RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 PSMB11A5LHX3 300 aa13.22□□□□□ -0.29
PTPN11-201ENST00000351677 WISP1O95388 367 aa13.22□□□□□ -0.29
PTPN11-201ENST00000351677 TGFAP01135 160 aa13.22□□□□□ -0.29
PTPN11-201ENST00000351677 TIMP3P35625 211 aa13.22□□□□□ -0.29
PTPN11-201ENST00000351677 ERASQ7Z444 233 aa13.22□□□□□ -0.29
PTPN11-201ENST00000351677 ZNF600Q6ZNG1 722 aa13.22□□□□□ -0.29
PTPN11-201ENST00000351677 PVRIGQ6DKI7 326 aa13.22□□□□□ -0.29
PTPN11-201ENST00000351677 TEX38Q6PEX7 206 aa13.22□□□□□ -0.29
PTPN11-201ENST00000351677 MYOD1P15172 320 aa13.21□□□□□ -0.29
PTPN11-201ENST00000351677 Q6P435 159 aa13.21□□□□□ -0.29
PTPN11-201ENST00000351677 SCGB3A1Q96QR1 104 aa13.21□□□□□ -0.29
PTPN11-201ENST00000351677 VKORC1Q9BQB6 163 aa13.21□□□□□ -0.29
PTPN11-201ENST00000351677 OSTCQ9NRP0 149 aa13.21□□□□□ -0.29
PTPN11-201ENST00000351677 CLDN16Q9Y5I7 305 aa13.21□□□□□ -0.29
PTPN11-201ENST00000351677 COLCA2A8K830 154 aa13.21□□□□□ -0.29
PTPN11-201ENST00000351677 RHOGP84095 191 aa13.21□□□□□ -0.29
PTPN11-201ENST00000351677 ITLN2Q8WWU7 325 aaPredicted RBP13.21□□□□□ -0.29
PTPN11-201ENST00000351677 MEIG1Q5JSS6 88 aa13.21□□□□□ -0.29
PTPN11-201ENST00000351677 BEX4Q9NWD9 120 aaPredicted RBP13.21□□□□□ -0.29
PTPN11-201ENST00000351677 RPP25LQ8N5L8 163 aaKnown RBP13.21□□□□□ -0.3
PTPN11-201ENST00000351677 JOSD1Q15040 202 aaPredicted RBP13.21□□□□□ -0.3
PTPN11-201ENST00000351677 Q6AWC8 147 aa13.21□□□□□ -0.3
PTPN11-201ENST00000351677 ZNF256Q9Y2P7 627 aaPredicted RBP13.21□□□□□ -0.3
PTPN11-201ENST00000351677 LINC00473A8K010 186 aa13.2□□□□□ -0.3
PTPN11-201ENST00000351677 PPIFP30405 207 aaKnown RBP13.2□□□□□ -0.3
PTPN11-201ENST00000351677 C20orf204Q6ZNR8 217 aa13.2□□□□□ -0.3
PTPN11-201ENST00000351677 MGST2Q99735 147 aa13.2□□□□□ -0.3
PTPN11-201ENST00000351677 SMIM13P0DJ93 91 aa13.2□□□□□ -0.3
PTPN11-201ENST00000351677 GFI1BQ5VTD9 330 aa13.2□□□□□ -0.3
PTPN11-201ENST00000351677 PSG8Q9UQ74 426 aa13.2□□□□□ -0.3
PTPN11-201ENST00000351677 IGHV2-26A0A0B4J1V2 119 aa13.2□□□□□ -0.3
PTPN11-201ENST00000351677 CYB5R2Q6BCY4 276 aa13.2□□□□□ -0.3
PTPN11-201ENST00000351677 DERL1Q9BUN8 251 aa13.2□□□□□ -0.3
PTPN11-201ENST00000351677 ZNF672Q499Z4 452 aaPredicted RBP13.2□□□□□ -0.3
PTPN11-201ENST00000351677 LINC00527Q9UJ94 153 aa13.2□□□□□ -0.3
PTPN11-201ENST00000351677 TSC2P49815 1807 aa13.19□□□□□ -0.3
PTPN11-201ENST00000351677 PRR31Q5SQ13 230 aa13.19□□□□□ -0.3
PTPN11-201ENST00000351677 SEPSECSQ9HD40 501 aaKnown RBP13.19□□□□□ -0.3
PTPN11-201ENST00000351677 FABP5P3A8MUU1 101 aa13.19□□□□□ -0.3
PTPN11-201ENST00000351677 GLRX5Q86SX6 157 aa13.19□□□□□ -0.3
PTPN11-201ENST00000351677 DUX3Q96PT4 197 aa13.19□□□□□ -0.3
PTPN11-201ENST00000351677 HS3ST6Q96QI5 342 aa13.19□□□□□ -0.3
PTPN11-201ENST00000351677 A0A0G2JRQ6 117 aa13.19□□□□□ -0.3
PTPN11-201ENST00000351677 A0A1B0GW15 77 aa13.19□□□□□ -0.3
PTPN11-201ENST00000351677 UBE2CO00762 179 aa13.19□□□□□ -0.3
PTPN11-201ENST00000351677 COQ2Q96H96 371 aa13.19□□□□□ -0.3
PTPN11-201ENST00000351677 PRDM13Q9H4Q3 707 aa13.19□□□□□ -0.3
PTPN11-201ENST00000351677 TNFRSF18Q9Y5U5 241 aa13.19□□□□□ -0.3
PTPN11-201ENST00000351677 PPP1R17O96001 155 aa13.19□□□□□ -0.3
PTPN11-201ENST00000351677 PF4P02776 101 aa13.19□□□□□ -0.3
PTPN11-201ENST00000351677 CIRBPQ14011 172 aaKnown RBP13.19□□□□□ -0.3
PTPN11-201ENST00000351677 KIAA2026Q5HYC2 2103 aa13.19□□□□□ -0.3
PTPN11-201ENST00000351677 A0A1W2PRX2 142 aa13.19□□□□□ -0.3
PTPN11-201ENST00000351677 STAG3L3P0CL85 134 aa13.19□□□□□ -0.3
PTPN11-201ENST00000351677 NLRC5Q86WI3 1866 aa13.18□□□□□ -0.3
PTPN11-201ENST00000351677 ATP5LO75964 103 aa13.18□□□□□ -0.3
PTPN11-201ENST00000351677 NDUFA3O95167 84 aa13.18□□□□□ -0.3
PTPN11-201ENST00000351677 LEPP41159 167 aa13.18□□□□□ -0.3
PTPN11-201ENST00000351677 SUMO2P61956 95 aaKnown RBP13.18□□□□□ -0.3
PTPN11-201ENST00000351677 KLRD1Q13241 179 aa13.18□□□□□ -0.3
PTPN11-201ENST00000351677 TMEM178BH3BS89 294 aa13.18□□□□□ -0.3
PTPN11-201ENST00000351677 IGHV1-8P0DP01 117 aa13.18□□□□□ -0.3
PTPN11-201ENST00000351677 TMEM14EPQ6UXP3 125 aa13.18□□□□□ -0.3
PTPN11-201ENST00000351677 C8orf46Q8TAG6 207 aa13.18□□□□□ -0.3
PTPN11-201ENST00000351677 FOXL2NBQ6ZUU3 175 aa13.18□□□□□ -0.3
PTPN11-201ENST00000351677 DOCK8Q8NF50 2099 aa13.18□□□□□ -0.3
PTPN11-201ENST00000351677 RNASE1P07998 156 aaKnown RBP13.17□□□□□ -0.3
PTPN11-201ENST00000351677 SELENOKQ9Y6D0 94 aa13.17□□□□□ -0.3
PTPN11-201ENST00000351677 FBLN7Q53RD9 439 aa13.17□□□□□ -0.3
PTPN11-201ENST00000351677 ZNF524Q96C55 264 aa13.17□□□□□ -0.3
PTPN11-201ENST00000351677 GZMBP10144 247 aa13.17□□□□□ -0.3
PTPN11-201ENST00000351677 PAPPA-AS1Q5QFB9 102 aa13.17□□□□□ -0.3
PTPN11-201ENST00000351677 ZNF257Q9Y2Q1 563 aa13.17□□□□□ -0.3
PTPN11-201ENST00000351677 MOB4Q9Y3A3 225 aa13.17□□□□□ -0.3
PTPN11-201ENST00000351677 A0A0G2JNJ9 132 aa13.17□□□□□ -0.3
PTPN11-201ENST00000351677 HIST1H2BLQ99880 126 aa13.17□□□□□ -0.3
PTPN11-201ENST00000351677 PEF1Q9UBV8 284 aaKnown RBP13.17□□□□□ -0.3
PTPN11-201ENST00000351677 Q9UFV3 132 aa13.17□□□□□ -0.3
PTPN11-201ENST00000351677 IGKV1D-17A0A075B6S4 117 aa13.16□□□□□ -0.3
PTPN11-201ENST00000351677 TRAV1-1A0A0B4J248 108 aa13.16□□□□□ -0.3
PTPN11-201ENST00000351677 TMEM50AO95807 157 aa13.16□□□□□ -0.3
PTPN11-201ENST00000351677 TMEM262E9PQX1 116 aa13.16□□□□□ -0.3
PTPN11-201ENST00000351677 AGMATQ9BSE5 352 aa13.16□□□□□ -0.3
PTPN11-201ENST00000351677 TRBV6-6A0A0A6YYG2 114 aa13.16□□□□□ -0.3
PTPN11-201ENST00000351677 GNB1LQ9BYB4 327 aa13.16□□□□□ -0.3
PTPN11-201ENST00000351677 INTS1Q8N201 2190 aaKnown RBP13.16□□□□□ -0.3
PTPN11-201ENST00000351677 PI4KAP42356 2102 aa13.16□□□□□ -0.3
PTPN11-201ENST00000351677 Q6ZRM9 215 aa13.16□□□□□ -0.3
PTPN11-201ENST00000351677 NUDT10Q8NFP7 164 aa13.16□□□□□ -0.3
PTPN11-201ENST00000351677 NUDT11Q96G61 164 aa13.16□□□□□ -0.3
PTPN11-201ENST00000351677 TNFRSF14Q92956 283 aa13.15□□□□□ -0.3
PTPN11-201ENST00000351677 GAFA1Q96PS6 74 aa13.15□□□□□ -0.3
PTPN11-201ENST00000351677 SLC50A1Q9BRV3 221 aa13.15□□□□□ -0.3
PTPN11-201ENST00000351677 TRAV40A0A0B4J280 105 aa13.15□□□□□ -0.3
PTPN11-201ENST00000351677 H7C1H1 209 aa13.15□□□□□ -0.3
PTPN11-201ENST00000351677 NTF4P34130 210 aa13.15□□□□□ -0.3
PTPN11-201ENST00000351677 EXOC3-AS1Q8N2X6 119 aa13.15□□□□□ -0.3
PTPN11-201ENST00000351677 ASCL2Q99929 193 aa13.15□□□□□ -0.3
PTPN11-201ENST00000351677 SCRT1Q9BWW7 348 aa13.15□□□□□ -0.3
PTPN11-201ENST00000351677 LRRK1Q38SD2 2015 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms