENST00000370573 SSX3Q99909 188 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 ZNF430Q9H8G1 570 aaPredicted RBP2.79□□□□□ -1.96
MCF2-202ENST00000370573 GSN-AS1Q9NRJ2 163 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 C1RLQ9NZP8 487 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 METTL1Q9UBP6 276 aaKnown RBP2.79□□□□□ -1.96
MCF2-202ENST00000370573 CHTOPQ9Y3Y2 248 aaKnown RBP2.79□□□□□ -1.96
MCF2-202ENST00000370573 ZFHX3Q15911 3703 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 PIGBOS1A0A0B4J2F0 54 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 hDV102S1A0JD36 115 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 RNF222A6NCQ9 220 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 A6NDX4 124 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 FAM24AA6NFZ4 105 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 MSGN1A6NI15 193 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 HMSDA8MTL9 139 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 H3BUX3 64 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 NBR2O15453 112 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 SYNGR2O43760 224 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 SSSCA1O60232 199 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 GPR137BO60478 399 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 OR2F2O95006 317 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 IGHV4-59P01825 116 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 FAM106CPP0CH98 169 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 IAPPP10997 89 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 VDAC2P45880 294 aaPredicted RBP2.79□□□□□ -1.96
MCF2-202ENST00000370573 RPL8P62917 257 aaKnown RBP2.79□□□□□ -1.96
MCF2-202ENST00000370573 HES1Q14469 280 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 MMDQ15546 238 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 LY6EQ16553 131 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 LRRC75BQ2VPJ9 315 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 PDLIM3Q53GG5 364 aaPredicted RBP2.79□□□□□ -1.96
MCF2-202ENST00000370573 TMEM41BQ5BJD5 291 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 SPNS3Q6ZMD2 512 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 HSD17B13Q7Z5P4 300 aaPredicted RBP2.79□□□□□ -1.96
MCF2-202ENST00000370573 ZNF546Q86UE3 836 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 TMEM219Q86XT9 240 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 C9orf62Q8N4C0 152 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 Q8N9W7 124 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 OR52E5Q8NH55 327 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 OR4A5Q8NH83 315 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 THAP6Q8TBB0 222 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 VCX2Q9H322 139 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 PRNDQ9UKY0 176 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 TNFSF18Q9UNG2 199 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 TCF19Q9Y242 345 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 OR51B2Q9Y5P1 312 aa2.79□□□□□ -1.96
MCF2-202ENST00000370573 IGSF23A1L1A6 192 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 LINC01548A6NM66 108 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 NCBP2LA6PVI3 153 aaKnown RBP2.78□□□□□ -1.96
MCF2-202ENST00000370573 CEBPZOSA8MTT3 80 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 K7EQM0 130 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 ARPC5O15511 151 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 IFNA17P01571 189 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 C5orf64Q2M2E5 130 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 SAPCD1Q5SSQ6 148 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 PPP1R27Q86WC6 154 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 OR10W1Q8NGF6 305 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 VSTM2AQ8TAG5 236 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 DCUN1D4Q92564 292 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 SMIM8Q96KF7 97 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 OR4C12Q96R67 309 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 GPR61Q9BZJ8 451 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 NDUFA4L2Q9NRX3 87 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 MLXQ9UH92 298 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 NSD1Q96L73 2696 aaPredicted RBP2.78□□□□□ -1.96
MCF2-202ENST00000370573 MFSD2BA6NFX1 497 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 LINC00587B1AMM8 73 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 E5RGE8 158 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 CA2P00918 260 aa2.78□□□□□ -1.96
MCF2-202ENST00000370573 RLN2P04090 185 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms