RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP20.93■□□□□ 0.94
SSBP4-202ENST00000348495 GNG7O60262 68 aa20.93■□□□□ 0.94
SSBP4-202ENST00000348495 IGKV1-17P01599 117 aa20.93■□□□□ 0.94
SSBP4-202ENST00000348495 OR10J1P30954 320 aa20.93■□□□□ 0.94
SSBP4-202ENST00000348495 RUNX1Q01196 453 aa20.93■□□□□ 0.94
SSBP4-202ENST00000348495 KRTAP24-1Q3LI83 254 aa20.93■□□□□ 0.94
SSBP4-202ENST00000348495 HSD17B11Q8NBQ5 300 aa20.93■□□□□ 0.94
SSBP4-202ENST00000348495 TRGV9Q99603 122 aa20.93■□□□□ 0.94
SSBP4-202ENST00000348495 GAR1Q9NY12 217 aaKnown RBP20.93■□□□□ 0.94
SSBP4-202ENST00000348495 OR2T8A6NH00 312 aa20.92■□□□□ 0.94
SSBP4-202ENST00000348495 CLEC3BP05452 202 aa20.92■□□□□ 0.94
SSBP4-202ENST00000348495 CTSGP08311 255 aa20.92■□□□□ 0.94
SSBP4-202ENST00000348495 CD28P10747 220 aa20.92■□□□□ 0.94
SSBP4-202ENST00000348495 TPT1P13693 172 aaKnown RBP20.92■□□□□ 0.94
SSBP4-202ENST00000348495 GPR183P32249 361 aa20.92■□□□□ 0.94
SSBP4-202ENST00000348495 EIF5AP63241 154 aaKnown RBP20.92■□□□□ 0.94
SSBP4-202ENST00000348495 CLEC19AQ6UXS0 136 aa20.92■□□□□ 0.94
SSBP4-202ENST00000348495 BAP18Q8IXM2 172 aa20.92■□□□□ 0.94
SSBP4-202ENST00000348495 ST8SIA2Q92186 375 aa20.92■□□□□ 0.94
SSBP4-202ENST00000348495 GNB4Q9HAV0 340 aa20.92■□□□□ 0.94
SSBP4-202ENST00000348495 ATRQ13535 2644 aa20.92■□□□□ 0.94
SSBP4-202ENST00000348495 TRAV30A0A087WSZ9 112 aa20.92■□□□□ 0.94
SSBP4-202ENST00000348495 ZFP92A6NM28 416 aa20.92■□□□□ 0.94
SSBP4-202ENST00000348495 AGPAT2O15120 278 aa20.92■□□□□ 0.94
SSBP4-202ENST00000348495 ATP6V0CP27449 155 aa20.92■□□□□ 0.94
SSBP4-202ENST00000348495 ADMP35318 185 aa20.92■□□□□ 0.94
SSBP4-202ENST00000348495 RSG1Q9BU20 258 aa20.92■□□□□ 0.94
SSBP4-202ENST00000348495 GGTLC1Q9BX51 225 aa20.92■□□□□ 0.94
SSBP4-202ENST00000348495 CDX1P47902 265 aaPredicted RBP20.91■□□□□ 0.94
SSBP4-202ENST00000348495 CAMLGP49069 296 aa20.91■□□□□ 0.94
SSBP4-202ENST00000348495 WFDC12Q8WWY7 111 aa20.91■□□□□ 0.94
SSBP4-202ENST00000348495 TCRBV4S1A1TA0A5B7 111 aa20.9■□□□□ 0.94
SSBP4-202ENST00000348495 KRTAP10-3P60369 221 aa20.9■□□□□ 0.94
SSBP4-202ENST00000348495 ZNF90Q03938 601 aa20.9■□□□□ 0.94
SSBP4-202ENST00000348495 RAB31Q13636 194 aa20.9■□□□□ 0.94
SSBP4-202ENST00000348495 TIGITQ495A1 244 aa20.9■□□□□ 0.94
SSBP4-202ENST00000348495 CHRDL1Q9BU40 450 aa20.9■□□□□ 0.94
SSBP4-202ENST00000348495 SH3BGRL3Q9H299 93 aa20.9■□□□□ 0.94
SSBP4-202ENST00000348495 SLC45A2Q9UMX9 530 aa20.9■□□□□ 0.94
SSBP4-202ENST00000348495 RFNGQ9Y644 331 aa20.9■□□□□ 0.94
SSBP4-202ENST00000348495 TRBV12-3P01733 135 aa20.9■□□□□ 0.94
SSBP4-202ENST00000348495 LGALS1P09382 135 aaKnown RBP20.9■□□□□ 0.94
SSBP4-202ENST00000348495 FAM209BQ5JX69 171 aa20.9■□□□□ 0.94
SSBP4-202ENST00000348495 TMEM182Q6ZP80 229 aaPredicted RBP20.9■□□□□ 0.94
SSBP4-202ENST00000348495 GNPNAT1Q96EK6 184 aaPredicted RBP20.9■□□□□ 0.94
SSBP4-202ENST00000348495 TIMM9Q9Y5J7 89 aa20.9■□□□□ 0.94
SSBP4-202ENST00000348495 TGOLN2O43493 480 aa20.89■□□□□ 0.93
SSBP4-202ENST00000348495 CYP2G1PQ6ZSU1 146 aa20.89■□□□□ 0.93
SSBP4-202ENST00000348495 ZNF414Q96IQ9 312 aa20.89■□□□□ 0.93
SSBP4-202ENST00000348495 PSMG3Q9BT73 122 aaPredicted RBP20.89■□□□□ 0.93
SSBP4-202ENST00000348495 SPP1P10451 314 aa20.88■□□□□ 0.93
SSBP4-202ENST00000348495 SPSB3Q6PJ21 355 aa20.88■□□□□ 0.93
SSBP4-202ENST00000348495 C11orf44Q8N8P7 122 aa20.88■□□□□ 0.93
SSBP4-202ENST00000348495 OR5B12Q96R08 314 aa20.88■□□□□ 0.93
SSBP4-202ENST00000348495 CITED2Q99967 270 aaPredicted RBP20.88■□□□□ 0.93
SSBP4-202ENST00000348495 I3L521 148 aa20.87■□□□□ 0.93
SSBP4-202ENST00000348495 NUPL2O15504 423 aaKnown RBP20.87■□□□□ 0.93
SSBP4-202ENST00000348495 RPL29P47914 159 aaKnown RBP20.87■□□□□ 0.93
SSBP4-202ENST00000348495 YPEL3P61236 119 aaPredicted RBP20.87■□□□□ 0.93
SSBP4-202ENST00000348495 AWAT1Q58HT5 328 aa20.87■□□□□ 0.93
SSBP4-202ENST00000348495 HIST2H2BDQ6DRA6 164 aa20.87■□□□□ 0.93
SSBP4-202ENST00000348495 C18orf65Q6ZTR6 163 aa20.87■□□□□ 0.93
SSBP4-202ENST00000348495 PPP5D1E7EU14 171 aa20.87■□□□□ 0.93
SSBP4-202ENST00000348495 C17orf112F2Z3M2 114 aa20.87■□□□□ 0.93
SSBP4-202ENST00000348495 CFDP00746 253 aaPredicted RBP20.87■□□□□ 0.93
SSBP4-202ENST00000348495 PRR20EP86478 221 aa20.87■□□□□ 0.93
SSBP4-202ENST00000348495 PRR20CP86479 221 aa20.87■□□□□ 0.93
SSBP4-202ENST00000348495 PRR20DP86480 221 aa20.87■□□□□ 0.93
SSBP4-202ENST00000348495 PRR20BP86481 221 aa20.87■□□□□ 0.93
SSBP4-202ENST00000348495 PRR20AP86496 221 aa20.87■□□□□ 0.93
SSBP4-202ENST00000348495 ZNF709Q8N972 641 aa20.87■□□□□ 0.93
SSBP4-202ENST00000348495 C4orf3Q8WVX3 66 aa20.87■□□□□ 0.93
SSBP4-202ENST00000348495 SLC25A32Q9H2D1 315 aa20.87■□□□□ 0.93
SSBP4-202ENST00000348495 PEF1Q9UBV8 284 aaKnown RBP20.87■□□□□ 0.93
SSBP4-202ENST00000348495 ANKRD34BA5PLL1 514 aa20.86■□□□□ 0.93
SSBP4-202ENST00000348495 SCGB2A1O75556 95 aa20.86■□□□□ 0.93
SSBP4-202ENST00000348495 LINC00869P0C866 280 aa20.86■□□□□ 0.93
SSBP4-202ENST00000348495 ARL3P36405 182 aa20.86■□□□□ 0.93
SSBP4-202ENST00000348495 SELENOTP62341 195 aa20.86■□□□□ 0.93
SSBP4-202ENST00000348495 MIC13Q5XKP0 118 aa20.86■□□□□ 0.93
SSBP4-202ENST00000348495 BMPR1BO00238 502 aa20.85■□□□□ 0.93
SSBP4-202ENST00000348495 SEC11BP0C7V7 166 aa20.85■□□□□ 0.93
SSBP4-202ENST00000348495 GATA2P23769 480 aaPredicted RBP20.85■□□□□ 0.93
SSBP4-202ENST00000348495 STPG3Q8N7X2 389 aa20.85■□□□□ 0.93
SSBP4-202ENST00000348495 OR2G3Q8NGZ4 309 aa20.85■□□□□ 0.93
SSBP4-202ENST00000348495 TSSC4Q9Y5U2 329 aaPredicted RBP20.85■□□□□ 0.93
SSBP4-202ENST00000348495 PXMP4Q9Y6I8 212 aa20.85■□□□□ 0.93
SSBP4-202ENST00000348495 TOMM40O96008 361 aa20.84■□□□□ 0.93
SSBP4-202ENST00000348495 PSG1P11464 419 aa20.84■□□□□ 0.93
SSBP4-202ENST00000348495 KHDC1LQ5JSQ8 128 aa20.84■□□□□ 0.93
SSBP4-202ENST00000348495 BPIFCQ8NFQ6 507 aa20.84■□□□□ 0.93
SSBP4-202ENST00000348495 PHYHIPLQ96FC7 376 aa20.84■□□□□ 0.93
SSBP4-202ENST00000348495 KCNIP2Q9NS61 270 aa20.84■□□□□ 0.93
SSBP4-202ENST00000348495 FABP1P07148 127 aa20.84■□□□□ 0.93
SSBP4-202ENST00000348495 RD3LP0DJH9 198 aa20.84■□□□□ 0.93
SSBP4-202ENST00000348495 TMED6Q8WW62 240 aa20.84■□□□□ 0.93
SSBP4-202ENST00000348495 C19orf24Q9BVV8 132 aa20.84■□□□□ 0.93
SSBP4-202ENST00000348495 SERF2P84101 59 aa20.83■□□□□ 0.92
SSBP4-202ENST00000348495 ZNF616Q08AN1 781 aa20.83■□□□□ 0.92
SSBP4-202ENST00000348495 PLA2G2EQ9NZK7 142 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms