RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 C1QBP02746 253 aa1.29□□□□□ -2.2
RNU6-28P-201ENST00000362378 MIFP14174 115 aa1.29□□□□□ -2.2
RNU6-28P-201ENST00000362378 PIGPP57054 158 aa1.29□□□□□ -2.2
RNU6-28P-201ENST00000362378 C10orf55Q5SWW7 151 aa1.29□□□□□ -2.2
RNU6-28P-201ENST00000362378 LYRM7Q5U5X0 104 aa1.29□□□□□ -2.2
RNU6-28P-201ENST00000362378 UNQ6190/PRO20217Q6UXQ8 127 aa1.29□□□□□ -2.2
RNU6-28P-201ENST00000362378 Q8N2B8 174 aa1.29□□□□□ -2.2
RNU6-28P-201ENST00000362378 LINC00471Q8N535 108 aa1.29□□□□□ -2.2
RNU6-28P-201ENST00000362378 OR8D4Q8NGM9 314 aa1.29□□□□□ -2.2
RNU6-28P-201ENST00000362378 FAM172AQ8WUF8 416 aa1.29□□□□□ -2.2
RNU6-28P-201ENST00000362378 CEP19Q96LK0 163 aa1.29□□□□□ -2.2
RNU6-28P-201ENST00000362378 SLC50A1Q9BRV3 221 aa1.29□□□□□ -2.2
RNU6-28P-201ENST00000362378 ADAT1Q9BUB4 502 aaKnown RBP1.29□□□□□ -2.2
RNU6-28P-201ENST00000362378 MED9Q9NWA0 146 aa1.29□□□□□ -2.2
RNU6-28P-201ENST00000362378 NHP2Q9NX24 153 aaKnown RBP1.29□□□□□ -2.2
RNU6-28P-201ENST00000362378 TAS2R4Q9NYW5 299 aa1.29□□□□□ -2.2
RNU6-28P-201ENST00000362378 RTTNQ86VV8 2226 aa1.29□□□□□ -2.2
RNU6-28P-201ENST00000362378 EIF3AQ14152 1382 aaKnown RBP1.29□□□□□ -2.2
RNU6-28P-201ENST00000362378 MYH11P35749 1972 aa1.28□□□□□ -2.2
RNU6-28P-201ENST00000362378 BRWD1Q9NSI6 2320 aa1.28□□□□□ -2.2
RNU6-28P-201ENST00000362378 C7orf71A4D174 169 aa1.28□□□□□ -2.2
RNU6-28P-201ENST00000362378 C1orf196B1AJZ1 125 aa1.28□□□□□ -2.2
RNU6-28P-201ENST00000362378 CLDN25C9JDP6 229 aa1.28□□□□□ -2.2
RNU6-28P-201ENST00000362378 CYB5BO43169 146 aa1.28□□□□□ -2.2
RNU6-28P-201ENST00000362378 BAALC-AS2P0C853 105 aa1.28□□□□□ -2.2
RNU6-28P-201ENST00000362378 RNASE3P12724 160 aaKnown RBP1.28□□□□□ -2.2
RNU6-28P-201ENST00000362378 ATP5G3P48201 142 aa1.28□□□□□ -2.2
RNU6-28P-201ENST00000362378 TSNQ15631 228 aaKnown RBP1.28□□□□□ -2.2
RNU6-28P-201ENST00000362378 HACD4Q5VWC8 232 aa1.28□□□□□ -2.2
RNU6-28P-201ENST00000362378 OR13D1Q8NGV5 346 aa1.28□□□□□ -2.2
RNU6-28P-201ENST00000362378 AQP3Q92482 292 aa1.28□□□□□ -2.2
RNU6-28P-201ENST00000362378 HIST1H2BLQ99880 126 aa1.28□□□□□ -2.2
RNU6-28P-201ENST00000362378 CCDC94Q9BW85 323 aaPredicted RBP1.28□□□□□ -2.2
RNU6-28P-201ENST00000362378 IL20Q9NYY1 176 aa1.28□□□□□ -2.2
RNU6-28P-201ENST00000362378 STOML2Q9UJZ1 356 aa1.28□□□□□ -2.2
RNU6-28P-201ENST00000362378 COL4A5P29400 1685 aa1.28□□□□□ -2.2
RNU6-28P-201ENST00000362378 KIF1BO60333 1816 aa1.28□□□□□ -2.2
RNU6-28P-201ENST00000362378 IGKV2-29A2NJV5 120 aaPredicted RBP1.27□□□□□ -2.21
RNU6-28P-201ENST00000362378 HMGB3O15347 200 aaKnown RBP1.27□□□□□ -2.21
RNU6-28P-201ENST00000362378 ASAH2BP0C7U1 165 aa1.27□□□□□ -2.21
RNU6-28P-201ENST00000362378 RNASE4P34096 147 aaKnown RBP1.27□□□□□ -2.21
RNU6-28P-201ENST00000362378 RRN3P1Q2M238 152 aa1.27□□□□□ -2.21
RNU6-28P-201ENST00000362378 PHF13Q86YI8 300 aaPredicted RBP1.27□□□□□ -2.21
RNU6-28P-201ENST00000362378 SERPINI1Q99574 410 aa1.27□□□□□ -2.21
RNU6-28P-201ENST00000362378 IMUPQ9GZP8 106 aa1.27□□□□□ -2.21
RNU6-28P-201ENST00000362378 OR5AC2Q9NZP5 309 aa1.27□□□□□ -2.21
RNU6-28P-201ENST00000362378 PYCARDQ9ULZ3 195 aa1.27□□□□□ -2.21
RNU6-28P-201ENST00000362378 PLXND1Q9Y4D7 1925 aa1.27□□□□□ -2.21
RNU6-28P-201ENST00000362378 TRAV14DV4A0A0A6YYC5 116 aa1.26□□□□□ -2.21
RNU6-28P-201ENST00000362378 TRAV1-1A0A0B4J248 108 aa1.26□□□□□ -2.21
RNU6-28P-201ENST00000362378 IFNA7P01567 189 aa1.26□□□□□ -2.21
RNU6-28P-201ENST00000362378 PDE6HQ13956 83 aa1.26□□□□□ -2.21
RNU6-28P-201ENST00000362378 CDK5R1Q15078 307 aa1.26□□□□□ -2.21
RNU6-28P-201ENST00000362378 C12orf29Q8N999 325 aa1.26□□□□□ -2.21
RNU6-28P-201ENST00000362378 SLAMF6Q96DU3 332 aa1.26□□□□□ -2.21
RNU6-28P-201ENST00000362378 HS3ST2Q9Y278 367 aa1.26□□□□□ -2.21
RNU6-28P-201ENST00000362378 DOCK3Q8IZD9 2030 aa1.26□□□□□ -2.21
RNU6-28P-201ENST00000362378 MIA2Q96PC5 1412 aa1.25□□□□□ -2.21
RNU6-28P-201ENST00000362378 SCN10AQ9Y5Y9 1956 aa1.25□□□□□ -2.21
RNU6-28P-201ENST00000362378 IGKV3D-7A0A0C4DH55 119 aa1.25□□□□□ -2.21
RNU6-28P-201ENST00000362378 IGKV3OR2-268A0A0C4DH90 116 aa1.25□□□□□ -2.21
RNU6-28P-201ENST00000362378 C2orf70A6NJV1 201 aa1.25□□□□□ -2.21
RNU6-28P-201ENST00000362378 UBL3O95164 117 aa1.25□□□□□ -2.21
RNU6-28P-201ENST00000362378 RHOBP62745 196 aa1.25□□□□□ -2.21
RNU6-28P-201ENST00000362378 RPL19P84098 196 aaKnown RBP1.25□□□□□ -2.21
RNU6-28P-201ENST00000362378 LINC00311Q8N616 119 aa1.25□□□□□ -2.21
RNU6-28P-201ENST00000362378 C15orf53Q8NAA6 179 aa1.25□□□□□ -2.21
RNU6-28P-201ENST00000362378 OR10J5Q8NHC4 309 aa1.25□□□□□ -2.21
RNU6-28P-201ENST00000362378 AP3S1Q92572 193 aa1.25□□□□□ -2.21
RNU6-28P-201ENST00000362378 SLC35A3Q9Y2D2 325 aa1.25□□□□□ -2.21
RNU6-28P-201ENST00000362378 SOX21Q9Y651 276 aaPredicted RBP1.25□□□□□ -2.21
RNU6-28P-201ENST00000362378 MUC6Q6W4X9 2439 aa1.25□□□□□ -2.21
RNU6-28P-201ENST00000362378 SBF1O95248 1867 aa1.24□□□□□ -2.21
RNU6-28P-201ENST00000362378 OR1I1O60431 355 aa1.24□□□□□ -2.21
RNU6-28P-201ENST00000362378 ATG12O94817 140 aa1.24□□□□□ -2.21
RNU6-28P-201ENST00000362378 MGST1P10620 155 aaKnown RBP1.24□□□□□ -2.21
RNU6-28P-201ENST00000362378 SRP14P37108 136 aaKnown RBP1.24□□□□□ -2.21
RNU6-28P-201ENST00000362378 SSR2P43308 183 aa1.24□□□□□ -2.21
RNU6-28P-201ENST00000362378 NCALDP61601 193 aa1.24□□□□□ -2.21
RNU6-28P-201ENST00000362378 EIF5AP63241 154 aaKnown RBP1.24□□□□□ -2.21
RNU6-28P-201ENST00000362378 RHOGP84095 191 aa1.24□□□□□ -2.21
RNU6-28P-201ENST00000362378 KRR1Q13601 381 aaKnown RBP1.24□□□□□ -2.21
RNU6-28P-201ENST00000362378 POU6F1Q14863 301 aa1.24□□□□□ -2.21
RNU6-28P-201ENST00000362378 BRMS1LQ5PSV4 323 aa1.24□□□□□ -2.21
RNU6-28P-201ENST00000362378 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.24□□□□□ -2.21
RNU6-28P-201ENST00000362378 Q6ZSA8 131 aa1.24□□□□□ -2.21
RNU6-28P-201ENST00000362378 TMED4Q7Z7H5 227 aa1.24□□□□□ -2.21
RNU6-28P-201ENST00000362378 LYG2Q86SG7 212 aa1.24□□□□□ -2.21
RNU6-28P-201ENST00000362378 C3orf56Q8N813 242 aa1.24□□□□□ -2.21
RNU6-28P-201ENST00000362378 OR2T10Q8NGZ9 312 aa1.24□□□□□ -2.21
RNU6-28P-201ENST00000362378 STAG3L4Q8TBR4 150 aa1.24□□□□□ -2.21
RNU6-28P-201ENST00000362378 REG4Q9BYZ8 158 aa1.24□□□□□ -2.21
RNU6-28P-201ENST00000362378 PRNDQ9UKY0 176 aa1.24□□□□□ -2.21
RNU6-28P-201ENST00000362378 UTP11Q9Y3A2 253 aaKnown RBP1.24□□□□□ -2.21
RNU6-28P-201ENST00000362378 BAZ2BQ9UIF8 2168 aaKnown RBP1.24□□□□□ -2.21
RNU6-28P-201ENST00000362378 ARHGEF28Q8N1W1 1705 aaKnown RBP1.23□□□□□ -2.21
RNU6-28P-201ENST00000362378 RIMBP3CA6NJZ7 1639 aa1.23□□□□□ -2.21
RNU6-28P-201ENST00000362378 RIMBP3BA6NNM3 1639 aa1.23□□□□□ -2.21
RNU6-28P-201ENST00000362378 RIMBP3Q9UFD9 1639 aa1.23□□□□□ -2.21
RNU6-28P-201ENST00000362378 HCRTO43612 131 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms